OOIR: Observatory of International Research

Papers

(The TQCC of Biophysical Chemistry is 6. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-08-01 to 2026-08-01.)

Article	Citations
Editorial Board	38
The Boltzmann principle in the theory of enzymatic catalysis and conformational mobility of biomolecules	33
Coupling of conformation and CPD damage in nucleosomal DNA	31
Molecular insights into the transport and toxicity of 6-PPD: Interactions with human serum albumin and alpha-glucosidase	27
Intrinsic disorder and structural biology: Searching where the light isn't	27
Editorial Board	24
Free energy landscape of wrapping of lipid nanocluster by polysaccharides	23
The role of hydrophobic patches of de novo designed MSI-78 and VG16KRKP antimicrobial peptides on fragmenting model bilayer membranes	21
Effect of cycloastragenol and punicalagin on Prp(106–126) and Aβ(25–35) oligomerization and fibrillizaton	20
Molecular docking and density functional theory studies of flavonoids of Holy basil plant against COX-2 enzyme	20
A detailed review of genetically encodable RFPs and far-RFPs and their applications in advanced super-resolution imaging techniques	19
In silico investigation on the mutational analysis of BRCA1-BARD1 RING domains and its effect on nucleosome recognition and ubiquitination	19
The contrasting roles of co-solvents in protein formulations and food products	18
Probing pharmaceutically important amino acids L-isoleucine and L-tyrosine Solubilities: Unraveling the solvation thermodynamics in diverse mixed solvent systems	18
Studies on stabilization of collagen using Cr-doped polydopamine complex	17
Unveiling the mechanisms underlying photothermal efficiency of gold shell-isolated nanoparticles (AuSHINs) on ductal mammary carcinoma cells (BT-474)	17
The effect of various compounds on the COVID mechanisms, from chemical to molecular aspects	16
Interaction of gentamicin and gentamicin-AOT with poly-(lactide-co-glycolate) in a drug delivery system - density functional theory calculations and molecular dynamics simulation	16
How to evict HP1 from H3: Using a complex salt bridge	15
Investigation of serotonin-receptor interactions, stability and signal transduction pathways via molecular dynamics simulations	15
Selective IR super-resolution imaging of β-keratins at the bulk or interface in feather detected by using a nonlinear optical process	15
Longitudinal cerebrospinal fluid metabolomics changes during treatment of tuberculous meningitis: A prospective cohort study	15
Editorial Board	15
Infrared spectrochemical findings on intermittent fasting-associated gross molecular modifications in rat myocardium	14
The influence of N-alkyl chains in benzoyl-thiourea derivatives on urease inhibition: Soil studies and biophysical and theoretical investigations on the mechanism of interaction	14

Corrigendum to “Effect of disialoganglioside GD3 on the subgel, gel and fluid phases of cationic DODAB vesicles” [biophysical chemistry 326 (2025) 107503]	13
Computational pharmacology: New avenues for COVID-19 therapeutics search and better preparedness for future pandemic crises	13
The amyloidogenic peptide stretch in human tau, tau306–311 is a promising injectable hydrogelator	13
Editorial Board	13
Study of neurotransmitter dopamine interaction with DNA by electrochemical and spectroscopic methods	13
Spectroscopic, quantum chemical, and antibacterial studies on novel push–pull chromophore 3-(4-nitrophenyl)-3H-quinazolin-4-one	12
Transient protonic capacitor: Explaining the bacteriorhodopsin membrane experiment of Heberle et al. 1994	12
Protein folding in vitro and in the cell: From a solitary journey to a team effort	12
Elucidation of benzene sulfonamide derivative binding at a novel interprotomer pocket of wild type and mutants of coxsackievirus B3 viral capsid using molecular dynamics simulations and density functi	12
Sustainable production of Terminalia arjuna enabled ZnO/MnO nanocomposites via microwave irradiation with improved photocatalytic and antioxidant performance	12
Atomic insights into the inhibition of R3 domain of tau protein by epigallocatechin gallate, quercetin and gallic acid	12
Editorial Board	12
Different behavior of Ferguson plot between agarose and polyacrylamide gels	11
Biochemical and biophysical properties of a recombinant serine peptidase from Purpureocillium lilacinum	11
Hydrogen‑deuterium exchange mass spectrometry to study interactions and conformational changes of proteins in paints	11
Decoding SARS-CoV-2 variants: Mutations, viral stability, and breakthroughs in vaccines and therapies	11
Editorial Board	11
Aβ42 fibril and non-fibril oligomers characterization using a nanopipette	11
C-terminal determinants for RNA binding motif 7 protein stability and RNA recognition	11
Elucidating the conformational behavior and membrane-destabilizing capability of the antimicrobial peptide ecPis-4s	11
Editorial Board	11
Exploring the aggregation of amyloid-β 42 through Monte Carlo simulations	11
Isolated auto-citrullinated regions of PADI4 associate to the intact protein without altering their disordered conformation	11
Next-generation antibacterial cryogels: Berberine-infused smart membranes with molecular docking-guided targeting of MRSA and MDR E. coli	11
Fifty-hertz magnetic fields induce DNA damage through activating mPTP associated mitochondrial permeability transition in senescent human fetal lung fibroblasts	10
NMR and EPR study of the interaction of tris(3-hydroxy-4-pyridinonato) Ga(III) complexes with liposomes that mimic plant membranes	10
Hydration parameters (h values) of hydrophobic l-amino acids estimated using the viscosity B-coefficients and partial molar volumes, and the low sensitivity of macromolecular interactions of xanthan g	10
DODAB vesicles containing lysophosphatidylcholines: The relevance of acyl chain saturation on the membrane structure and thermal properties	10
Exploring the physicochemical properties of the integration of Tristearoyl uridine in Langmuir monolayers: An approach to cell membrane modeling for prodrugs	10
Sugar distributions on gangliosides guide the formation and stability of amyloid-β oligomers	10
Binding properties of recombinant LDL receptor and LOX-1 receptor to LDL measured using bio-layer interferometry and atomic force microscopy	10
A pipeline to evaluate the discrepant interactions between typical nitrogenous disinfection byproduct haloacetonitriles and human hemoglobin	9
Interaction of Myrsinoic acid a with biomembrane models: Differential effects on DPPC and DPPS properties revealed by surface rheology and vibrational spectroscopy	9
The effect of lipid saturation on the formation of styrene maleic acid lipid nanoparticles	9
Structural and mechanical behavior of type-I collagen fibrils in presence of induced electrostatic interactions through ionic liquids	9
Organic solvents aggregating and shaping structural folding of protein, a case study of the protease enzyme	9
Interaction of detergent with complex mimics of bacterial membranes	9
The B-box1 domain of PML mediates SUMO E2-E3 complex formation through an atypical interaction with UBC9	9
Editorial Board	9
Crystal structure analysis of pyrrolidone carboxyl peptidase from Thermus thermophilus	9
Self-assembling of coiled-coil peptides into virus-like particles: Basic principles, properties, design, and applications with special focus on vaccine design and delivery	9
Simulated pressure changes in LacI suggest a link between hydration and functional conformational changes	9
A combination of structure-based virtual screening and experimental strategies to identify the potency of caffeic acid ester derivatives as SARS-CoV-2 3CLpro inhibitor from an in-house database	9
The scientific adventures of Richard Epand	9
Protonic conductor: Explaining the transient “excess protons” experiment of Pohl's group 2012	9
The membrane-binding bacterial toxin long direct repeat D inhibits protein translation	9
Local optical probing of proteins of various sizes and charges with FITC label	9
Exploring the binding kinetics and behaviors of self-aggregated beta-amyloid oligomers to phase-separated lipid rafts with or without ganglioside-clusters	9
Analyzing the interaction of Helicobacter pylori GAPDH with host molecules and hemin: Inhibition of hemin binding	9
Editorial Board	8

Thermodynamics of oligomerization and Helix-to-sheet structural transition of amyloid β-protein on anionic phospholipid vesicles	8
Luteoloside inhibits Aβ1–42 fibrillogenesis, disintegrates preformed fibrils, and alleviates amyloid-induced cytotoxicity	8
Tunnel connects lipid bilayer to occluded odorant-binding site of insect olfactory receptor	8
Structural dynamics of a designed peptide pore under an external electric field	8
Oxidative damage to βL-crystallin in vitro by iron compounds formed in physiological buffers	8
Editorial Board	8
The role of nonlinear axonal membrane capacitance in modulating ion channel cooperativity in action potential dynamics: Studies on Hodgkin-Huxley's model	8
Differential effects of DTT on HEWL amyloid fibrillation and fibril morphology at different pH	8
Effects of curcumin in the interaction with cardiolipin-containg lipid monolayers and bilayers	8
Molecular dynamics of SARS-CoV-2 omicron variants from Philippine isolates against hesperidin as spike protein inhibitor	8
Editorial Board	8
Modulation of the phospholipid dynamics and bilayer water accessibility with the membrane-associated nucleation of β-amyloid (Aβ) peptides	8
Biotransformation of phenytoin in the electrochemically-driven CYP2C19 system	8
The composition of fusogenic lipid mixtures at the air-water modulates the physicochemical properties changes upon interaction with lysicamine	8
ROC-guided virtual screening, molecular dynamics simulation, and bioactivity validation assessment Z195914464 as a 3CL Mpro inhibitor	8
Isolation of Amyloid-like Protein Aggregates (APA) from white bread and their characterisation	8
Editorial Board	8
Biophysical significance of fluorescence spectroscopy in deciphering nucleic acid dynamics: From fundamental to recent advancements	8
A semiempirical and machine learning approach for fragment-based structural analysis of non-hydroxamate HDAC3 inhibitors	7
Effect of partial O-methylation in dehydrodieugenol on its antitrypanosomal activity - correlation with the toxicity using cell membrane models	7
Targeting hydrophobicity in biofilm-associated protein (Bap) as a novel antibiofilm strategy against Staphylococcus aureus biofilm	7
Identification of the therapeutic potential of novel TIGIT/PVR interaction blockers based advanced computational techniques and experimental validation	7
Synergistic effects of glycerol on the hydration dynamics and rheological properties of collagen	7
Salvianolic acid B prevents the amyloid transformation of A53T mutant of α-synuclein	7
RufO, a cytochrome P450 (CYP) enzyme, recognition to putative substrates and a redox partner: Binding and structural insights	7
Metal-binding and folding thermodynamics of Escherichia coli ribonuclease HI related to its catalytic function	7
Richer than previously probed: An application of 1H NMR reveals one hundred metabolites using only fifty microliter serum	7
Backbone equilibrium in mismatched DNA influenced by solution conditions	7
Analyzing of L-tryptophan thermodynamics and its solubility in aqueous acetonitrile blends at diverse temperatures	7
Combined effect of the head groups and alkyl chains of archaea lipids when interacting with bacteriorhodopsin	7
Evidence of the different effect of mercury and cadmium on the hIAPP aggregation process	7
Identification of determinants of lipid and ion transport in TMEM16/anoctamin proteins through a Bayesian statistical analysis	7
Mutations in asparaginase II from E. coli and implications for inactivation and PEGylation	7
The effect of human serum albumin glycation on the binding of antidiabetic agent-exenatide; the multispectroscopic studies. Part II	7
Exploring the solubility and intermolecular interactions of biologically significant amino acids l-serine and L-cysteine in binary mixtures of H2O + DMF, H2O + DMSO and H2O + ACN in temperature range	7
Equilibrium solubility, solvent effect, solvation and thermodynamic modeling of 1, 3-dinitropyrazole in solutions of methyl alcohol /ethyl alcohol + water	7
Asymmetrical interactions between nanoparticles and proteins arising from deformation upon adsorption to surfaces	6
Structural packing of the non-amyloid component core domain in α-synuclein plays a role in the stability of the fibrils	6
Structural modeling, energetic analysis and molecular design of a π-stacking system at the complex interface of pediatric respiratory syncytial virus nucleocapsid with the C-terminal peptide of phosph	6
Decoding the new dimensions of leucodelphinidin as a dual antioxidant and anti-diabetic candidate: A DFT, docking and dynamics evaluation	6
Site-resolved 13C/15N solid-state nuclear magnetic resonance analysis of schizorhodopsin 1 in lipid bilayers	6
In silico analysis of aptamer-RNA conjugate interactions with human transferrin receptor	6
Force-induced unzipping of DNA in the presence of solvent molecules	6
pH-equilibration of human hair: Kinetics and pH-dependence of the partition ratios for H − and OH -ions based on a Freundlich isotherm	6
Editorial Board	6
Cationic liposomes as carriers of natural compounds from plant extract	6
Probing and gauging of D-Penicillamine xenobiotics in hepatic Wilson disease patients	6
Effects of an external static EF on the conformational transition of 5-HT1A receptor: A molecular dynamics simulation study	6
Mechanistic and biophysical insight into the inhibitory and disaggregase role of antibiotic moxifloxacin on human lysozyme amyloid formation	6
Aggregation and partitioning of amyloid peptide fragments in the presence of a lipid bilayer: A coarse grained molecular dynamics study	6
Interaction mechanism of a cysteine protease inhibitor, odanacatib, with human serum albumin: In vitro and bioinformatics studies	6
Editorial Board	6
A hybrid deep learning framework for accurate N6,2′-O-Dimethyladenosine site prediction	6
The influence of pH on the structure and stability of the Grb2 dimer reveals changes in the inter-domain and molecular interaction: Could it be a modulation mechanism?	6
Unveiling theranostic potential: Insights into cell-free microRNA-protein interactions	6
Structural and functional insights into Vitamin D receptor mutations: An in-silico investigation of polymorphism-induced resistance	6
Editorial Board	6
A benchmark for evaluation of structure-based online tools for antibody-antigen binding affinity	6
Osmotic stress studies of G-protein-coupled receptor rhodopsin activation	6
Copper(II) enhances the antibacterial activity of nitroxoline against MRSA by promoting aerobic glycolysis	6