Applied Microbiology and Biotechnology

Papers
(The TQCC of Applied Microbiology and Biotechnology is 12. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-11-01 to 2025-11-01.)
ArticleCitations
Characterization of a novel broad-spectrum endolysin PlyD4 encoded by a highly conserved prophage found in Aeromonas hydrophila ST251 strains279
Correction to: Impacts of elicitors on metabolite production and on antioxidant potential and tyrosinase inhibition in watercress microshoot cultures186
Assessing the functional diversity of rhizobacteria from cacao by partitioning root and shoot biomasses165
Some novel features of strong promoters discovered in Cytophaga hutchinsonii155
Sequential uptake of aldoses over fructose and enhanced phosphate solubilization in Rhizobium sp. RM136
Biovalorisation of agro-industrial wastes into astaxanthin by Xanthophyllomyces dendrorhous118
Conversion of viridicatic acid to crustosic acid by cytochrome P450 enzyme-catalysed hydroxylation and spontaneous cyclisation107
Optimization and cholesterol-lowering activity of exopolysaccharide from Lactiplantibacillus paraplantarum NCCP 96297
Synergistic corrosion effects of magnetite and microorganisms: microbial community dependency81
Ultra-high irradiance (UHI) blue light: highlighting the potential of a novel LED-based device for short antifungal treatments of food contact surfaces77
Effects of mokF gene deletion and overexpression on the Monacolin K metabolism yields of Monascus purpureus76
Synergism between metallic nanoparticles and antibiotics75
Development of efficient 5-ketogluconate production system by Gluconobacter japonicus72
Biodegradation of polyurethane by the microbial consortia enriched from landfill70
Effects of reducing, stabilizing, and antibiotic agents on “Candidatus Kuenenia stuttgartiensis”69
Biotechnological and endophytic-mediated production of centellosides in Centella asiatica66
Chimeric lipoproteins for leptospirosis vaccine: immunogenicity and protective potential66
Rare earth contamination of edible vegetation: Ce, La, and summed REE in fungi63
Postbiotic-based recombinant receptor activator of NF-κB ligand enhanced oral vaccine efficiency in chicken63
Mushroom β-glucans: application and innovation for food industry and immunotherapy61
Heterologous expressing melittin in a probiotic yeast to evaluate its function for promoting NSC-34 regeneration61
Identification of a protective Bacteroides strain of alcoholic liver disease and its synergistic effect with pectin61
Effects of rice-prawn (Macrobrachium nipponense) co-culture on the microbial community of soil58
Microbial elimination of carbamate pesticides: specific strains and promising enzymes58
Geographic and position-based variations in phyllospheric bacterial communities present on flue-cured tobacco54
Identification of Burkholderia cenocepacia non-coding RNAs expressed during Caenorhabditis elegans infection53
Sequential fungal pretreatment of unsterilized Miscanthus: changes in composition, cellulose digestibility and microbial communities53
Adaptive evolution of Salmonella Typhimurium LT2 exposed to carvacrol lacks a uniform pattern51
Antifungal characterizations of a novel endo-β-1,6-glucanase from Flavobacterium sp. NAU165951
The many functions of carbohydrate-active enzymes in family GH65: diversity and application51
Effect of P availability on straw-induced priming effect was mainly regulated by fungi in croplands50
Biotechnology of banana (Musa spp.): multi-dimensional progress and prospect of in vitro–mediated system50
Eukaryotic community composition and dynamics during solid waste decomposition50
Shifting the distribution: modulation of the lipid profile in Yarrowia lipolytica via iron content49
Gibberellic acid overproduction in Fusarium fujikuroi using regulatory modification and transcription analysis49
Mechanisms of microbial co-aggregation in mixed anaerobic cultures49
Quorum quenching effect of cyclodextrins on the pyocyanin and pyoverdine production of Pseudomonas aeruginosa48
The serine/threonine protein kinase MpSTE1 directly governs hyphal branching in Monascus spp.48
Synthesis of polymeric nanoparticles by double emulsion and pH-driven: encapsulation of antibiotics and natural products for combating Escherichia coli infections47
Basidiomycota strains as whole-cell biocatalysts for the synthesis of high-value natural benzaldehydes47
Physiological benefits of Akkermansia muciniphila under high-altitude hypoxia47
Impact of Bacillus licheniformis from yaks following antibiotic therapy in mouse model45
Mycorrhizal symbiosis and the nitrogen nutrition of forest trees45
New emerging materials with potential antibacterial activities45
Factors affecting the isolation and diversity of marine sponge-associated bacteria45
Unveiling the importance of the C-terminus in the sugar acid dehydratase of the IlvD/EDD superfamily44
Unveiling the repressive mechanism of a PPS-like regulator (PspR) in polyhydroxyalkanoates biosynthesis network44
Sensing chemical-induced DNA damage using CRISPR/Cas9-mediated gene-deletion yeast-reporter strains44
Polyethylenimine linked with chitosan improves astaxanthin production in Haematococcus pluvialis44
A novel dual-epigenetic inhibitor enhances recombinant monoclonal antibody expression in CHO cells44
Development of shuttle vectors for rapid prototyping of engineered Synechococcus sp. PCC700244
Identification of traits to improve co-assimilation of glucose and xylose by adaptive evolution of Spathaspora passalidarum and Scheffersomyces stipitis yeasts43
Ferritin from Mycobacterium abscessus is involved in resistance to antibiotics and oxidative stress43
Clustered surface amino acid residues modulate the acid stability of GH10 xylanase in fungi43
Improved recombinant expression of soluble cathepsin B and L in Escherichia coli42
Bifunctional peptides as alternatives to copper-based formulations to control citrus canker42
A large-scale whole-genome sequencing analysis reveals false positives of bacterial essential genes42
Analysis of substrate specificity of cytochrome P450 monooxygenases involved in trichothecene toxin biosynthesis41
Co-transfer of plasmid-encoded bla carbapenemases genes and mercury resistance operon in high-risk clones of Klebsiella pneumoniae40
Degradation mechanism of difructose dianhydride III in Blautia species40
Silver nanoparticle effect on Salmonella enterica isolated from Northern West Egypt food, poultry, and calves39
Photosynthetic performance of Chlamydopodium (Chlorophyta) cultures grown in outdoor bioreactors39
Construction of a novel filamentous fungal protein expression system based on redesigning of regulatory elements39
Functions and substrate selectivity of diacylglycerol acyltransferases from Mortierella alpina38
Rescuing humanity by antimicrobial peptides against colistin-resistant bacteria38
Biosensing systems for the detection and quantification of methane gas38
Multiple amplification-based fluorometric aptasensor for highly sensitive detection of Staphylococcus aureus38
Temporal variations of bacterial and eukaryotic community in coastal waters—implications for aquaculture38
Using dielectrophoretic spectra to identify and separate viable yeast cells37
Genetic analysis of acyl-CoA carboxylases involved in lipid accumulation in Rhodococcus jostii RHA136
Enhanced chlorobenzene removal by internal magnetic field through initial cell adhesion and biofilm formation36
Enantioselectivity and key residue of Herbaspirillum huttiense monooxygenase in asymmetric epoxidation of styrenes35
Tailor-made solvents for microbial carotenoids recovery35
Environmental modulation of exopolysaccharide production in the cyanobacterium Synechocystis 680335
Alteration of oral bacteriome of smokeless tobacco users and their association with oral cancer34
Green synthesized Ag nanoparticles stimulate gene expression and paclitaxel production in Corylus avellana cells34
Development and evaluation of rapid and accurate one-tube RPA-CRISPR-Cas12b-based detection of mcr-1 and tet(X4)34
Metabolic engineering of Shewanella oneidensis to produce glutamate and itaconic acid34
Research progress and application of enzymatic synthesis of glycosyl compounds34
Enzymatic upcycling of wild-simulated ginseng leaves for enhancing biological activities and compound K33
Enhancing β-alanine production from glucose in genetically modified Corynebacterium glutamicum by metabolic pathway engineering33
Induction and metabolomic analysis of hairy roots of Atractylodes lancea33
Identification of a plastic-degrading enzyme from Cryptococcus nemorosus and its use in self-degradable plastics33
Brij-58 supplementation enhances menaquinone-7 biosynthesis and secretion in Bacillus natto33
Development of multiplex allele-specific RT-qPCR assays for differentiation of SARS-CoV-2 Omicron subvariants32
Updated component analysis method for naturally occurring sophorolipids from Starmerella bombicola32
Effect of micro-aeration on syntrophic and methanogenic activity in anaerobic sludge32
Unraveling endophytic diversity in dioecious Siraitia grosvenorii: implications for mogroside production32
Beauveria bassiana transcriptomics reveal virulence-associated shifts during insect lipid assimilation32
Biological activity of oxadiazole and thiadiazole derivatives31
Intestinal microbial community well explain larval growth than feed types31
A method for the analysis of methylmercury and total Hg in fungal matrices31
New temperature-switchable acyl homoserine lactone-regulated expression vector31
Novel yeast-based biosensor for environmental monitoring of tebuconazole31
An enhanced activity and thermostability of chimeric Bst DNA polymerase for isothermal amplification applications30
Use of red, far-red, and near-infrared light in imaging of yeasts and filamentous fungi30
Properties and biotechnological applications of microbial deacetylase30
Correction to: Strategy for the design of a bioreactor for L-lysine immobilized fermentation using Corynebacterium glutamicun30
Agri-biotechnology of coriander (Coriandrum sativum L.): an inclusive appraisal30
Gn protein expressed in plants for diagnosis of severe fever with thrombocytopenia syndrome virus29
Genetic structure and population diversity of Phytophthora infestans strains in Pacific western Canada29
Functional and structural analysis of a cyclization domain in a cyclic β-1,2-glucan synthase29
Biotechnological production of bacosides from cell and organ cultures of Bacopa monnieri29
Roles of pH and phosphate in rare earth element biosorption with living acidophilic microalgae29
Monkeypox virus A29L protein as the target for specific diagnosis and serological analysis28
Elimination of editing plasmid mediated by theophylline riboswitch in Zymomonas mobilis28
Yeast cell vacuum infusion into fungal pellets as a novel cell encapsulation methodology28
Correction to: Thermostability engineering of industrial enzymes through structure modification28
Reconstitution of (1→3)-β-D-glucans measurement system using recombinant Limulus polyphemus Factor G28
Aspergillus oryzae PrtR alters transcription of individual peptidase genes in response to the growth environment27
LL-37_Renalexin hybrid peptide exhibits antimicrobial activity at lower MICs than its counterpart single peptides27
Enhancing the productivity and proliferation of CHO-K1 cells by oncoprotein YAP (Yes-associated protein)27
Pseudomonadota in the oral cavity: a glimpse into the environment-human nexus27
Drug repositioning: doxazosin attenuates the virulence factors and biofilm formation in Gram-negative bacteria27
Distinct roles of carbohydrate-binding modules in multidomain β-1,3–1,4-glucanase on polysaccharide degradation27
Understanding the Streptomyces albulus response to low-pH stress at the interface of physiology and transcriptomics27
Towards chlorocytes for therapeutic intravascular photosynthesis27
Genomics analysis of KPC-2 and NDM-5-producing Enterobacteriaceae in migratory birds from Qinghai Lake, China26
Rapid growth of antimicrobial resistance: the role of agriculture in the problem and the solutions26
Autotrophic lactate production from H2 + CO2 using recombinant and fluorescent FAST-tagged Acetobacterium woodii strains26
Poly-β-hydroxybutyrate production by Synechocystis MT_a24 in a raceway pond using urban wastewater26
Is heterogeneity in large-scale bioreactors a real problem in recombinant protein synthesis by Pichia pastoris?26
Microbial ecology of biofiltration used for producing safe drinking water26
Fungal communities are more sensitive to mildew than bacterial communities during tobacco storage processes26
Prevalence of Escherichia coli in electrogenic biofilm on activated carbon in microbial fuel cell26
A study on the association between gut microbiota, inflammation, and type 2 diabetes26
Bacteriophage cocktail for biocontrol of soft rot disease caused by Pectobacterium species in Chinese cabbage26
DNA extraction leads to bias in bacterial quantification by qPCR26
Key insights into secondary metabolites from various Chaetomium species26
Enhancing Escherichia coli abiotic stress resistance through ornithine lipid formation25
Correction to: Production and applications of fluorobody from redox-engineered Escherichia coli25
Combinatorial metabolic engineering enables high yield production of α-arbutin from sucrose by biocatalysis25
Rapamycin enhanced the production of 2-phenylethanol during whole-cell bioconversion by yeast25
Dynamics and regulatory role of circRNAs in Asian honey bee larvae following fungal infection25
Fungal carboxylate transporters: recent manipulations and applications25
Random mutagenesis and disulfide bond formation improved thermostability in microbial transglutaminase25
PTT-quant: a new method for direct identification and absolute quantification of premature transcription termination events, following the example of bacterial riboswitches25
A new blocking ELISA for detection of foot-and-mouth disease non-structural protein (NSP) antibodies in a broad host range25
Textiles as fomites in the healthcare system25
Nitrogen source as a modulator of the metabolic activity of Pedobacter lusitanus NL19: a transcriptomic approach25
Aromatic residues in N-terminal domain of archaeal trehalase affect the folding and activity of catalytic domain24
Manganese reductive dissolution coupled to Sb mobilization in contaminated shooting range soil24
Phage cocktail alleviated type 2 diabetes by reshaping gut microbiota and decreasing proinflammatory cytokines24
Enhancement of anti-tumor activity in melanoma using arginine deiminase fused with 30Kc19α protein24
Photoheterotroph improved the growth and nutrient levels of Chlorella vulgaris and the related molecular mechanism24
Improved live-cell PCR method for detection of organophosphates degrading opd genes and applications24
Validation of housekeeping genes as internal controls for gene expression studies on biofilm formation in Bacillus velezensis24
Recombinant mannan-binding lectin magnetic beads increase pathogen detection in immunocompromised patients24
Role of AtYap1 in the reactive oxygen species regulation of lovastatin production in Aspergillus terreus24
The physicochemical approaches of altering growth and biochemical properties of medicinal plants in saline soils24
Redesign of γ-glutamyl transpeptidase from Bacillus subtilis for high-level production of L-theanine by cavity topology engineering24
Dental plaque microbiota sequence counts for microbial profiling and resistance genes detection23
Black yeasts in hypersaline conditions23
Application of recombinant TGF-β1 inhibitory peptide to alleviate isoproterenol-induced cardiac fibrosis23
Biochemical and genetic characterization comparison of four extradiol dioxygenases in Rhizorhabdus wittichii RW123
Rerouting phytosterol degradation pathway for directed androst-1,4-diene-3,17-dione microbial bioconversion23
Roles of cigar microbes in flavor formation during roasted-rice leachate fermentation23
Community composition of phytopathogenic fungi significantly influences ectomycorrhizal fungal communities during subtropical forest succession23
Biotechnological applications of biofilms formed by osmotolerant and halotolerant yeasts23
Characterization of the exopolymer-producing Pseudoalteromonas sp. S8-8 from Antarctic sediment23
Life and death of Pseudokirchneriella subcapitata: physiological changes during chronological aging23
A photobioreactor for production of algae biomass from gaseous emissions of an animal house23
Impact of organic solvents on the catalytic performance of halohydrin dehalogenase22
Characterization of an extracellular α-xylosidase involved in xyloglucan degradation in Aspergillus oryzae22
Helicobacter pylori promotes gastric cancer progression through the tumor microenvironment22
Microbial astaxanthin: from bioprocessing to the market recognition22
Thermostability engineering of industrial enzymes through structure modification22
Biological cellulose saccharification using a coculture of Clostridium thermocellum and Thermobrachium celere strain A922
CRISPR-Cas system: from diagnostic tool to potential antiviral treatment22
Evolutionary and reverse engineering to increase Saccharomyces cerevisiae tolerance to acetic acid, acidic pH, and high temperature21
60Coγ induction improves the protective effect of Acetobacter pasteurianus against ionizing radiation in mice21
P26 enhances baculovirus gene delivery by modulating the mammalian antiviral response21
Enhanced selenocysteine biosynthesis for seleno-methylselenocysteine production in Bacillus subtilis21
Flavonoids from Sedum aizoon L. inhibit Botrytis cinerea by negatively affecting cell membrane lipid metabolism21
Nitrogen balance and supply in Australasian mushroom composts21
Discovery, characterization, and synthetic potential of two novel bacterial aryl-alcohol oxidases21
Machine learning: its challenges and opportunities in plant system biology21
A novel double antibody sandwich quantitative ELISA for detecting porcine epidemic diarrhea virus infection21
PEGylation increases antitumoral activity of arginine deiminase of Streptococcus pyogenes21
Enhancing the imidase activity of BpIH toward 3-isobutyl glutarimide via semi-rational design21
Rhodotorula sp.–based biorefinery: a source of valuable biomolecules21
Microbial electrosynthesis of methane and acetate—comparison of pure and mixed cultures21
Mycelial differentiation linked avermectin production in Streptomyces avermitilis studied with Raman imaging21
Enhancing regioselectivity of sucrose phosphorylase by loop engineering for glycosylation of l-ascorbic acid21
Kinetics and products of Thermotoga maritima β-glucosidase with lactose and cellobiose21
Biosynthesis of animal-free recombinant chondroitin sulfate E using a functional chondroitin sulfotransferase in E. coli21
Characterization and immunological effect of outer membrane vesicles from Pasteurella multocida on macrophages21
Effects of compound prebiotics as prophylactic and therapeutic supplementation in a mouse model of acute colitis20
Metagenomics analysis reveals differences in rumen microbiota in cows with low and high milk protein percentage20
New insights into microbial interactions and putative competitive mechanisms during the hydrogen production from tequila vinasses20
Antimicrobial activity of lipids extracted from Hermetia illucens reared on different substrates20
A new function of a putative UDP-glucose 4-epimerase on the expression of glycoside hydrolase genes in Aspergillus aculeatus20
Colloidal gold and fluorescent immunochromatographic test strips for canine parvovirus detection20
Characterization of a novel tetravalent botulism antitoxin based on receptor-binding domain of BoNTs20
Microbial associations for bioremediation. What does “microbial consortia” mean?20
Membrane fatty acid desaturase: biosynthesis, mechanism, and architecture20
Acyl carrier protein tag can enhance tobacco etch virus protease stability and promote its covalent immobilisation20
Enhancing catalytic efficiency of Bacillus subtilis laccase BsCotA through active site pocket design20
High molecular/low acetylated chitosans reduce adhesion of Campylobacter jejuni to host cells by blocking JlpA20
Developing a separation system to enable real-time recovery of acetone-butanol during fermentation20
Maternal amoxicillin affects piglets colon microbiota: microbial ecology and metabolomics in a gut model20
Correlation study on microbial communities and volatile flavor compounds in cigar tobacco leaves of diverse origins19
Halophilic archaea as tools for bioremediation technologies19
Canine Mucosal Artificial Colon: development of a new colonic in vitro model adapted to dog sizes19
Digital PCR: a tool in clostridial mutant selection and detection19
Development of high-copy number plasmids in Pseudoalteromonas haloplanktis TAC12519
Engineering D-glucose utilization in Azospirillum brasilense Sp7 promotes rice root colonization19
Identifying environmental factors affecting the microbial community composition on outdoor structural timber19
High fat diet–induced hyperlipidemia and tissue steatosis in rabbits through modulating ileal microbiota19
Establishment of an indirect ELISA for Mycobacterium tuberculosis MTB39A protein antibody19
Sodium butyrate supplementation impacts the gastrointestinal bacteria of dairy calves before weaning19
Microbial and enzymatic battle with food contaminant zearalenone (ZEN)19
Recombinant production and characterization of L-glutaminase (glsA) as a promiscuity therapeutic enzyme19
Aptamer-based technology for detecting Bacillus subtilis in soil19
Restoration of cefixime-induced gut microbiota changes by a prebiotic blend in a mouse model19
The reliance of glycerol utilization by Cupriavidus necator on CO2 fixation and improved glycerol catabolism19
Effect of soil bioremediation on soil microbial community structure aimed at controlling tobacco bacterial wilt19
Transcriptomic profiling of nitrogen fixation and the role of NifA in Methylomicrobium buryatense 5GB119
Arabinan hydrolysis by GH43 enzymes of Hungateiclostridium clariflavum and the potential synergistic mechanisms19
Mechanisms of interactions between bacteria and bacteriophage mediate by quorum sensing systems19
Biotechnological approaches for suppressing Microcystis blooms: insights and challenges19
Phage therapeutics: from promises to practices and prospectives18
Real-time metabolic heat-based specific growth rate soft sensor for monitoring and control of high molecular weight hyaluronic acid production by Streptococcus zooepidemicus18
Tuning the catalytic performances of a sucrose isomerase for production of isomaltulose with high concentration18
DnaJ, a promising vaccine candidate against Ureaplasma urealyticum infection18
Alocasia odora–mediated synthesis of silver nanoparticles, their cytotoxicity, and virucidal potential18
Gravity sedimentation of eukaryotic algae Euglena gracilis accelerated by ethanol cultivation18
Developing efficient vanillin biosynthesis system by regulating feruloyl-CoA synthetase and enoyl-CoA hydratase enzymes18
The alteration of intestinal mucosal α-synuclein expression and mucosal microbiota in Parkinson’s disease18
Oral microbiota in preschoolers with rampant caries: a matched case–control study18
Membrane protein Bcsdr2 mediates biofilm integrity, hyphal growth and virulence of Botrytis cinerea18
Optimization of welan gum extraction and purification using lysozyme and alkaline protease18
L-Arginine enhanced perylenequinone production in the endophytic fungus Shiraia sp. Slf14(w) via NO signaling pathway18
Comparison of iSeq and MiSeq as the two platforms for 16S rRNA sequencing in the study of the gut of rat microbiome18
China’s environmental solutions18
Characterisation of cytotoxicity and immunomodulatory effects of glycolipid biosurfactants on human keratinocytes18
Pharmacokinetics and pharmacodynamics of antibacterial peptide NZX in Staphylococcus aureus mastitis mouse model18
Fabrication of cell plastics composed only of unicellular green alga Chlamydomonas reinhardtii as a raw material18
Pathway crosstalk between the central metabolic and heme biosynthetic pathways in Phanerochaete chrysosporium18
Exploring Rhodospirillum rubrum response to high doses of carbon monoxide under light and dark conditions18
Vertical distribution of Candidatus Methylomirabilis and Methanoperedens in agricultural soils18
Antimicrobial resistance: new insights and therapeutic implications18
A novel Saclayvirus Acinetobacter baumannii phage genomic analysis and effectiveness in preventing pneumonia18
Valine feeding reduces ammonia production through rearrangement of metabolic fluxes in central carbon metabolism of CHO cells18
β-oxidation–polyhydroxyalkanoates synthesis relationship in Pseudomonas putida KT2440 revisited17
Microbial community development during syngas methanation in a trickle bed reactor with various nutrient sources17
Transcription factors enhancing synthesis of recombinant proteins and resistance to stress in Yarrowia lipolytica17
A practical approach to producing isomaltomegalosaccharide using dextran dextrinase from Gluconobacter oxydans ATCC 1189417
Correction: Comprehensive metagenomic analysis of stress‑resistant and‑sensitive Listeria monocytogenes17
The potential role of plant secondary metabolites on antifungal and immunomodulatory effect17
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