Ecological Modelling

Article	Citations
Spatiotemporal evolution of county level ecological security based on an emergy ecological footprint model: The case of Dingxi, China	224
Different degrees of decline in China's fishing efforts are beneficial to the sustainable development of coral reef fisheries resources on Yongxing Island China	136
A simulation model of functional habitat connectivity demonstrates the importance of species establishment in older forests	116
A computational modelling approach to human-elephant interactions in the Bunda District, Tanzania	95
Analysis of carbon emission drivers and peak carbon forecasts for island economies	57
Editorial Board	52
Chaotic mixotroph dynamics arise with nutrient loading: Implications for mixotrophy as a harmful bloom forming mechanism	51
Modeling transport and feeding of juvenile Kemp's ridley sea turtles on the West Florida shelf	51
Test of model of equivalence of tree height growth and transpiration rates in percolation-based phenomenology for root-soil interaction	50
The relationship between confidence intervals and distributions of estimators for parameters of deterministic models	50
Defining an ecological equation of state: Response to Riera et al. (2023)	49
An agent-based model of a cutaneous leishmaniasis reservoir host, Meriones shawi	46
Editorial Board	44
Using state-and-transition simulation models to scope post-fire success in restoring greater sage-grouse habitat	32
Impact of population growth and housing development on the riverine environment: Identifying environmental threat and solution in the Wanggu River, Indonesia	31
Integrating monitoring and optimization modeling to inform flow decisions for Chinook salmon smolts	31
Identification and analysis of areas prone to conflict with wild boar (Sus scrofa) in the vineyards of Malayer County, western Iran	31
Global sensitivity analysis of APSIM-wheat yield predictions to model parameters and inputs	29
When nitrate treatment wins the battle against microbial reservoir souring but loses the war	28
Yield estimation of Lycium barbarum L. based on the WOFOST model	27
The potential impacts of climate change on the distribution of key tree species and Cordyceps in Bhutan: Implications for ecological functions and rural livelihoods	27
Contrasting occupancy models with presence-only models: Does accounting for detection lead to better predictions?	25
Modelling PM10 removal in three Italian coastal Metropolitan Cities along a latitudinal gradient	25
Timing of Calanus finmarchicus diapause in stochastic environments	24
Ecological role of marine mammals in the Magellan Strait: Insights from trophic modeling	22

Using the ODD protocol and NetLogo to replicate agent-based models	22
Editorial Board	21
Retraction Notice to “Simulating fish passage impacts on a fragmented metapopulation of Paddlefish” [Ecological Modelling 495 (2024) 110806]	21
A tritrophic interaction model for an olive tree pest, the olive moth — Prays oleae (Bernard)	20
Factors affecting functional diversity of grassland vegetations	20
A multi-objective optimization model for cropland design considering profit, biodiversity, and ecosystem services	20
Fully Convolutional Neural Network: A solution to infer animal behaviours from multi-sensor data	20
A comparative study of production systems in the Goharkuh Taftan complex utilising emergy and economic analysis	20
A social media-based framework for quantifying temporal changes to wildlife viewing intensity	20
Bayesian networks facilitate updating of species distribution and habitat suitability models	20
Modeling nitrogen dynamics and biomass production in rice paddy fields of cold regions with the ORYZA-N model	20
Modelling the spatial shifts of functional groups in the Barents Sea using a climate-driven spatial food web model	20
Modeling the potential impacts of climate change on wheat yield in Iran: Evidence from national and provincial data analysis	19
Using system equalization principle to study the effects of multiple factors to the development of bee colony	19
Modelling of tuna around fish aggregating devices: The importance of ocean flow and prey	19
An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management	19
Editorial Board	19
Using individual-based modelling to investigate a pluralistic explanation for the prevalence of sexual reproduction in animal species	19
Optimizing greenhouse design for enhanced microalgae production: A CFD Analysis of microclimate and water thermal dynamics in raceway ponds	19
Editorial Board	19
Interdisciplinary design of a fish ramp using migration routes analysis	19
Modelling assessment of how small-scale vertical movements of infectious sea lice larvae can affect their large-scale distribution in fjordic systems	18
Analysis of a mathematical model for golden mussels infestation	18
Editorial Board	18
Editorial Board	18
Combining Revealed and Stated Preferences to design a new urban park in a metropolitan area of North-Western Italy	17
Editorial Board	17
Modelling species invasion using a metapopulation model with variable mortality and stochastic birth-death processes	17
Landscape ecology and urban spatial configuration: Exploring a methodological relationship. Application in Pelotas, Brazil	17
Editorial Board	17
A mathematical model of the impacts of climate change on the winter tick epizootic in moose	17
Editorial Board	16
Was Allosaurus really predominantly a scavenger?	16
Concerns regarding the proposal for an ecological equation of state: an assessment starting from the organic biophysics of ecosystems (OBEC).	16
Editorial Board	16
Investigating fishery and climate change effects on the conservation status of odontocetes in the Northern Ionian Sea (Central Mediterranean Sea)	16
Using thermodynamics to understand the links between energy, information, structure and biodiversity in a human-transformed landscape	16
Development of methods for the simplification of complex group built causal loop diagrams: A case study of the Rechna doab	16
Editorial Board	15
Quantifying root turnover in grasslands from biomass dynamics: Application of the growth-maintenance respiration paradigm and re-analysis of historical data	15
Transferability of tsetse habitat models between different regions in Kenya and Rwanda	15
An abstract mathematical model for sustainable harvesting of a biological species on the boundary of a protected habitat	15
Editorial Board	15
Background selection complexity influences Maxent predictive performance in freshwater systems	15
Modeling the biomass allocation of tree resprout in a fire-prone savanna	15
Resource objective wildfire leveraged to restore old growth forest structure while stabilizing carbon stocks in the southwestern United States	15
Larger territories reduce mortality risk for chimpanzees, wolves, and agents: Multiple lines of evidence in a model validation framework	14
Not going with the flow: Ecological niche of a migratory seabird, the South American Tern Sterna hirundinacea	14
Editorial Board	14
Mathematical modeling in behavior responses: The tendency-prediction based on a persistence model on real-time data	14

Editorial Board	14
Effects of a mobile disturbance pattern on dynamic patch networks and metapopulation persistence	14
Dynamic ammonia exchange within a mixed deciduous forest canopy in the Southern Appalachians	13
Sociability interacts with temporal environmental variation to spatially structure metapopulations: A fish dispersal simulation in an ephemeral landscape	13
Which rice farming system is more environmentally friendly in Khuzestan province, Iran? A study based on emergy analysis	13
Using the roughness height and manning number in hydrodynamic model to estimate the impact of intensive oyster aquaculture by floating & fixed rafts on water exchange with an application in Qinzho	13
A biocontrol agent as a commensal in a plant-pest interaction	13
Modeling primary production: Developing the BZI model from the production-irradiance (P-I) curves	13
An aridity threshold model of fire sizes and annual area burned in extensively forested ecoregions of the western USA	13
Correcting for size bias in electrofishing removal samples	13
Sensitivity of aboveground biomass and species composition to climate change in boreal forests of Northeastern China	13
Simplifying a complex computer model: Sensitivity analysis and metamodelling of an 3D individual-based crop-weed canopy model	13
Simulation of forest carbon fluxes by integrating remote sensing data into biome-BGC model	13
Individual-based modelling of adaptive physiological traits of cyanobacteria: Responses to light history	12
Sensitivity analysis of the FullCAM model: Context dependency and implications for model development to predict Australia's forest carbon stocks	12
Sensitivity analysis of a hydrodynamic and harmful algal model in a riverine system	12
Corrigendum to Insights into the environmental conditions contributing to variability in the larval recruitment of the tropical sardine Sardinella lemuru	12
Editorial Board	12
Managing pesticide resistance in Spodoptera frugiperda: A spatially explicit framework for identifying optimal treatment strategies	12
Effects of phenotypic plasticity on diversification rates and adaptive evolution in simulated environments with different climatic and cost contexts	12
Real-time assessment of live forest fuel moisture content and flammability by using space-time universal kriging	12
Sensitivity analysis of a crop metapopulation model	12
Projecting complex interactions between forest harvest and succession in the northern Acadian Forest Region	12
Patch spatial attributes and time to disturbance affect the emergence of source local populations within ephemeral habitats	12
Temporal transferability of species abundance models to study the changes of breeding bird species based on land cover changes	12
Snow runoff modelling in the upper Indus River Basin and its implication to energy water food nexus	12
Editorial Board	12
Spatial structure of natural boxwood and the invasive box tree moth can promote coexistence	12
Editorial Board	12
Methods for comparing theoretical models parameterized with field data using biological criteria and Sobol analysis	11
Novel challenges and opportunities in the theory and practice of matrix population modelling: An editorial for the special feature	11
Spatial E-PSR modelling for ecological sensitivity assessment for arid rangeland resilience and management	11
Handling missing data in ecological studies: Ignoring gaps in the dataset can distort the inference	11
lconnect R package: A versatile tool for evaluating landscape connectivity and prioritizing habitat patches in conservation research	11
Modeling collective motion for fish schooling via multi-agent reinforcement learning	11
Intrinsic timescales of variability in a marine plankton model	11
Reactive nitrogen losses from Canadian agricultural soils over 36 years	11
Forecasting impacts of biological control under future climates: mechanistic modelling of an aphid pest and a parasitic wasp	11
Calibration and validation of the AquaCrop model for production arrangements of forage cactus and grass in a semi-arid environment	11
Coexistence conditions in generalized discrete-time models of insect population dynamics	11
A review of computing models for studying population dynamics of giant panda ecosystems	11
Ecological modeling evaluates the potential impacts of symbionts on plant pathogen vectoring in field populations	10
Pan-Atlantic 3D distribution model incorporating water column for commercial fish	10
TransparC2U–A two-pool, pedology oriented forest soil carbon simulation model aimed at user investigations of multiple uncertainties	10
Quantifying greenhouse gas emissions in agricultural systems: a comparative analysis of process models	10
Effects of joint invasion: How co-invaders affect each other's success in model food webs?	10
Extreme capital breeding for giants: Effects of body size on humpback whale energy expenditure and fasting endurance	10
Study of a factored general logistic model of population dynamics with inter- and intraspecific interactions	10
Modeling lives saved from extreme heat by urban tree cover✰	10
Ecological flow considering hydrological season and habitat suitability for a variety of fish	10
Dynamic simulation study of soil erosion intensity on slopes with different vegetation patterns in pisha sandstone area	10
Modeling the bioenergetics of two herbivorous fish species in the Mediterranean Sea: The native Sarpa salpa and the invasive Siganus rivulatus	10
Increased unpredictability in spruce budworm outbreaks following habitat loss and landscape fragmentation	10
Consequences of intraspecific competition for floral resources in heterogeneous landscapes for eusocial bees	10
A Bayesian approach to projecting forest dynamics and related uncertainty: An application to continuous cover forests	10
Evaluating the skill of correlative species distribution models trained with mechanistic model output	10
Combined climate and regional mosquito habitat model based on machine learning	10
Comparing risk of chronic wasting disease occurrence using Bayesian hierarchical spatial models and different surveillance types	10
Modeling watershed carbon dynamics as affected by land cover change and soil erosion	10
Identifying influential parameters of a multi-species fish size spectrum model for a northern temperate lake through sensitivity analyses	9
A protocol for implementing parameter sensitivity analyses in complex ecosystem models	9
A bioenergetics model for seasonal growth of Indian oil sardine (Sardinella longiceps) in the Indian west coast	9
Improving 3-PG calibration and parameterization using artificial neural networks	9
TVDI-based water stress coefficient to estimate net primary productivity in soybean areas	9
Promoting coordinated development of the fertilizer production-crop plantation combined system through an integrated approach	9
Spatially weak syncronization of spreading pattern between Aedes Albopictus and dengue fever	9
A new model formulation for host depletion in parasitoids	9
Modelling the spread of a novel endosymbiont infection in field populations of an aphid pest	9
Changes in soil carbon stocks under plantation systems and natural forests in Northeast India	9
Improving species distribution models for dominant trees in climate data-poor forests using high-resolution remote sensing	9
Population projections from holey matrices: Using prior information to estimate rare transition events	9
Plant competition under simultaneous adaptation by herbivores and pollinators	9
Differentially biased sampling strategies reveal the non-stationarity of species distribution models for Indian small felids	9
Modelling farmland dynamics in response to farmer decisions using an advanced irrigation-related agent-based model	9
On the use of ABACUS high resolution glider observations for the assessment of phytoplankton ocean biomass from CMEMS model products	9
Using citizen data in a population model to estimate population size of moose (Alces alces)	9
Utilization of the DNDC model to estimate yield and CO2 and CH4 emissions in a cotton-wheat rotation under the influence of various tillage treatments	9
From known to unknown unknowns through pattern-oriented modelling: Driving research towards the Medawar zone	9
Pairwise learning for predicting pollination interactions based on traits and phylogeny	9
Predicting methane emissions from paddy rice soils under biochar and nitrogen addition using DNDC model	9

Merging empirical and mechanistic approaches to modeling aquatic visual foraging using a generalizable visual reaction distance model	9
A model of seasonal variation in somatic growth rates applied to two temperate turtle species	9
Analysis of the sustainability index for ecologically low-input integrated farming: A comprehensive assessment of environmental, economic, and social impact	9
Correcting for the effects of class imbalance improves the performance of machine-learning based species distribution models	9
Trade-offs in resource access and health by avoidance of self-fouling, motivated via disgust	9
A spatially implicit model fails to predict the structure of spatially explicit metacommunities under high dispersal	9
Species distribution models applied to mosquitoes: Use, quality assessment, and recommendations for best practice	9
Landscape-scale drivers of endangered Cape Sable Seaside Sparrow (Ammospiza maritima mirabilis) presence using an ensemble modeling approach	9
Multi-sectoral analysis of smarter urban nitrogen metabolism: A case study of Suzhou, China	8
Simulating biotic disturbance responses in forests requires a balance of model performance, complexity, and accessibility	8
Improving forest gross primary productivity estimation through climate and trait integration	8
A curated list of R packages for ecological niche modelling	8
An integrated modeling approach to predict trophic state changes in a large Brazilian reservoir	8
Field observation and numerical modelling of supersaturated dissolved gas at river confluence	8
Development and parameterization of a data likelihood model for geolocation of a bentho-pelagic fish in the North Pacific Ocean	8
Machine-learning modeling on tree mortality and growth reduction of temperate forests with climatic and ecophysiological parameters	8
Cumulative reproduction model to quantify the production of the invasive species Arctodiaptomus dorsalis (Calanoida, Copepoda)	8
Vegetation pattern formation in Daisyworld model with greenhouse effect	8
Comparison of spring phenology simulation in central Asian grasslands	8
Corrigendum to “Spatial mechanistic modelling to simulate movements and contacts between wildlife and livestock in Southern Africa” [ecological modelling 498 (2024) /110863]	8
Modeling the impacts of temperature during nesting seasons on Loggerhead (Caretta caretta) Sea Turtle populations in South Florida	8
Wetland carbon models: Applications for wetland carbon commercialization	8
Modeling Ganges river dolphin distribution and prioritizing areas for efficient conservation planning- a range-wide assessment	8
Modified framework to reflect contribution of soil storage in emergy synthesis under different agricultural practices at farm level	8
Modelling the effects of copepod diel vertical migration and community structure on ocean carbon flux using an agent-based model	8
Effect of agricultural landscape pattern on the qualitative food web of epigaeic arthropods in low hilly areas of northern China	8
Spatial patterns of correlation between conspecific species and size diversity in forest ecosystems	8
RETRACTED: Simulating fish passage impacts on a fragmented metapopulation of Paddlefish	8
Challenges, tasks, and opportunities in modeling agent-based complex systems	8
The increasing contribution of greening to the terrestrial evapotranspiration in China	8
Bumble bee pollination and the wildflower/crop trade-off: When do wildflower enhancements improve crop yield?	8
Corrigendum to ‘potential elevation shift of oriental beech (fagus orientalis L.) in hyrcanian mixed forest ecoregion under future global warming’	8
Modeling the effects of plant resistance, herbivore virulence, and parasitism, on the population dynamics of aphids and parasitoids in wheat and soybean in different climates	8
Multimedia fates and ecological risk control strategies of phthalic acid esters in a lake recharged by reclaimed water using the QWASI fugacity model	8
Integrating resource memory and cue-based territoriality to simulate movement dynamics: a process-explicit and pattern-oriented approach	8
Nonlinear impacts of climate change on dengue transmission in mainland China: Underlying mechanisms and future projection	8
“Teaching ‘Process Ecology’ at the Undergraduate Level: A Curricular Response to a Latent Yearning for an Ecologically-Based Understanding of Transdisciplinary Realities”	7
Development and application of a bioenergetics growth model for multiple early life stages of an ecologically important marine fish	7
Editorial Board	7
Data-driven agent-based model building for animal movement through Exploratory Data Analysis	7
How sustainable development goals have transformed our world? Evolution of the ecological networks of the Italian economy	7
The appropriate analytical solution for coupled leaf photosynthesis and stomatal conductance models for C3 plants	7
Atlantis Ecosystem Model Summit 2022: Report from a workshop	7
Assessing food limitation for marine juvenile fishes in coastal nurseries using a bioenergetic approach	7
Assessing bivalve growth using bio-energetic models	7
Editorial Board	7
Editorial Board	7
Editorial Board	7
Social-ecological systems modelling to understand the linkages between water, agriculture and rural systems,	7
Resilience, indirect effects and cycling in ecological networks	7
Quantifying the overall effect of biotic interactions on species distributions along environmental gradients	7
Simulations and interpretations of cumulative trophic theory	7
Predation on schooling fish is shaped by encounters between prey during school formation using an Ideal Gas Model of animal movement	7
Quantifying the per-capita contribution of all components of a migratory cycle: A modelling framework	7
Information sharing promotes bacterial diversity in oligotrophic environment with low-dose X-ray radiation based on modeling and simulation of agent-based model	7
Improved simulation of plant-animal interactions in African savannas with the extended land use change model LUCIA	7
Editorial Board	7
A step towards the integration of spatial dynamics in population dynamics models: Eastern Bering Sea snow crab as a case study	7
Modelling managed forest ecosystems in Sweden: An evaluation from the stand to the regional scale	7
Understanding and assessing demographic (in)equity resulting from extreme heat and direct sunlight exposure due to lack of tree canopies in Norfolk, VA using agent-based modeling	7
Analysis of simulated trap counts arising from correlated and biased random walks	7
‘metrix’: An R package for assessing the biological quality of water	7
Modeling opportunistic exploitation: increased extinction risk when targeting more than one species	6
Interpreting stoichiometric homeostasis and flexibility of soil microbial biomass carbon, nitrogen, and phosphorus	6
Permafrost environment evaluation of Qinghai-Tibetan Plateau based on DPSRC theory and system dynamics	6
Toward a framework for the multimodel ensemble prediction of soil nitrogen losses	6
Using structural equation models (SEM) to link climate change, forest composition, deer, and outdoor recreation	6
Simulating the effects of aquatic avifauna on the Phosphorus dynamics of aquatic systems	6
Exploring physiological constraints on life-history traits using Dynamic Energy Budgets	6
Simulating implications of fish behavioral response for managing hypoxia in estuaries with spatial dissolved oxygen variability	6
Separating acoustic signal into underlying behaviors with self-exciting point process models	6
Modeling biogeochemical processes in a freshwater lake during the spring thermal bar	6
Vibrio vulnificus infections from water exposure in the Chesapeake Bay: Are they predictable?	6
Assessment and a review of research on surface water quality modeling	6
Sequential Monte-Carlo algorithms for Bayesian model calibration – A review and method comparison✰	6
Modelling past and future impacts of droughts on tree mortality and carbon storage in Norway spruce stands in Germany	6
Modeling landscape wind erosion processes on rangelands using the APEX model	6
Modelling arthropod active dispersal using Partial differential equations: the case of the mosquito Aedes albopictus	6
Use of remote sensing and bio-geochemical models to estimate the net carbon fluxes of managed mountain grasslands	6
Warm Thanks to Dr. Brian D. Fath	6
Retraction note to “Exploring and forecasting spatial and temporal patterns of fire hazard risk in Nepal's tiger conservation zones” [Ecological Modelling 476 (2023) 1–12/110244]	6
Modelling the influence of mechanical-ecohydrological feedback on the nonlinear dynamics of peatlands	6
Reconsidering the Price equation: Benchmarking the analytical power of additive partitioning in ecology	6
Effect of variation in the observations on the prediction uncertainty in crop model simulation: Use ORYZA (v3) as a case study	6
Modelling parasite-produced marine diseases: The case of the mass mortality event of Pinna nobilis	6
Corrigendum to “How can oak regeneration in the Leipzig Floodplain Forest be effectively supported by femel plantations? Application of a demographic forest model” [Ecological Modelling 499 (2025) 110	6
Vorticity preference of the Yangtze finless porpoise (Neophocaena asiaeorientalis) during the dry season at the Wanhe River Estuary confluence	6
Performance of a process-based model for predicting robusta coffee yield at the regional scale in Vietnam	6
Computational assessment of Amazon forest plots regrowth capacity under strong spatial variability for simulating logging scenarios	6
Modeling the impact of invasive species litter on conditions affecting its spread and potential regime shift	6
Estimation of lake-scale stock-recruitment models for Great Lakes sea lampreys	6
Editorial Board	6
Agent-based modeling to evaluate the effects of harvesting biomass and hunting on ring-necked pheasant (Phasianus colchicus) populations	6
Stochastic agent-based model for predicting turbine-scale raptor movements during updraft-subsidized directional flights	6
Computer simulation modelling of the simultaneous adsorption of Cd, Cu and Cr from aqueous solutions by agricultural clay soil: A PHREEQC geochemical modelling code coupled to parameter estimation (PE	6