Journal of Computational Chemistry

Papers
(The TQCC of Journal of Computational Chemistry is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-05-01 to 2026-05-01.)
ArticleCitations
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Potential energy surfaces and dynamic properties via ab initio composite and density functional approaches80
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Groupy: An Open‐Source Toolkit for Molecular Simulation and Property Calculation69
Revisiting the “Cluster‐In‐Solvent” Approach for Computational Spectroscopy: The Vibrational Circular Dichroism as a Test Case61
K 4 Carbon Modifications by Modulating Phonon Eigenvectors57
FFLUX molecular simulations driven by atomic Gaussian process regression models56
A density fitting scheme for the fast evaluation of molecular electrostatic potential55
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Improving the reliability of machine learned potentials for modeling inhomogeneous liquids35
Simulation studies of polypeptoids using replica exchange with dynamical scaling and dihedral biasing33
Energy and Real Space Characteristics of Non‐Covalent Interactions Across the Periodic Table33
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Expanding horizons in conceptual density functional theory: Novel ensembles and descriptors to decipher reactivity patterns31
Quantification of Lewis Acidity and Lewis Basicity: A Density‐Based Reactivity Theory Study31
REGCCSD (T): A New Efficient CCSD (T) Approach Accelerated by th30
Ab initiostudies of counterion effects in molecular quantum‐dot cellular automata30
Microcanonical Rate Constants With Rice–Ramsperger–Kassel–Marcus in Eyringpy28
Alanine boronic acid functionalized UiO‐66 MOF as a nanoreactor for the conversion of CO2 into formic acid27
Molecular dynamics of liquid–electrode interface by integrating Coulomb interaction into universal neural network potential26
Accurate and Cost‐Efficient DLPNOCCSD(T)‐Based Feller‐Peterson‐Dixon Protocols Calibrated on Association Reactions of Li+ Ion With Mixed Organic Carbonates26
Chemical bonding in Uranium‐based materials: A local vibrational mode case study of Cs 2UO 2Cl 4 and UCl 4 crystals24
Hydrostatic Pressure Effects on the Mechanical, Thermodynamic, Structural, Electronic, and Optical Attributes of AcGaO3: Implications for Renewable Energy Systems23
A Thorough Systematic Conformational Study of an Experimentally Known Lantern‐Like Superphane23
Ranking the Properties Important for Understanding Noncovalent Bond Strength23
Reactive orbital energy theory serving a theoretical foundation for the electronic theory of organic chemistry23
Producing chemically accurate atomic Gaussian process regression models by active learning for molecular simulation22
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Predicting Ti‐49 NMR Chemical Shift With New NMRDKH 22
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A Monte Carlo approach to study the effect of ions on the nucleation of sulfuric acid–water clusters20
Interaction energy of Cl2 and Br2 with H2O: Exchange, dispersion and density the crucial ingredients20
Correlation consistent auxiliary basis sets in density fitting HartreeFock : The atoms sodium t20
Excited state relaxation mechanisms of paracetamol and acetanilide20
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Non‐Covalent Molecular Interaction Rules to Define Internal Dimer Coordinates for Quantum Mechanical Potential Energy Scans19
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A machine learning potential construction based on radial distribution function sampling19
Neural graph distance embedding for molecular geometry generation19
Peri‐Fused Six‐Membered Cyclic Nitrenium Ions ( PCNIs ): Electronic Structure and Aromaticity18
Scoring molecular wires subject to an ultrafast laser pulse for molecular electronic devices18
PyRETIS 3: Conquering rare and slow events without boundaries18
Leveraging Molecular Mechanics With the uESE Continuum Solvation Model for Efficient Solvation Free Energy Prediction: Impact of Conformation and Extensive Validation18
Machine learning‐assisted search for novel coagulants: When machine learning can be efficient even if data availability is low18
TD‐DFT study of BIPS spiropyran: Effects of functionals and high‐polarity solvent on CspiroO bond dissociation and recovery18
Computational mechanistic studies on persulfate assisted p‐phenylenediamine polymerization18
Structures and Solvation Energies Effects Versus Temperature. An MP2 Investigations in the Framework of Cluster Model17
A configuration‐based heatbath‐CI for spin‐adapted multireference electronic structure calculations with large active spaces17
Electron Upconversion Enables CP and CS Bond Formation Under Mild Oxidative Conditions: A Theoretical Study17
Counting Active Sites for Nanocatalysis17
Leveraging the Bias‐Variance Tradeoff in Quantum Chemistry for Accurate Negative Singlet‐Triplet Gap Predictions: A Case for Double‐Hybrid DFT17
Py3BR: A software for computing atomic three‐body recombination rates17
Thermal Decomposition Simulations of Hydroxylamine Pentazolate With Deep Neural Network Potential17
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Effects of Probe‐Related Correlations on Local Electrostatic Potentials Around DNA16
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The Influence of the Solvation on the Bonding of Molecular Complexes of Diatomic Halogens With Nitrogen‐Containing Donors and Their Stability With Respect to the Heterolytic Halogen‐Halogen Bond Split15
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Predicting Molecular Energies of Small Organic Molecules With Multi‐Fidelity Methods15
Theoretical study of structure sensitivity on ceria‐supported single platinum atoms and its influence on carbon monoxide adsorption15
Ab initio molecular dynamics study of intersystem crossing dynamics for MH2 (M = Si, Ge, Sn, Pb) on spin‐pure and spin‐mixed potential energy surfaces15
Voronota‐LT: Efficient, Flexible, and Solvent‐Aware Tessellation‐Based Analysis of Atomic Interactions14
Elongation Method‐Based Alternating Multi‐Directional Automated Property Optimization Process and Its Application14
Correction to “Exploring Lead‐Free Ca 3 BiCl 3 14
An interoperable implementation of collective‐variable based enhanced sampling methods in extended phase space within the OpenMM package14
The Effects of Conformational Sampling and QM Region Size in QM/MM Simulations: An Adaptive QM/MM Study With Model Systems14
Self‐consistent field method for open‐shell systems within the density‐matrix functional theory13
On the Meaning of De‐Excitations in Time‐Dependent Density Functional Theory Computations13
A multi‐descriptor analysis of substituent effects on the structure and aromaticity of benzene derivatives: π‐Conjugation versus charge effects13
SeqDPI: A 1DCNN approach for predicting binding affinity of kinase inhibitors13
Redox‐active ligands as a challenge for electronic structure methods13
AIMD‐Based Protocols for Modeling Exciplex Fluorescence Spectra and Inter‐System Crossing in Photocatalytic Chromophores13
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Assessment of density functional approximations for N2 and CO2 physisorption on benzene and graphene12
Theoretical investigation of structure and electronic properties in Cisplatin‐citrate complexes12
On the reliability of atoms in molecules, noncovalent index, and natural bond orbital to identify and quantify noncovalent bonds12
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Study of absorption and emission spectra of substituted terthiophene compounds by methods of theoretical chemistry12
Ingenuity in performing replica permutation: How to order the state labels for improving sampling efficiency12
Unraveling Reaction Path Bifurcation: Insights Into Electron Movement via Natural Reaction Orbitals12
Harmonic and anharmonic vibrational computations for biomolecular building blocks: Benchmarking DFT and basis sets by theoretical and experimental IR spectrum of glycine conformers12
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Foreword to the special issue on machine learning/artificial intelligence12
Chemical bonding of HF, HCl, and H2O onto YF3 surfaces: Quantification by first principles12
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Stability and Reactivity of TiO2n$$ {\left({\mathrm{TiO}}_2\right)}_n $$, n = 1–10, Clusters and Their Interactions With CO2$$ {\mathrm{CO}}_2 $$11
Quality over quantity: Sampling high probability rare events with the weighted ensemble algorithm11
Theoretical design of new ligands to boost reaction rate and selectivity in palladium‐catalyzed aromatic fluorination11
Atomic Simulations of Hetero Coalescence of Cu 147 and Ag 147 Clusters11
Reduction‐Induced Structural and Motional Changes of Plant‐Type Ferredoxin Using Molecular Dynamics and Umbrella Sampling Simulations11
Theoretical study on the mechanism of alcohol photooxidation on Nb2O5 surface11
Unveiling the Hypervalent Electronic Structure of Main Group Zwitterions: Ylides or Ylenes? A DFT Study11
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Computational assessment of the use of graphene‐based nanosheets as PtII chemotherapeutics delivery systems11
On delivering polar solvation free energy of proteins from energy minimized structures using a regularized super‐Gaussian Poisson–Boltzmann model11
Achieving Pressure Consistency in Mechanochemical Simulations of Chemical Reactions Under Pressure10
BinderSpace : A package for sequence space analyses for datasets of affinity‐selected 10
Multiscale modeling of stochastic dynamics processes with MBN Explorer10
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Computational Study of Complexation in LiH:nNH3 (n = 1–4) Clusters: An Interplay Among Hydrogen, Dihydrogen, and Lithium Bonds10
On the Role of Electronic Correlation and State‐Specific Environment Polarization in Singlet–Triplet Gap Inversion10
MSCMLCIDTI: Drug–Target Interaction Prediction Based on Multiscale Feature Extraction and Deep Interactive Attention Fusion Mechanisms10
Interrelationships Between Structural, Mechanical, and Electronic Properties in g‐ C 3 N 10
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TS‐tools: Rapid and automated localization of transition states based on a textual reaction SMILES input10
Binding propensity and selectivity of cationic, anionic, and neutral guests with model hydrophobic hosts: A first principles study10
Molecular and Electronic Structure and Properties of the Single Benzene‐Based Fluorophores Containing Guanidine Subunit10
DFT Insights Into the Structural, Stability, Elastic, and Optoelectronic Characteristics of Na 10
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MzDOCK: A free ready‐to‐use GUI‐based pipeline for molecular docking simulations9
Chemical Bond Overlap Descriptors From Multiconfiguration Wavefunctions9
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Aromatic and magnetic properties in a series of heavy rare earth‐doped Ge6 cluster anions9
pyHRMC : Hybrid Reverse Monte Carlo for Electron Total Scattering9
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Theoretical investigations of the substituent effect on the opto‐electronic properties of the linearly fused napthadithiophene‐based molecules9
Large scale peptide screening against main protease of SARS CoV‐29
Mechanism of the Non‐Kasha Fluorescence in Pyrene9
First Principles Rovibronic Absorption Spectra of HF Molecule9
Active‐learning for global optimization of Ni‐Ceria nanoparticles: The case of Ce4−xNixO8−x (x = 1, 2, 3)9
Photophysics of tzAdenine and tzGuanine fluorescent nucleobases embedded into DNA and RNA9
A new chapter in the never ending story of cycloadditions: The puzzling case of SO2 and acetylene9
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Comprehensive investigation of electronic structure, phonon spectrum and thermoelectric performance of LuMSb (M = Ni, Pd, Pt) half Heusler compounds from first princip9
Modeling pyranose ring pucker in carbohydrates using machine learning and semi‐empirical quantum chemical methods9
Modeling spin relaxation in complex radical systems using MolSpin9
Understanding chemistry with thesymmetry‐decomposed Voronoideformation density charge analysis9
The 2,4,6,8‐Tetramethylhomotropyliumdication9
All‐atom simulations of the trimeric spike protein of SARS‐CoV‐2 in aqueous medium: Nature of interactions, conformational stability and free energy diagrams for conformational t9
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On the computation of frequency‐dependent molecular magnetizabilities via dynamical charge and current electron densities9
Qcforever2: Advanced Automation of Quantum Chemistry Computations9
Growth pattern and electronic and magnetic properties of Cr‐doped silver clusters9
Automatic generation of complementary auxiliary basis sets for explicitly correlated methods8
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Cycloaddition reactions via “on water” protocol reactions: A density functional theory study8
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The SHARK integral generation and digestion system8
On the aromaticity and stability of benzynes in the ground and lowest‐lying triplet excited states8
Uncovering the hidden reactivity of benzyne/aryne precursors utilized under milder condition: Bonding and stability studies by EDA‐NOCV analyses8
Accuracy of Reaction Coordinate Based Rate Theories for Modelling Chemical Reactions: Insights From the Thermal Isomerization in Retinal8
Ligand‐stabilized heteronuclear diatomics of group 13 and 158
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A DFT and kinetic study: Is it possible to prepare epoxides without catalysts using the in‐situ generated peroxy radicals or peroxides by one‐step method?8
Study of mechanical, optical, and thermoelectric characteristics ofBa2XMoO6(X = Zn, Cd) double perovskite for energy harvesting8
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Studying the Protein Thermostabilities and Folding Rates by the Interaction Energy Network in Solvent8
Thermal isomerization rates in retinal analogues using Ab‐Initio molecular dynamics8
Implementation of probe rheology simulation technique in atomistically detailed molecular dynamics simulations8
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Benchmarking biomolecular force field‐based Zn 2+ for mono‐ and bimetallic ligand binding sites8
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A neural network potential based on pairwise resolved atomic forces and energies7
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An Investigation of the Structural, Electronic, and Magnetic Properties of VMnGe n 7
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Development of a multi‐step screening procedure for redox active molecules in organic radical polymer anodes and as redox flow anolytes7
A formula and numerical study on Ewald 1D summation7
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Ab initio electronic absorption spectra of para ‐nitroaniline in different solvents: Intramolecula7
A coarse‐grained approach toNMR‐data‐assisted modeling of protein structures7
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Sparse group selection and analysis offunction‐relatedresidue forprotein‐staterecognition7
FastMDAnalysis: Software for Automated Analysis of Molecular Dynamics Trajectories7
Hybrid Unsupervised/Supervised Machine Learning for Identifying Molecular Structural Fingerprints From Ensemble Property7
Accurate thermochemistry at affordable cost by means of an improved version of the JunChS‐F12 model chemistry7
Computational NMR spectroscopy of 205Tl7
Learning organo‐transition metal catalyzed reactions by graph neural networks7
DOCK 6: Incorporating hierarchical traversal through precomputed ligand conformations to enable large‐scale docking7
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An atoms‐in‐molecules characterization of the nature of the OO bond in peroxides and nitroxide dimers7
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Mechanistic Study of the Carbonylation of Aziridines to β‐Lactams: Alkylation, Solvent and Molecular NaBr and MgO Clusters Catalysts Effects7
Molecular adsorption on coinage metal subnanoclusters: ADFT+D3investigation7
Exploring the Chemical Space of Noncovalent Molecular Clusters Using Automated Cluster Building Algorithm and Neural Network Potential7
Ionic liquids intercalation in titanium carbide MXenes: A first‐principles investigation7
Theoretical Study of the Subsequent Decomposition Mechanisms of 1,1‐Diamino‐2,2‐dinitroethene (FOX‐7)7
Bonding Evolution Theory Study of the [3+2] Cycloaddition Reaction Between Benzonitrile Oxide and Ethylenic Derivatives7
Realization of the structural fluctuation of biomolecules in solution: Generalized Langevin mode analysis7
Ladderenes as Covalently Condensed Acetylene: A DFT Investigation of Gold(I)‐Catalyzed Mechanism, Substituent Effects and Energy Storage Potential7
Development and Validation of Atomic Group Descriptors for Substituent Effects7
An Approximate Method for Exploring Nonradiative Decay Pathways From Highly Excited States of Lanthanide Complexes: Application to Luminescent Cerium Complexes7
Molecular Insights Into the Ionic Assembly of Poly‐Galacturonic Acid Oligomers—Impact of Charge, Ionic Radius, and Polymer Functionalization7
A Hammett's analysis of the substituent effect in functionalized diketopyrrolopyrrole ( DPP ) systems: Optoelectronic properties and intramolecular c7
Nonlinear optical properties DFT calculations of polyacethylene and copolymers models substituted with aldimines chromophores as side chains7
Fragment and torsion biasing algorithms for construction of small organic molecules in proteins using DOCK7
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Correction to “Three‐Dimensional Metallic Boron Carbide: Stability and Properties”7
Electronic and magnetic properties of TATA‐DNA sequence driven by chemical functionalization7
pyHRSOA and pyTHSOA: Postprocessing Codes for the Computation of Second and Third‐Order Scattering Optical Activities7
Theoretical exploration of the reactivity of cellulose models under non‐thermal plasma conditions—mechanistic and NBO studies7
Exploring Lead‐Free Ca3BiCl3‐Based Perovskite Solar Cells: A Computational Comparison of Charge Transport Layers With DFT and SCAPS1D7
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Concerted versus stepwise proton transfer reactions in the [2, 2′‐bipyridyl]‐3‐3′‐diol molecule: A static and dynamic ab‐initio investigation7
Delocalization‐ratio analysis of 3‐center bonding in position‐space for closo‐boranes and related systems: Approaching the styx picture and beyond7
Binding of human ACE2 and RBD of Omicron enhanced by unique interaction patterns among SARS‐CoV ‐2 variants of concern7
Metadynamics simulations with Bohmian‐style bias potential7
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Tuning Hydrogen Bond Strength in GC ( WC ), GC 6
Lantern‐type dinickel complexes: An exploration of possibilities for nickel–nickel bonding with bridging bidentate ligands6
Foreword to the special issue for Elfi Kraka6
Mechanistic insights into the role of cyclodextrin in the regioselective radical CH trifluoromethylation of aromatic compounds6
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Tackling Orientational Isomerism in Metal–Organic Frameworks Comprising Low‐Symmetry Linker Molecules via Simulated Annealing Featuring a Neural Network Potential6
Computational Characterization of the Energetics, Structure, and Spectroscopy of Biofuel Precursors: The Case of Furfural‐Acetone‐Furfural6
Reactivities of silane coupling agents in the silica/rubber composites: Theoretical insights into the relationships between energy barriers and electronic characteristics6
Can Water Trigger Room‐Temperature Formation of Benzofuran‐2(3H)‐one Scaffolds From Vinyldiazene Derivatives? Computational Insights Into an Unusual Cyclization6
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An efficient method by combining different basis sets and SAPT levels6
The unusual stability of H‐bonded complexes in solvent caused by greater solvation energy of complex compared to those of isolated fragments6
Fast vibrational analysis of molecular systems6
Permutationally invariant polynomial representation of polarizability tensor surfaces for linear regression analysis6
An improved DIIS method using a versatile residual matrix to accelerate SCF starting from a crude guess6
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Modulating Carbon Dioxide Hydrate With Ammonium and Phosphonium‐Based Deep Eutectic Solvent: A Molecular Dynamics Study of Cage‐Specific Dissociation Mechanism6
Efficient Machine Learning Prediction of Solvent‐Dependent 1H NMR Chemical Shifts in Zinc Complexes6
A Computational Modeling of ADLumin Chemiluminescence: Oxygenation and Dioxetanone Formation6
On the Bona Fide Sampling of Reaction Candidates in Red Moon Method by Replica‐Exchange Molecular Dynamics Method: REMD 6
Beryllium bonding with noble gas atoms6
A Theoretical Study on Crossings Among Electronically Excited States and Laser Cooling of Group VIA (S, Se, and Te) Hydrides6
Enhancement of energy decomposition analysis in fragment molecular orbital calculations6
Simplistic Software for Analyzing Mass Spectra and a Mixed Experimental‐Theoretical Database for Identifying Poisonous and Explosive Substances6
Ab initio calculations of the interaction potentials and thermodynamic functions for ArN and ArN+6
Modulation of the Product Upon the Reaction of CO2 With Dimethylamine Cluster: A Topological Analysis of the Reaction Mechanism6
Foreword to the Special Issue for Hans Lischka6
Spectroscopic Investigation of Thioacrolein by Variational and Perturbational Approaches6
Restriction on molecular fluxionality by substitution: A case study for the 1,10‐dicyanobullvalene6
Metal Dimers‐Doped h‐BN Structures as Novel Toxic Gases Sensors With Enhanced Sensitivity Properties: An ADFT Study6
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