Applied Microbiology and Biotechnology

Papers
(The TQCC of Applied Microbiology and Biotechnology is 13. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-01-01 to 2026-01-01.)
ArticleCitations
Correction to: Impacts of elicitors on metabolite production and on antioxidant potential and tyrosinase inhibition in watercress microshoot cultures303
Some novel features of strong promoters discovered in Cytophaga hutchinsonii204
Sequential uptake of aldoses over fructose and enhanced phosphate solubilization in Rhizobium sp. RM176
Basidiomycota strains as whole-cell biocatalysts for the synthesis of high-value natural benzaldehydes168
Development of shuttle vectors for rapid prototyping of engineered Synechococcus sp. PCC7002144
Rare earth contamination of edible vegetation: Ce, La, and summed REE in fungi129
Sequential fungal pretreatment of unsterilized Miscanthus: changes in composition, cellulose digestibility and microbial communities127
Biotechnological and endophytic-mediated production of centellosides in Centella asiatica106
Postbiotic-based recombinant receptor activator of NF-κB ligand enhanced oral vaccine efficiency in chicken87
Identification of Burkholderia cenocepacia non-coding RNAs expressed during Caenorhabditis elegans infection84
Biovalorisation of agro-industrial wastes into astaxanthin by Xanthophyllomyces dendrorhous81
Shifting the distribution: modulation of the lipid profile in Yarrowia lipolytica via iron content80
Assessing the functional diversity of rhizobacteria from cacao by partitioning root and shoot biomasses74
The serine/threonine protein kinase MpSTE1 directly governs hyphal branching in Monascus spp.72
Antifungal characterizations of a novel endo-β-1,6-glucanase from Flavobacterium sp. NAU165971
Physiological benefits of Akkermansia muciniphila under high-altitude hypoxia68
Characterization of a novel broad-spectrum endolysin PlyD4 encoded by a highly conserved prophage found in Aeromonas hydrophila ST251 strains68
Adaptive evolution of Salmonella Typhimurium LT2 exposed to carvacrol lacks a uniform pattern64
Optimization and cholesterol-lowering activity of exopolysaccharide from Lactiplantibacillus paraplantarum NCCP 96264
Identification of a protective Bacteroides strain of alcoholic liver disease and its synergistic effect with pectin61
Factors affecting the isolation and diversity of marine sponge-associated bacteria57
Heterologous expressing melittin in a probiotic yeast to evaluate its function for promoting NSC-34 regeneration56
Effects of mokF gene deletion and overexpression on the Monacolin K metabolism yields of Monascus purpureus54
Eukaryotic community composition and dynamics during solid waste decomposition54
Effects of rice-prawn (Macrobrachium nipponense) co-culture on the microbial community of soil54
Chimeric lipoproteins for leptospirosis vaccine: immunogenicity and protective potential54
Microbial elimination of carbamate pesticides: specific strains and promising enzymes54
Synergistic corrosion effects of magnetite and microorganisms: microbial community dependency54
Synergism between metallic nanoparticles and antibiotics53
Mechanisms of microbial co-aggregation in mixed anaerobic cultures52
The many functions of carbohydrate-active enzymes in family GH65: diversity and application51
Biodegradation of polyurethane by the microbial consortia enriched from landfill51
Impact of Bacillus licheniformis from yaks following antibiotic therapy in mouse model51
Mycorrhizal symbiosis and the nitrogen nutrition of forest trees51
Effects of reducing, stabilizing, and antibiotic agents on “Candidatus Kuenenia stuttgartiensis”50
Development of efficient 5-ketogluconate production system by Gluconobacter japonicus50
Gibberellic acid overproduction in Fusarium fujikuroi using regulatory modification and transcription analysis49
Mushroom β-glucans: application and innovation for food industry and immunotherapy49
Biotechnology of banana (Musa spp.): multi-dimensional progress and prospect of in vitro–mediated system49
New emerging materials with potential antibacterial activities48
Synthesis of polymeric nanoparticles by double emulsion and pH-driven: encapsulation of antibiotics and natural products for combating Escherichia coli infections48
Quorum quenching effect of cyclodextrins on the pyocyanin and pyoverdine production of Pseudomonas aeruginosa48
Sensing chemical-induced DNA damage using CRISPR/Cas9-mediated gene-deletion yeast-reporter strains47
Polyethylenimine linked with chitosan improves astaxanthin production in Haematococcus pluvialis47
Unveiling the importance of the C-terminus in the sugar acid dehydratase of the IlvD/EDD superfamily47
Rescuing humanity by antimicrobial peptides against colistin-resistant bacteria46
Degradation mechanism of difructose dianhydride III in Blautia species46
Induction and metabolomic analysis of hairy roots of Atractylodes lancea45
Development and evaluation of rapid and accurate one-tube RPA-CRISPR-Cas12b-based detection of mcr-1 and tet(X4)44
Intestinal microbial community well explain larval growth than feed types41
A method for the analysis of methylmercury and total Hg in fungal matrices41
Enzymatic upcycling of wild-simulated ginseng leaves for enhancing biological activities and compound K41
Genetic analysis of acyl-CoA carboxylases involved in lipid accumulation in Rhodococcus jostii RHA140
Environmental modulation of exopolysaccharide production in the cyanobacterium Synechocystis 680340
Green synthesized Ag nanoparticles stimulate gene expression and paclitaxel production in Corylus avellana cells39
Unveiling the repressive mechanism of a PPS-like regulator (PspR) in polyhydroxyalkanoates biosynthesis network39
Analysis of substrate specificity of cytochrome P450 monooxygenases involved in trichothecene toxin biosynthesis39
Identification of traits to improve co-assimilation of glucose and xylose by adaptive evolution of Spathaspora passalidarum and Scheffersomyces stipitis yeasts39
Using dielectrophoretic spectra to identify and separate viable yeast cells38
Enhanced chlorobenzene removal by internal magnetic field through initial cell adhesion and biofilm formation38
Biosensing systems for the detection and quantification of methane gas38
Ferritin from Mycobacterium abscessus is involved in resistance to antibiotics and oxidative stress37
Metabolic engineering of Shewanella oneidensis to produce glutamate and itaconic acid37
Development of multiplex allele-specific RT-qPCR assays for differentiation of SARS-CoV-2 Omicron subvariants36
Identification of a plastic-degrading enzyme from Cryptococcus nemorosus and its use in self-degradable plastics36
Multiple amplification-based fluorometric aptasensor for highly sensitive detection of Staphylococcus aureus36
Novel yeast-based biosensor for environmental monitoring of tebuconazole36
Functions and substrate selectivity of diacylglycerol acyltransferases from Mortierella alpina36
Effect of micro-aeration on syntrophic and methanogenic activity in anaerobic sludge35
Unraveling endophytic diversity in dioecious Siraitia grosvenorii: implications for mogroside production35
Research progress and application of enzymatic synthesis of glycosyl compounds35
Brij-58 supplementation enhances menaquinone-7 biosynthesis and secretion in Bacillus natto35
Updated component analysis method for naturally occurring sophorolipids from Starmerella bombicola35
Alteration of oral bacteriome of smokeless tobacco users and their association with oral cancer35
A novel dual-epigenetic inhibitor enhances recombinant monoclonal antibody expression in CHO cells34
Photosynthetic performance of Chlamydopodium (Chlorophyta) cultures grown in outdoor bioreactors34
Enantioselectivity and key residue of Herbaspirillum huttiense monooxygenase in asymmetric epoxidation of styrenes34
Biological activity of oxadiazole and thiadiazole derivatives34
Construction of a novel filamentous fungal protein expression system based on redesigning of regulatory elements34
Bifunctional peptides as alternatives to copper-based formulations to control citrus canker33
Tailor-made solvents for microbial carotenoids recovery33
Temporal variations of bacterial and eukaryotic community in coastal waters—implications for aquaculture33
Agri-biotechnology of coriander (Coriandrum sativum L.): an inclusive appraisal33
New temperature-switchable acyl homoserine lactone-regulated expression vector32
Silver nanoparticle effect on Salmonella enterica isolated from Northern West Egypt food, poultry, and calves32
Clustered surface amino acid residues modulate the acid stability of GH10 xylanase in fungi32
Beauveria bassiana transcriptomics reveal virulence-associated shifts during insect lipid assimilation32
Improved recombinant expression of soluble cathepsin B and L in Escherichia coli32
An enhanced activity and thermostability of chimeric Bst DNA polymerase for isothermal amplification applications32
Use of red, far-red, and near-infrared light in imaging of yeasts and filamentous fungi31
Monkeypox virus A29L protein as the target for specific diagnosis and serological analysis31
Correction to: Strategy for the design of a bioreactor for L-lysine immobilized fermentation using Corynebacterium glutamicun31
Gn protein expressed in plants for diagnosis of severe fever with thrombocytopenia syndrome virus31
Textiles as fomites in the healthcare system30
Rapid growth of antimicrobial resistance: the role of agriculture in the problem and the solutions30
Poly-β-hydroxybutyrate production by Synechocystis MT_a24 in a raceway pond using urban wastewater30
Key insights into secondary metabolites from various Chaetomium species30
Autotrophic lactate production from H2 + CO2 using recombinant and fluorescent FAST-tagged Acetobacterium woodii strains30
Dynamics and regulatory role of circRNAs in Asian honey bee larvae following fungal infection30
Fungal communities are more sensitive to mildew than bacterial communities during tobacco storage processes29
Yeast cell vacuum infusion into fungal pellets as a novel cell encapsulation methodology29
Aspergillus oryzae PrtR alters transcription of individual peptidase genes in response to the growth environment29
Understanding the Streptomyces albulus response to low-pH stress at the interface of physiology and transcriptomics29
Prevalence of Escherichia coli in electrogenic biofilm on activated carbon in microbial fuel cell29
Genomics analysis of KPC-2 and NDM-5-producing Enterobacteriaceae in migratory birds from Qinghai Lake, China28
Enhancing Escherichia coli abiotic stress resistance through ornithine lipid formation28
Genetic structure and population diversity of Phytophthora infestans strains in Pacific western Canada28
LL-37_Renalexin hybrid peptide exhibits antimicrobial activity at lower MICs than its counterpart single peptides28
Reconstitution of (1→3)-β-D-glucans measurement system using recombinant Limulus polyphemus Factor G28
Enhancing the productivity and proliferation of CHO-K1 cells by oncoprotein YAP (Yes-associated protein)28
Is heterogeneity in large-scale bioreactors a real problem in recombinant protein synthesis by Pichia pastoris?28
Towards chlorocytes for therapeutic intravascular photosynthesis28
Elimination of editing plasmid mediated by theophylline riboswitch in Zymomonas mobilis28
Roles of pH and phosphate in rare earth element biosorption with living acidophilic microalgae27
Properties and biotechnological applications of microbial deacetylase27
A new blocking ELISA for detection of foot-and-mouth disease non-structural protein (NSP) antibodies in a broad host range27
Correction to: Thermostability engineering of industrial enzymes through structure modification27
Distinct roles of carbohydrate-binding modules in multidomain β-1,3–1,4-glucanase on polysaccharide degradation27
Drug repositioning: doxazosin attenuates the virulence factors and biofilm formation in Gram-negative bacteria27
A study on the association between gut microbiota, inflammation, and type 2 diabetes27
Functional and structural analysis of a cyclization domain in a cyclic β-1,2-glucan synthase27
DNA extraction leads to bias in bacterial quantification by qPCR27
Microbial ecology of biofiltration used for producing safe drinking water27
Pseudomonadota in the oral cavity: a glimpse into the environment-human nexus27
Bacteriophage cocktail for biocontrol of soft rot disease caused by Pectobacterium species in Chinese cabbage26
Enhancement of anti-tumor activity in melanoma using arginine deiminase fused with 30Kc19α protein26
Recombinant mannan-binding lectin magnetic beads increase pathogen detection in immunocompromised patients26
Nitrogen source as a modulator of the metabolic activity of Pedobacter lusitanus NL19: a transcriptomic approach26
Correction to: Production and applications of fluorobody from redox-engineered Escherichia coli26
Impact of organic solvents on the catalytic performance of halohydrin dehalogenase26
Role of AtYap1 in the reactive oxygen species regulation of lovastatin production in Aspergillus terreus26
Biotechnological production of bacosides from cell and organ cultures of Bacopa monnieri26
Aromatic residues in N-terminal domain of archaeal trehalase affect the folding and activity of catalytic domain26
Discovery, characterization, and synthetic potential of two novel bacterial aryl-alcohol oxidases26
Roles of cigar microbes in flavor formation during roasted-rice leachate fermentation25
Life and death of Pseudokirchneriella subcapitata: physiological changes during chronological aging25
Biochemical and genetic characterization comparison of four extradiol dioxygenases in Rhizorhabdus wittichii RW125
Photoheterotroph improved the growth and nutrient levels of Chlorella vulgaris and the related molecular mechanism25
Biological cellulose saccharification using a coculture of Clostridium thermocellum and Thermobrachium celere strain A925
Community composition of phytopathogenic fungi significantly influences ectomycorrhizal fungal communities during subtropical forest succession25
Black yeasts in hypersaline conditions25
Rerouting phytosterol degradation pathway for directed androst-1,4-diene-3,17-dione microbial bioconversion25
Redesign of γ-glutamyl transpeptidase from Bacillus subtilis for high-level production of L-theanine by cavity topology engineering24
Nitrogen balance and supply in Australasian mushroom composts24
Improved live-cell PCR method for detection of organophosphates degrading opd genes and applications24
Microbial electrosynthesis of methane and acetate—comparison of pure and mixed cultures24
Rapamycin enhanced the production of 2-phenylethanol during whole-cell bioconversion by yeast24
Validation of housekeeping genes as internal controls for gene expression studies on biofilm formation in Bacillus velezensis24
Manganese reductive dissolution coupled to Sb mobilization in contaminated shooting range soil24
Application of recombinant TGF-β1 inhibitory peptide to alleviate isoproterenol-induced cardiac fibrosis23
Mycelial differentiation linked avermectin production in Streptomyces avermitilis studied with Raman imaging23
Combinatorial metabolic engineering enables high yield production of α-arbutin from sucrose by biocatalysis23
PTT-quant: a new method for direct identification and absolute quantification of premature transcription termination events, following the example of bacterial riboswitches23
Random mutagenesis and disulfide bond formation improved thermostability in microbial transglutaminase22
Microbial astaxanthin: from bioprocessing to the market recognition22
Rhodotorula sp.–based biorefinery: a source of valuable biomolecules22
The physicochemical approaches of altering growth and biochemical properties of medicinal plants in saline soils22
Biotechnological applications of biofilms formed by osmotolerant and halotolerant yeasts22
Phage cocktail alleviated type 2 diabetes by reshaping gut microbiota and decreasing proinflammatory cytokines22
CRISPR-Cas system: from diagnostic tool to potential antiviral treatment22
A photobioreactor for production of algae biomass from gaseous emissions of an animal house22
Dental plaque microbiota sequence counts for microbial profiling and resistance genes detection22
Fungal carboxylate transporters: recent manipulations and applications22
Helicobacter pylori promotes gastric cancer progression through the tumor microenvironment22
Thermostability engineering of industrial enzymes through structure modification22
A novel double antibody sandwich quantitative ELISA for detecting porcine epidemic diarrhea virus infection21
P26 enhances baculovirus gene delivery by modulating the mammalian antiviral response21
Characterization of a novel tetravalent botulism antitoxin based on receptor-binding domain of BoNTs21
Sodium butyrate supplementation impacts the gastrointestinal bacteria of dairy calves before weaning21
Enhancing catalytic efficiency of Bacillus subtilis laccase BsCotA through active site pocket design21
Restoration of cefixime-induced gut microbiota changes by a prebiotic blend in a mouse model21
Enhancing the imidase activity of BpIH toward 3-isobutyl glutarimide via semi-rational design21
A new function of a putative UDP-glucose 4-epimerase on the expression of glycoside hydrolase genes in Aspergillus aculeatus21
Effect of soil bioremediation on soil microbial community structure aimed at controlling tobacco bacterial wilt21
Establishment of an indirect ELISA for Mycobacterium tuberculosis MTB39A protein antibody21
Characterization of the exopolymer-producing Pseudoalteromonas sp. S8-8 from Antarctic sediment21
Biosynthesis of animal-free recombinant chondroitin sulfate E using a functional chondroitin sulfotransferase in E. coli21
Acyl carrier protein tag can enhance tobacco etch virus protease stability and promote its covalent immobilisation21
Enhancing regioselectivity of sucrose phosphorylase by loop engineering for glycosylation of l-ascorbic acid21
Machine learning: its challenges and opportunities in plant system biology21
High molecular/low acetylated chitosans reduce adhesion of Campylobacter jejuni to host cells by blocking JlpA20
High fat diet–induced hyperlipidemia and tissue steatosis in rabbits through modulating ileal microbiota20
Effects of compound prebiotics as prophylactic and therapeutic supplementation in a mouse model of acute colitis20
Characterization and immunological effect of outer membrane vesicles from Pasteurella multocida on macrophages20
Developing a separation system to enable real-time recovery of acetone-butanol during fermentation20
Microbial and enzymatic battle with food contaminant zearalenone (ZEN)20
Digital PCR: a tool in clostridial mutant selection and detection20
New insights into microbial interactions and putative competitive mechanisms during the hydrogen production from tequila vinasses20
The reliance of glycerol utilization by Cupriavidus necator on CO2 fixation and improved glycerol catabolism20
Enhanced selenocysteine biosynthesis for seleno-methylselenocysteine production in Bacillus subtilis20
Kinetics and products of Thermotoga maritima β-glucosidase with lactose and cellobiose20
Microbial associations for bioremediation. What does “microbial consortia” mean?20
Membrane fatty acid desaturase: biosynthesis, mechanism, and architecture20
Membrane protein Bcsdr2 mediates biofilm integrity, hyphal growth and virulence of Botrytis cinerea20
Halophilic archaea as tools for bioremediation technologies20
Metagenomics analysis reveals differences in rumen microbiota in cows with low and high milk protein percentage20
Correlation study on microbial communities and volatile flavor compounds in cigar tobacco leaves of diverse origins20
Colloidal gold and fluorescent immunochromatographic test strips for canine parvovirus detection20
Transcriptomic profiling of nitrogen fixation and the role of NifA in Methylomicrobium buryatense 5GB120
Maternal amoxicillin affects piglets colon microbiota: microbial ecology and metabolomics in a gut model20
Identifying environmental factors affecting the microbial community composition on outdoor structural timber20
Canine Mucosal Artificial Colon: development of a new colonic in vitro model adapted to dog sizes20
Fabrication of cell plastics composed only of unicellular green alga Chlamydomonas reinhardtii as a raw material20
Antimicrobial activity of lipids extracted from Hermetia illucens reared on different substrates20
Flavonoids from Sedum aizoon L. inhibit Botrytis cinerea by negatively affecting cell membrane lipid metabolism20
The application of bacteria-derived dehydrogenases and oxidases in the synthesis of gold nanoparticles19
Gravity sedimentation of eukaryotic algae Euglena gracilis accelerated by ethanol cultivation19
Development of high-copy number plasmids in Pseudoalteromonas haloplanktis TAC12519
Occurrence and dissemination of antibiotic resistance genes in mine soil ecosystems19
Real-time metabolic heat-based specific growth rate soft sensor for monitoring and control of high molecular weight hyaluronic acid production by Streptococcus zooepidemicus19
Oral microbiota in preschoolers with rampant caries: a matched case–control study19
DnaJ, a promising vaccine candidate against Ureaplasma urealyticum infection19
Biotechnological approaches for suppressing Microcystis blooms: insights and challenges19
Bacterial cellulose production by Novacetimonas hansenii MSCL 1646 on apple juice19
Valine feeding reduces ammonia production through rearrangement of metabolic fluxes in central carbon metabolism of CHO cells19
Production of recombinant vesicular stomatitis virus-based vectors by tangential flow depth filtration19
China’s environmental solutions19
L-Arginine enhanced perylenequinone production in the endophytic fungus Shiraia sp. Slf14(w) via NO signaling pathway19
Tuning the catalytic performances of a sucrose isomerase for production of isomaltulose with high concentration19
Transcriptomic responses of the fast-growing bacterium Vibrio natriegens during cold-induced loss of culturability19
A child is not an adult: development of a new in vitro model of the toddler colon19
Optimization of welan gum extraction and purification using lysozyme and alkaline protease19
Discovery and biocatalytic characterization of opine dehydrogenases by metagenome mining19
Comparison of iSeq and MiSeq as the two platforms for 16S rRNA sequencing in the study of the gut of rat microbiome19
Non-growth inhibitory doses of dimethyl sulfoxide alter gene expression and epigenetic pattern of bacteria19
Recombinant production and characterization of L-glutaminase (glsA) as a promiscuity therapeutic enzyme19
Vertical distribution of Candidatus Methylomirabilis and Methanoperedens in agricultural soils19
Genome-scale metabolic network models: from first-generation to next-generation18
Microbial community development during syngas methanation in a trickle bed reactor with various nutrient sources18
Predicted functional genes for the biodegradation of xenobiotics in groundwater and sediment at two contaminated naval sites18
A practical approach to producing isomaltomegalosaccharide using dextran dextrinase from Gluconobacter oxydans ATCC 1189418
Combining high pressure and electric fields towards Nannochloropsis oculata eicosapentaenoic acid-rich extracts18
Arabinan hydrolysis by GH43 enzymes of Hungateiclostridium clariflavum and the potential synergistic mechanisms18
Pathway crosstalk between the central metabolic and heme biosynthetic pathways in Phanerochaete chrysosporium18
Characterisation of cytotoxicity and immunomodulatory effects of glycolipid biosurfactants on human keratinocytes18
Exploring Rhodospirillum rubrum response to high doses of carbon monoxide under light and dark conditions18
A mycofactocin-associated dehydrogenase is essential for ethylene glycol metabolism by Rhodococcus jostii RHA118
β-oxidation–polyhydroxyalkanoates synthesis relationship in Pseudomonas putida KT2440 revisited18
Correction: Comprehensive metagenomic analysis of stress‑resistant and‑sensitive Listeria monocytogenes18
The potential role of plant secondary metabolites on antifungal and immunomodulatory effect18
Mechanisms of interactions between bacteria and bacteriophage mediate by quorum sensing systems18
Transcription factors enhancing synthesis of recombinant proteins and resistance to stress in Yarrowia lipolytica18
Development and evaluation of a blocking ELISA for serological diagnosis of equine infectious anemia18
Engineering D-glucose utilization in Azospirillum brasilense Sp7 promotes rice root colonization18
Alocasia odora–mediated synthesis of silver nanoparticles, their cytotoxicity, and virucidal potential18
The alteration of intestinal mucosal α-synuclein expression and mucosal microbiota in Parkinson’s disease18
Distinction of chia varieties in vivo and in vitro based on the flow cytometry and rosmarinic acid production18
A novel Saclayvirus Acinetobacter baumannii phage genomic analysis and effectiveness in preventing pneumonia18
Antimicrobial resistance: new insights and therapeutic implications18
Aptamer-based technology for detecting Bacillus subtilis in soil18
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