Ecological Modelling

Article	Citations
Want to model a species niche? A step-by-step guideline on correlative ecological niche modelling	177
Spatial cross-validation is not the right way to evaluate map accuracy	109
A model of Sustainable Development Goals: Challenges and opportunities in promoting human well-being and environmental sustainability	97
Challenges, tasks, and opportunities in modeling agent-based complex systems	82
Projecting effects of land use change on human well-being through changes in ecosystem services	69
A Production–Living–Ecological Space Model for Land-Use Optimisation: A case study of the core Tumen River region in China	53
Operationalising resilience: A methodological framework for assessing urban resilience through System Dynamics Model	51
A functional size-spectrum model of the global marine ecosystem that resolves zooplankton composition	51
Spatiotemporal differentiation of coupling coordination degree between economic development and water environment and its influencing factors using GWR in China's province	50
Microclimc: A mechanistic model of above, below and within-canopy microclimate	48
Long-term assessment of land-use and climate change on water scarcity in an arid basin in Iran	48
Determining agricultural suitable land in peri-urban geography using GIS and Multi Criteria Decision Analysis (MCDA) techniques	46
Dynamic simulation patterns and spatiotemporal analysis of land-use/land-cover changes in the Wuhan metropolitan area, China	45
Rice plant disease classification using dilated convolutional neural network with global average pooling	44
Assessment and a review of research on surface water quality modeling	39
The Chesapeake Bay program modeling system: Overview and recommendations for future development	39
Facilitation and competition reduction in tree species mixtures in Central Europe: Consequences for growth modeling and forest management	31
Evaluating old community renewal based on emergy analysis: A case study of Nanjing	31
Agricultural land use and the sustainability of social-ecological systems	30
The impact of data quality filtering of opportunistic citizen science data on species distribution model performance	29
Using species distribution models only may underestimate climate change impacts on future marine biodiversity	28
Sensitivity analysis using Morris: Just screening or an effective ranking method?	28
Ecological carrying capacity and sustainability assessment for coastal zones: A novel framework based on spatial scene and three-dimensional ecological footprint model	25
The effect of green roofs on the reduction of mortality due to heatwaves: Results from the application of a spatial microsimulation model to four European cities	25
Adaptability analysis of water pollution and advanced industrial structure in Jiangsu Province, China	25

Investigating the impact of the mycorrhizal inoculum on the resident fungal community and on plant growth	25
Modeling air quality regulation by green infrastructure in a Mediterranean coastal urban area: The removal of PM10 in the Metropolitan City of Naples (Italy)	23
Extending community trajectory analysis: New metrics and representation	23
A curated list of R packages for ecological niche modelling	23
Estimating slope stability by the root reinforcement mechanism of Artemisia sacrorum on the Loess Plateau of China	22
A novel spatio-temporal cellular automata model coupling partitioning with CNN-LSTM to urban land change simulation	21
The effect of tourism on teleconnected ecosystem services and urban sustainability: An emergy approach	21
Farm monitoring and disease prediction by classification based on deep learning architectures in sustainable agriculture	21
Modeling lives saved from extreme heat by urban tree cover✰	20
Choice of climate data affects the performance and interpretation of species distribution models.	20
Spatial E-PSR modelling for ecological sensitivity assessment for arid rangeland resilience and management	20
Research progress and hotspot analysis for reactive nitrogen flows in macroscopic systems based on a CiteSpace analysis	20
Modelling human influences on biodiversity at a global scale–A human ecology perspective	20
Construction of ecological security pattern based on ecological carrying capacity assessment 1990–2040: A case study of the Southwest Guangxi Karst - Beibu Gulf	19
Environmental convergence and environmental Kuznets curve: A unified empirical framework	19
Ecological risk assessment of heavy metal contamination of mining area soil based on land type changes: An information network environ analysis	19
Changes in soil carbon stocks under plantation systems and natural forests in Northeast India	19
Integrated impacts of vegetation and soil type on slope stability: A case study of Kheyrud Forest, Iran	19
Modelling the trophic roles of the demersal Chondrichthyes in the Northern Ionian Sea (Central Mediterranean Sea)	19
Spatiotemporal changes of ecosystem services value by incorporating planning policies: A case of the Pearl River Delta, China	18
Ecosystem based multi-species management using Empirical Dynamic Programming	18
A hierarchical framework for mapping pollination ecosystem service potential at the local scale	18
Modeling soil porewater salinity in mangrove forests (Everglades, Florida, USA) impacted by hydrological restoration and a warming climate	18
Modelling of land-use/cover change trajectories in a transboundary catchment of the Sio-Malaba-Malakisi Region in East Africa using the CLUE-s model	18
Estimating the fundamental niche: Accounting for the uneven availability of existing climates in the calibration area	18
Integrating dynamic plant growth models and microclimates for species distribution modelling	18
High spatial resolution bioclimatic variables to support ecological modelling in a Mediterranean biodiversity hotspot	18
The coordination between maritime economies and marine carrying capacity and their spatiotemporal evolution in the cities of the bohai rim in china	18
Ecological network identification and connectivity robustness evaluation in the Yellow River Basin under a multi-scenario simulation	17
Searching for ecology in species distribution models in the Himalayas	17
A new nearest-neighbour index for monitoring spatial size diversity: The hyperbolic tangent index	17
Performance of a process-based model for predicting robusta coffee yield at the regional scale in Vietnam	17
Impacts of climate change on biological rotation of Larix olgensis plantations for timber production and carbon storage in northeast China using the 3-PGmix model	17
The economics of territory selection	17
Fine-tuning niche models matters in invasion ecology. A lesson from the land planarian Obama nungara.	17
Defaunation and changes in climate and fire frequency have synergistic effects on aboveground biomass loss in the brazilian savanna	17
Changes in algal bloom dynamics in a regulated large river in response to eutrophic status	17
Generalized stability conditions for host–parasitoid population dynamics: Implications for biological control	17
The impact of converting waste into resources on the regional economy, evidence from Poland	17
Population dynamics of Varroa mite and honeybee: Effects of parasitism with age structure and seasonality	17
A scenario-based approach to tackle trade-offs between biodiversity conservation and land use pressure in Central Italy	16
A spatially explicit population model to compare management using culling and fertility control to reduce numbers of grey squirrels	16
Modelling the effectiveness of collaborative schemes for disease and pest outbreak prevention	16
Computer simulation modelling of the simultaneous adsorption of Cd, Cu and Cr from aqueous solutions by agricultural clay soil: A PHREEQC geochemical modelling code coupled to parameter estimation (PE	16
Using the Dynamic Energy Budget theory to evaluate the bioremediation potential of the polychaete Hediste diversicolor in an integrated multi-trophic aquaculture system	16
Exploring the option space for land system futures at regional to global scales: The diagnostic agro-food, land use and greenhouse gas emission model BioBaM-GHG 2.0	15
Using the standard DEB animal model for toxicokinetic-toxicodynamic analysis	15
Modeling Potential production and yield gap of potato using modelling and GIS approaches	15
An agent-based model to simulate the boosted Sterile Insect Technique for fruit fly management	15
RESTREND-based assessment of factors affecting vegetation dynamics on the Mongolian Plateau	15

A general ODE-based model to describe the physiological age structure of ectotherms: Description and application to Drosophila suzukii	15
The increasing contribution of greening to the terrestrial evapotranspiration in China	15
Fully Convolutional Neural Network: A solution to infer animal behaviours from multi-sensor data	15
Sustainable agriculture, food security and diet diversity. The case study of Tuscany, Italy.	15
Identifying key landscape pattern indices influencing the NPP: A case study of the upper and middle reaches of the Yellow River	15
Integrated ecosystem impacts of climate change and eutrophication on main Baltic fishery resources	15
Agroecological modeling of nitrogen and carbon transfers between decomposer micro-organisms, plant symbionts, soil and atmosphere in an intercropping system	15
Dynamics of a stochastic nutrient–plankton model with regime switching	14
Exploring trophic interactions and cascades in the Baltic Sea using a complex end-to-end ecosystem model with extensive food web integration	14
Movement, models, and metabolism: Individual-based energy budget models as next-generation extensions for predicting animal movement outcomes across scales	14
The impact of intensive management on net ecosystem productivity and net primary productivity of a Lei bamboo forest	14
Mitigation pathways towards climate change: Modelling the impact of climatological factors on wheat production in top six regions of China	14
Review of application of EPIC crop growth model	14
Sequential Monte-Carlo algorithms for Bayesian model calibration – A review and method comparison✰	13
The hitchhiker's guide to generic ecological-economic modelling of land-use-based biodiversity conservation policies	13
Numerical analysis of solid barrier heights and trees with porosity properties influence on the automobile's emission dispersion in the residential area	13
Improving the predictive performance of CLUE-S by extending demand to land transitions: The trans-CLUE-S model	13
A comparison of machine learning and statistical species distribution models: Quantifying overfitting supports model interpretation	13
Impacts of land-use intensity on ecosystems stability	13
Algal bloom prediction influenced by the Water Transfer Project in the Middle-lower Hanjiang River	13
Computational applications of extended SIR models: A review focused on airborne pandemics	13
Modeling structural mechanics of oyster reef self-organization including environmental constraints and community interactions	13
Socio-ecological systems modelling of coastal urban area under a changing climate – Case study for Ubatuba, Brazil	13
A simple modelling tool for assessing interaction with host and local infestation of sea lice from salmonid farms on wild salmonids based on processes operating at multiple scales in space and time	13
The impact analysis of media attention on local environmental governance based on four-party evolutionary game	13
Mathematical comparison and empirical review of the Monod and Droop forms for resource-based population dynamics	13
Modelling the impacts of changing land use and climate on sediment and nutrient retention in Lake Tana Basin, Upper Blue Nile River Basin, Ethiopia	12
Modeling terrestrial net ecosystem exchange using machine learning techniques based on flux tower measurements	12
Agent-based modelling of juvenile eel migration via selective tidal stream transport	12
Testing MaxEnt model performance in a novel geographic region using an intentionally introduced insect	12
Competitive superiority of N-fixing cyanobacteria when fixed N is scarce: Reconsiderations based on a model with heterocyst differentiation	12
Examining spatial carbon metabolism: Features, future simulation, and land-based mitigation	12
A new parametric measure of functional dissimilarity: Bridging the gap between the Bray-Curtis dissimilarity and the Euclidean distance	12
Assessing errors during simulation configuration in crop models – A global case study using APSIM-Potato	12
Estimating the Value of Global Ecosystem Structure and Productivity: A Geographic Information System and Emergy Based Approach	12
A three-dimensional Lagrangian particle tracking model for predicting transport of eggs of rheophilic-spawning carps in turbulent rivers	12
Changes in sessile oak (Quercus petraea) productivity under climate change by improved leaf phenology in the 3-PG model	12
Effects of non-representative sampling design on multi-scale habitat models: flammulated owls in the Rocky Mountains.	12
Modeling dissolved oxygen in a crab pond	12
Individual-based 3D modelling of root systems in heterogeneous plant canopies at the multiannual scale. Case study with a weed dynamics model	12
Global assessment of marine phytoplankton primary production: Integrating machine learning and environmental accounting models	12
Modeling watershed carbon dynamics as affected by land cover change and soil erosion	11
Improving species distribution models for dominant trees in climate data-poor forests using high-resolution remote sensing	11
Effect of study area extent on the potential distribution of Species: A case study with models for Raoiella indica Hirst (Acari: Tenuipalpidae)	11
High-resolution PVA along large environmental gradients to model the combined effects of climate change and land use timing: lessons from the large marsh grasshopper	11
Critical connectivity thresholds and the role of temperature in parasite metapopulations	11
Understanding resilience of farming systems: Insights from system dynamics modelling for an arable farming system in the Netherlands	11
Influences of traits and processes on productivity and functional composition in grasslands: A modeling study	11
Handling missing data in ecological studies: Ignoring gaps in the dataset can distort the inference	11
Analyzing socio-ecological interactions through qualitative modeling: Forest conservation and implications for sustainability in the peri‑urban bogota (Colombia)	11
A standard protocol for describing the evaluation of ecological models	11
Kinetics of phosphate uptake in the dinoflagellate Karenia mikimotoi in response to phosphate stress and temperature	11
Improving landscape ecological network connectivity in urbanizing areas from dual dimensions of structure and function	11
Performance comparison of sewage treatment plants before and after their upgradation using emergy evaluation combined with economic analysis: A case from Southwest China	11
Optimization of spatial layout based on ESV-FLUS model from the perspective of “Production-Living-Ecological”: A case study of Wuhan City	11
Sustainability assessment of agriculture production systems in Pakistan: A provincial-scale energy-based evaluation	11
Combined climate and regional mosquito habitat model based on machine learning	11
Application of Habitat Suitability Model Coupling with High - precision Hydrodynamic Processes	11
Ecohydraulic tools for aquatic fauna habitat and population status assessment, analysis and monitoring aimed at promoting integrated river management	11
General Landscape Connectivity Model (GLCM): a new way to map whole of landscape biodiversity functional connectivity for operational planning and reporting	11
Reflections of two systems ecologists on modelling coupled human and natural (socio-ecological, socio-environmental) systems	11
Reformulation of the Distributed Delay Model to describe insect pest populations using count variables	11
A hierarchical Bayesian approach for incorporating expert opinions into parametric survival models: A case study of female Ixodes ricinus ticks exposed to various temperature and relative humidity con	10
Water quality modeling of a eutrophic drinking water source: Impact of future climate on Cyanobacterial blooms	10
DynaGraM: A process-based model to simulate multi-species plant community dynamics in managed grasslands	10
Investigating the interactions between Chinese economic growth, energy consumption and its air environmental cost during 1989–2016 and forecasting their future trends	10
Spatial patterns of correlation between conspecific species and size diversity in forest ecosystems	10
Identification and analysis of areas prone to conflict with wild boar (Sus scrofa) in the vineyards of Malayer County, western Iran	10
Considering coasts: Adapting terrestrial models to characterize coastal wetland ecosystems	10
Mini-review of process-based food web models and their application in aquatic-terrestrial meta-ecosystems	10
Multidimensional ecosystem assessment of Poyang Lake under anthropogenic influences	10
Delimitation of urban growth boundaries by integratedly incorporating ecosystem conservation, cropland protection and urban compactness	10
TRIPLEX-Mortality model for simulating drought-induced tree mortality in boreal forests: Model development and evaluation	10
Sensitivity of aboveground biomass and species composition to climate change in boreal forests of Northeastern China	10
Predicting methane emissions from paddy rice soils under biochar and nitrogen addition using DNDC model	10
Integrated modelling of insect population dynamics at two temporal scales	10
Potential elevation shift of oriental beech (Fagus orientalis L.) in Hyrcanian mixed forest ecoregion under future global warming	10
Utilizing machine learning for detecting flowering in mid-range digital repeat photography	10
The impacts of vegetation on the soil surface freezing-thawing processes at permafrost southern edge simulated by an improved process-based ecosystem model	10
Optimization of deep learning model for coastal chlorophyll a dynamic forecast	10

AgentSeal: Agent-based model describing movement of marine central-place foragers	10
Projections of algae, eelgrass, and zooplankton ecological interactions in the inner Salish Sea – for future climate, and altered oceanic states	10
Quantifying tradeoffs between electricity generation and fish populations via population habitat duration curves	10
Evaluating five forest models using multi-decadal inventory data from mountain forests	10
Groundwater sustainability assessment under climate change scenarios using integrated modelling approach and multi-criteria decision method	9
Three-dimensional biogeochemical modeling of eutrophication in Edmonton stormwater ponds	9
Quantifying the GCM-related uncertainty for climate change impact assessment of rainfed rice production in Cambodia by a combined hydrologic - rice growth model	9
State- and context-dependent applications of an energetics model in free-ranging bighorn sheep	9
A less data demanding ecophysiological niche modeling approach for mammals with comparison to conventional correlative niche modeling	9
Contrasting occupancy models with presence-only models: Does accounting for detection lead to better predictions?	9
Cautions in weighting individual ecological niche models in ensemble forecasting	9
Biological control of the chaotic sugarcane borer-parasitoid agroecosystem	9
Pairwise learning for predicting pollination interactions based on traits and phylogeny	9
Modelling the impact of climate change and advanced agricultural technologies on grain output: Recent evidence from China	9
Key factors affecting discharge, soil erosion, nitrogen and phosphorus exports from agricultural polder	9
A process-based model to forecast risk of potato late blight in Norway (The Nærstad model): model development, sensitivity analysis and Bayesian calibration	9
Simulating the effects of aquatic avifauna on the Phosphorus dynamics of aquatic systems	9
Integration of local knowledge and data for spatially quantifying ecosystem services in the Hoeksche Waard, the Netherlands	9
A mathematical model for phosphorus interactions and transport at the sediment-water interface in a large shallow lake	9
Correcting for size bias in electrofishing removal samples	9
Factors controlling long-term carbon dioxide exchange between a Douglas-fir stand and the atmosphere identified using an artificial neural network approach	9
Spatial structure of natural boxwood and the invasive box tree moth can promote coexistence	9
Incorporating environmental variability in a spatially-explicit individual-based model of European sea bass✰	9
A Systematic National Stocktake of Crop Models in Morocco	9
Irregular harmful algal blooms triggered by feedback between toxin production and zooplankton feeding	9
Simulating the effects of thinning and species mixing on stands of oak (Quercus petraea (Matt.) Liebl./Quercus robur L.) and pine (Pinus sylvestris L.) across Europe	9
Evaluation of spatio-temporal variations in water availability using a process-based eco-hydrology model in arid and semi-arid regions of Mongolia	9
Modelling the impact of climate change and tillage practices on soil CO2 emissions from dry farmland in the Loess Plateau of China	9
Dryland vegetation pattern dynamics driven by inertial effects and secondary seed dispersal	9
Simulation of forest carbon fluxes by integrating remote sensing data into biome-BGC model	9
To be or not to be: the role of absences in niche modelling for highly mobile species in dynamic marine environments	9
Microbial modelling of Lake St. Clair: Impact of local tributaries on the shoreline water quality	8
Mathematical modelling of the interaction of winter wheat (Triticum aestivum) and Fusarium species (Fusarium spp.)	8
Simulating multi-scale movement decision-making and learning in a large carnivore using agent-based modelling	8
Predicting future patterns, processes, and their interactions: Benchmark calibration and validation procedures for forest landscape models	8
The importance of plant trait variability in grasslands: a modelling study	8
Evolution of the concept of ecological integrity and its study through networks	8
Initial water rights allocation of Industry in the Yellow River basin driven by high-quality development	8
Species distribution models applied to mosquitoes: Use, quality assessment, and recommendations for best practice	8
Development of a process-based eco-hydrology model for evaluating the spatio-temporal dynamics of macro- and micro-plastics for the whole of Japan	8
Growth acceleration is the key for identifying the most favorable food concentration of Artemia sp.	8
Emergy-based sustainability analysis of bioenergy production from marginal and degraded lands of India	8
Thermal diversity affects community responses to warming	8
Simulating canopy carbonyl sulfide uptake of two forest stands through an improved ecosystem model and parameter optimization using an ensemble Kalman filter	8
Using structural equation modeling to better understand microcystis biovolume dynamics in a mediterranean hypereutrophic reservoir	8
Assessing the impacts of agricultural conservation practices on freshwater biodiversity under changing climate	8
HyDiaD: A hybrid species distribution model combining dispersal, multi-habitat suitability, and population dynamics for diadromous species under climate change scenarios	8
Systematic bibliographic research on eutrophication-based ecological modelling of aquatic ecosystems through the lens of science mapping	8
Effect of tree demography and flexible root water uptake for modeling the carbon and water cycles of Amazonia	8
A minimalistic model of vegetation physiognomies in the savanna biome	8
Correcting for the effects of class imbalance improves the performance of machine-learning based species distribution models	8
Multi-model approach to integrate climate change impact on carbon sequestration potential of afforestation scenarios in Quebec, Canada	8
A tritrophic interaction model for an olive tree pest, the olive moth — Prays oleae (Bernard)	8
Incorporation of latitude-adjusted bioclimatic variables increases accuracy in species distribution models	8
A spatially explicit model of tree leaf litter accumulation in fire maintained longleaf pine forests of the southeastern US	8
Proof-of-concept model for exploring the impacts of microplastics accumulation in the Maryland coastal bays ecosystem	8
Understanding plankton ecosystem dynamics under realistic micro-scale variability requires modeling at least three trophic levels	8
A probabilistic framework for behavioral identification from animal-borne accelerometers	8
Modelling fine scale route choice of upstream migrating fish as they approach an instream structure	8
A coupled ecohydrodynamic model to predict algal blooms in Lake Titicaca	8
Predicting the potential impact of forest fires on runoff and sediment loads using a distributed hydrological modeling approach	8
Semi physical growth model of Lobesia botrana under laboratory conditions for Argentina’s Cuyo region	8
The impact of seasonal regulation of metabolism on the life history of Antarctic krill	8
Stressor gradient coverage affects interaction identification	8
Using the roughness height and manning number in hydrodynamic model to estimate the impact of intensive oyster aquaculture by floating & fixed rafts on water exchange with an application in Qinzho	8
Modelling the effects of urbanization on nutrients pollution for prospective management of a tropical watershed: A case study of Skudai River watershed	8
One size does not fit all: Priority areas for real world problems	8
Seed bank as a persistent problem in matrix population models: From uncertainty to certain bounds	8
Investigation of ecologically relevant wind patterns on Marion Island using Computational Fluid Dynamics and measured data	8
Sustainable strategies for harvesting predators and prey in a fluctuating environment	8
A dynamic biomass model of emergent aquatic vegetation under different water levels and salinity	7
Modelling the effects of ionising radiation on a vole population from the Chernobyl Red forest in an ecological context	7
A bioenergetics model for seasonal growth of Indian oil sardine (Sardinella longiceps) in the Indian west coast	7
Integrating monitoring and optimization modeling to inform flow decisions for Chinook salmon smolts	7
An eco-epidemiological model supporting rational disease management of Xylella fastidiosa. An application to the outbreak in Apulia (Italy)	7
A hybrid PCA-SEM-ANN model for the prediction of water use efficiency	7
Improved estimation of gross primary production of paddy rice cropland with changing model parameters over phenological transitions	7
Dynamic simulation and projection of land use change using system dynamics model in the Chinese Tianshan mountainous region, central Asia	7
A dynamic energy budget model for abalone, Haliotis discus hannai Ino	7
Optimising harvest strategies over multiple objectives and stakeholder preferences	7
Spread of Dutch elm disease in an urban forest	7
Adapting a dynamic vegetation model for regional biomass, plant biogeography, and fire modeling in the Greater Yellowstone Ecosystem: Evaluating LPJ-GUESS-LMfireCF	7
Ecological risk assessment of environmental stress and bioactive chemicals to riverine fish populations: An individual-based model of smallmouth bass Micropterus dolomieu✰	7
Comparative assessment of modeling deep learning networks for modeling ground-level ozone concentrations of pandemic lock-down period	7
Modeling the impact of urbanization and climate changes on terrestrial vegetation productivity in China by a neighborhood substitution analysis	7
Emergy theory to quantify the sustainability of large cascade hydropower projects in the upper Yangtze	7
Topology of additive pairwise effects in food webs	7
An early warning sign: trophic structure changes in the oceanic Gulf of Mexico from 2011—2018	7
Mapping recreation and tourism use across grizzly bear recovery areas using social network data and maximum entropy modelling	7
Model-based data analysis of the effect of winter mixing on primary production in a lake under reoligotrophication	7
Modeling the life cycle of four types of phytoplankton and their bloom mechanisms in a benthic-pelagic coupled ecosystem	7
Assessing the future of an intertidal seagrass meadow in response to sea level rise with a hybrid ecogeomorphic model of elevation change	7
Succession mechanism of microbial community with high species diversity in nutrient-deficient environments with low-dose ionizing radiation	7
Integrating ecosystem services modeling and efficiencies in decision-support models conceptualization for watershed management	7
Importance of timing: Vulnerability of semi-arid rangeland systems to increased variability in temporal distribution of rainfall events as predicted by future climate change	7