Applied Microbiology and Biotechnology

Papers
(The TQCC of Applied Microbiology and Biotechnology is 11. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-08-01 to 2025-08-01.)
ArticleCitations
Characterization of a novel broad-spectrum endolysin PlyD4 encoded by a highly conserved prophage found in Aeromonas hydrophila ST251 strains256
Development of shuttle vectors for rapid prototyping of engineered Synechococcus sp. PCC7002162
Correction to: The starch-binding domain as a tool for recombinant protein purification147
Correction to: Impacts of elicitors on metabolite production and on antioxidant potential and tyrosinase inhibition in watercress microshoot cultures138
Therapeutic efficacy of new botulinum toxin identified in CCUG 7968 strain133
Assessing the functional diversity of rhizobacteria from cacao by partitioning root and shoot biomasses126
Some novel features of strong promoters discovered in Cytophaga hutchinsonii122
Sequential fungal pretreatment of unsterilized Miscanthus: changes in composition, cellulose digestibility and microbial communities108
Sequential uptake of aldoses over fructose and enhanced phosphate solubilization in Rhizobium sp. RM107
Basidiomycota strains as whole-cell biocatalysts for the synthesis of high-value natural benzaldehydes101
Identification of key residues for efficient glucose transport by the hexose transporter CgHxt4 in high sugar fermentation yeast Candida glycerinogenes91
Mushroom β-glucans: application and innovation for food industry and immunotherapy73
Identification of a protective Bacteroides strain of alcoholic liver disease and its synergistic effect with pectin72
Synergistic corrosion effects of magnetite and microorganisms: microbial community dependency72
Identification of Burkholderia cenocepacia non-coding RNAs expressed during Caenorhabditis elegans infection69
Shifting the distribution: modulation of the lipid profile in Yarrowia lipolytica via iron content67
Adaptive evolution of Salmonella Typhimurium LT2 exposed to carvacrol lacks a uniform pattern67
Factors affecting the isolation and diversity of marine sponge-associated bacteria65
Biotechnological and endophytic-mediated production of centellosides in Centella asiatica64
Eukaryotic community composition and dynamics during solid waste decomposition63
Optimization and cholesterol-lowering activity of exopolysaccharide from Lactiplantibacillus paraplantarum NCCP 96262
Impact of Bacillus licheniformis from yaks following antibiotic therapy in mouse model61
Physiological benefits of Akkermansia muciniphila under high-altitude hypoxia59
Geographic and position-based variations in phyllospheric bacterial communities present on flue-cured tobacco57
Conversion of viridicatic acid to crustosic acid by cytochrome P450 enzyme-catalysed hydroxylation and spontaneous cyclisation57
Biovalorisation of agro-industrial wastes into astaxanthin by Xanthophyllomyces dendrorhous56
The many functions of carbohydrate-active enzymes in family GH65: diversity and application55
Antifungal characterizations of a novel endo-β-1,6-glucanase from Flavobacterium sp. NAU165953
Microbial elimination of carbamate pesticides: specific strains and promising enzymes51
Chimeric lipoproteins for leptospirosis vaccine: immunogenicity and protective potential50
Heterologous expressing melittin in a probiotic yeast to evaluate its function for promoting NSC-34 regeneration49
Postbiotic-based recombinant receptor activator of NF-κB ligand enhanced oral vaccine efficiency in chicken49
The serine/threonine protein kinase MpSTE1 directly governs hyphal branching in Monascus spp.48
Rare earth contamination of edible vegetation: Ce, La, and summed REE in fungi48
Synthesis of polymeric nanoparticles by double emulsion and pH-driven: encapsulation of antibiotics and natural products for combating Escherichia coli infections47
Development of efficient 5-ketogluconate production system by Gluconobacter japonicus47
Effect of P availability on straw-induced priming effect was mainly regulated by fungi in croplands47
Effects of mokF gene deletion and overexpression on the Monacolin K metabolism yields of Monascus purpureus46
Biotechnology of banana (Musa spp.): multi-dimensional progress and prospect of in vitro–mediated system46
Biotechnological interventions of in vitro propagation and production of valuable secondary metabolites in Stevia rebaudiana46
Quorum quenching effect of cyclodextrins on the pyocyanin and pyoverdine production of Pseudomonas aeruginosa46
Effects of reducing, stabilizing, and antibiotic agents on “Candidatus Kuenenia stuttgartiensis”46
Ultra-high irradiance (UHI) blue light: highlighting the potential of a novel LED-based device for short antifungal treatments of food contact surfaces45
Effects of rice-prawn (Macrobrachium nipponense) co-culture on the microbial community of soil45
Gibberellic acid overproduction in Fusarium fujikuroi using regulatory modification and transcription analysis45
Synergism between metallic nanoparticles and antibiotics45
Mycorrhizal symbiosis and the nitrogen nutrition of forest trees44
Biodegradation of polyurethane by the microbial consortia enriched from landfill44
Induction of glutamic acid production by copper in Corynebacterium glutamicum43
Elicitation of biomolecules as host defense arsenals during insect attacks on tea plants (Camellia sinensis (L.) Kuntze) 43
Mechanisms of microbial co-aggregation in mixed anaerobic cultures43
New emerging materials with potential antibacterial activities43
Engineering anaerobic digestion via optimizing microbial community: effects of bactericidal agents, quorum sensing inhibitors, and inorganic materials41
Biosensing systems for the detection and quantification of methane gas41
Development of a competitive ELISA for detecting antibodies against genotype 1 hepatitis E virus41
Research progress and application of enzymatic synthesis of glycosyl compounds41
Construction of a novel filamentous fungal protein expression system based on redesigning of regulatory elements41
Photosynthetic performance of Chlamydopodium (Chlorophyta) cultures grown in outdoor bioreactors40
Ferritin from Mycobacterium abscessus is involved in resistance to antibiotics and oxidative stress40
Co-transfer of plasmid-encoded bla carbapenemases genes and mercury resistance operon in high-risk clones of Klebsiella pneumoniae40
Degradation mechanism of difructose dianhydride III in Blautia species39
Bifunctional peptides as alternatives to copper-based formulations to control citrus canker39
A novel dual-epigenetic inhibitor enhances recombinant monoclonal antibody expression in CHO cells39
Agri-biotechnology of coriander (Coriandrum sativum L.): an inclusive appraisal38
Silver nanoparticle effect on Salmonella enterica isolated from Northern West Egypt food, poultry, and calves38
Induction and metabolomic analysis of hairy roots of Atractylodes lancea37
New temperature-switchable acyl homoserine lactone-regulated expression vector37
A large-scale whole-genome sequencing analysis reveals false positives of bacterial essential genes37
Green synthesized Ag nanoparticles stimulate gene expression and paclitaxel production in Corylus avellana cells36
Polyethylenimine linked with chitosan improves astaxanthin production in Haematococcus pluvialis36
Transcriptome analysis provides new insights into the tolerance and reduction of Lysinibacillus fusiformis 15–4 to hexavalent chromium36
Enhanced chlorobenzene removal by internal magnetic field through initial cell adhesion and biofilm formation36
Multiple amplification-based fluorometric aptasensor for highly sensitive detection of Staphylococcus aureus36
Brij-58 supplementation enhances menaquinone-7 biosynthesis and secretion in Bacillus natto36
Using dielectrophoretic spectra to identify and separate viable yeast cells36
Genetic analysis of acyl-CoA carboxylases involved in lipid accumulation in Rhodococcus jostii RHA136
Enzymatic upcycling of wild-simulated ginseng leaves for enhancing biological activities and compound K35
Improved recombinant expression of soluble cathepsin B and L in Escherichia coli35
Unveiling the importance of the C-terminus in the sugar acid dehydratase of the IlvD/EDD superfamily35
Enantioselectivity and key residue of Herbaspirillum huttiense monooxygenase in asymmetric epoxidation of styrenes35
Sensing chemical-induced DNA damage using CRISPR/Cas9-mediated gene-deletion yeast-reporter strains35
Unraveling endophytic diversity in dioecious Siraitia grosvenorii: implications for mogroside production35
Identification of traits to improve co-assimilation of glucose and xylose by adaptive evolution of Spathaspora passalidarum and Scheffersomyces stipitis yeasts35
Updated component analysis method for naturally occurring sophorolipids from Starmerella bombicola34
Novel yeast-based biosensor for environmental monitoring of tebuconazole34
Metabolic engineering of Shewanella oneidensis to produce glutamate and itaconic acid34
Functions and substrate selectivity of diacylglycerol acyltransferases from Mortierella alpina34
Analysis of substrate specificity of cytochrome P450 monooxygenases involved in trichothecene toxin biosynthesis34
Beauveria bassiana transcriptomics reveal virulence-associated shifts during insect lipid assimilation33
An enhanced activity and thermostability of chimeric Bst DNA polymerase for isothermal amplification applications33
Enhancing β-alanine production from glucose in genetically modified Corynebacterium glutamicum by metabolic pathway engineering33
Intestinal microbial community well explain larval growth than feed types33
A method for the analysis of methylmercury and total Hg in fungal matrices32
Development and evaluation of rapid and accurate one-tube RPA-CRISPR-Cas12b-based detection of mcr-1 and tet(X4)31
Rescuing humanity by antimicrobial peptides against colistin-resistant bacteria31
Clustered surface amino acid residues modulate the acid stability of GH10 xylanase in fungi31
Development of multiplex allele-specific RT-qPCR assays for differentiation of SARS-CoV-2 Omicron subvariants31
Evoglow-Pp1 and mCherry proteins: a dual fluorescent labeling system for lactic acid bacteria31
Effect of micro-aeration on syntrophic and methanogenic activity in anaerobic sludge31
Temporal variations of bacterial and eukaryotic community in coastal waters—implications for aquaculture31
Identification of a plastic-degrading enzyme from Cryptococcus nemorosus and its use in self-degradable plastics31
Alteration of oral bacteriome of smokeless tobacco users and their association with oral cancer31
Environmental modulation of exopolysaccharide production in the cyanobacterium Synechocystis 680331
Towards chlorocytes for therapeutic intravascular photosynthesis30
Roles of pH and phosphate in rare earth element biosorption with living acidophilic microalgae30
Unveiling the repressive mechanism of a PPS-like regulator (PspR) in polyhydroxyalkanoates biosynthesis network30
Biological activity of oxadiazole and thiadiazole derivatives30
Tailor-made solvents for microbial carotenoids recovery30
Understanding the Streptomyces albulus response to low-pH stress at the interface of physiology and transcriptomics30
Use of red, far-red, and near-infrared light in imaging of yeasts and filamentous fungi29
Correction to: Strategy for the design of a bioreactor for L-lysine immobilized fermentation using Corynebacterium glutamicun29
Rapid growth of antimicrobial resistance: the role of agriculture in the problem and the solutions29
Elimination of editing plasmid mediated by theophylline riboswitch in Zymomonas mobilis29
Properties and biotechnological applications of microbial deacetylase29
Biotechnological production of bacosides from cell and organ cultures of Bacopa monnieri29
Correction to: Thermostability engineering of industrial enzymes through structure modification29
Yeast cell vacuum infusion into fungal pellets as a novel cell encapsulation methodology29
Functional and structural analysis of a cyclization domain in a cyclic β-1,2-glucan synthase28
Genetic structure and population diversity of Phytophthora infestans strains in Pacific western Canada28
Textiles as fomites in the healthcare system28
Autotrophic lactate production from H2 + CO2 using recombinant and fluorescent FAST-tagged Acetobacterium woodii strains28
Gn protein expressed in plants for diagnosis of severe fever with thrombocytopenia syndrome virus28
A study on the association between gut microbiota, inflammation, and type 2 diabetes28
Genomics analysis of KPC-2 and NDM-5-producing Enterobacteriaceae in migratory birds from Qinghai Lake, China27
Poly-β-hydroxybutyrate production by Synechocystis MT_a24 in a raceway pond using urban wastewater27
Enhancing Escherichia coli abiotic stress resistance through ornithine lipid formation27
Microbial ecology of biofiltration used for producing safe drinking water27
Monkeypox virus A29L protein as the target for specific diagnosis and serological analysis27
Distinct roles of carbohydrate-binding modules in multidomain β-1,3–1,4-glucanase on polysaccharide degradation27
Bacteriophage cocktail for biocontrol of soft rot disease caused by Pectobacterium species in Chinese cabbage27
Aspergillus oryzae PrtR alters transcription of individual peptidase genes in response to the growth environment27
Dynamics and regulatory role of circRNAs in Asian honey bee larvae following fungal infection26
Pseudomonadota in the oral cavity: a glimpse into the environment-human nexus26
Prevalence of Escherichia coli in electrogenic biofilm on activated carbon in microbial fuel cell26
A new blocking ELISA for detection of foot-and-mouth disease non-structural protein (NSP) antibodies in a broad host range26
Is heterogeneity in large-scale bioreactors a real problem in recombinant protein synthesis by Pichia pastoris?26
Biodegradation of metoprolol in oxic and anoxic hyporheic zone sediments: unexpected effects on microbial communities26
LL-37_Renalexin hybrid peptide exhibits antimicrobial activity at lower MICs than its counterpart single peptides26
Fungal communities are more sensitive to mildew than bacterial communities during tobacco storage processes26
Relevance of Candidatus Nitrotoga for nitrite oxidation in technical nitrogen removal systems25
Enhancement of lysine biosynthesis confers high-temperature stress tolerance to Escherichia coli cells25
Correction to: Production and applications of fluorobody from redox-engineered Escherichia coli25
DNA extraction leads to bias in bacterial quantification by qPCR25
Enhancing the productivity and proliferation of CHO-K1 cells by oncoprotein YAP (Yes-associated protein)25
Drug repositioning: doxazosin attenuates the virulence factors and biofilm formation in Gram-negative bacteria25
Yarrowia lipolytica, health benefits for animals25
Reconstitution of (1→3)-β-D-glucans measurement system using recombinant Limulus polyphemus Factor G25
Key insights into secondary metabolites from various Chaetomium species25
Herbaspirillum seropedicae expresses non-phosphorylative pathways for d-xylose catabolism24
Fungal carboxylate transporters: recent manipulations and applications24
Impact of organic solvents on the catalytic performance of halohydrin dehalogenase24
Enhancement of anti-tumor activity in melanoma using arginine deiminase fused with 30Kc19α protein24
Evolutionary and reverse engineering to increase Saccharomyces cerevisiae tolerance to acetic acid, acidic pH, and high temperature24
Black yeasts in hypersaline conditions24
Biochemical and genetic characterization comparison of four extradiol dioxygenases in Rhizorhabdus wittichii RW124
PTT-quant: a new method for direct identification and absolute quantification of premature transcription termination events, following the example of bacterial riboswitches24
Random mutagenesis and disulfide bond formation improved thermostability in microbial transglutaminase24
An overview of D-galactose utilization through microbial fermentation and enzyme-catalyzed conversion24
Community composition of phytopathogenic fungi significantly influences ectomycorrhizal fungal communities during subtropical forest succession24
Nitrogen balance and supply in Australasian mushroom composts24
60Coγ induction improves the protective effect of Acetobacter pasteurianus against ionizing radiation in mice24
Biotechnological applications of biofilms formed by osmotolerant and halotolerant yeasts24
Combinatorial metabolic engineering enables high yield production of α-arbutin from sucrose by biocatalysis24
A comprehensive method for determining cellular uptake of purine nucleoside phosphorylase and adenylosuccinate synthetase inhibitors by H. pylori24
Rapamycin enhanced the production of 2-phenylethanol during whole-cell bioconversion by yeast24
Nitrogen source as a modulator of the metabolic activity of Pedobacter lusitanus NL19: a transcriptomic approach24
Improved live-cell PCR method for detection of organophosphates degrading opd genes and applications23
Rerouting phytosterol degradation pathway for directed androst-1,4-diene-3,17-dione microbial bioconversion23
Discovery, characterization, and synthetic potential of two novel bacterial aryl-alcohol oxidases23
Redesign of γ-glutamyl transpeptidase from Bacillus subtilis for high-level production of L-theanine by cavity topology engineering23
Recombinant mannan-binding lectin magnetic beads increase pathogen detection in immunocompromised patients23
Life and death of Pseudokirchneriella subcapitata: physiological changes during chronological aging23
The physicochemical approaches of altering growth and biochemical properties of medicinal plants in saline soils23
Biological cellulose saccharification using a coculture of Clostridium thermocellum and Thermobrachium celere strain A923
Roles of cigar microbes in flavor formation during roasted-rice leachate fermentation23
Mycelial differentiation linked avermectin production in Streptomyces avermitilis studied with Raman imaging23
Aromatic residues in N-terminal domain of archaeal trehalase affect the folding and activity of catalytic domain22
Characterization of the exopolymer-producing Pseudoalteromonas sp. S8-8 from Antarctic sediment22
CRISPR-Cas system: from diagnostic tool to potential antiviral treatment22
Validation of housekeeping genes as internal controls for gene expression studies on biofilm formation in Bacillus velezensis22
Photoheterotroph improved the growth and nutrient levels of Chlorella vulgaris and the related molecular mechanism22
A photobioreactor for production of algae biomass from gaseous emissions of an animal house22
Machine learning: its challenges and opportunities in plant system biology22
Role of AtYap1 in the reactive oxygen species regulation of lovastatin production in Aspergillus terreus22
Phage cocktail alleviated type 2 diabetes by reshaping gut microbiota and decreasing proinflammatory cytokines22
Characterization of an extracellular α-xylosidase involved in xyloglucan degradation in Aspergillus oryzae22
Microbial electrosynthesis of methane and acetate—comparison of pure and mixed cultures22
Helicobacter pylori promotes gastric cancer progression through the tumor microenvironment22
Antimicrobial activity of lipids extracted from Hermetia illucens reared on different substrates21
Rhodotorula sp.–based biorefinery: a source of valuable biomolecules21
Microbial astaxanthin: from bioprocessing to the market recognition21
New derivatives of the iridoid specioside from fungal biotransformation21
Correlation study on microbial communities and volatile flavor compounds in cigar tobacco leaves of diverse origins21
Enhanced selenocysteine biosynthesis for seleno-methylselenocysteine production in Bacillus subtilis21
Application of recombinant TGF-β1 inhibitory peptide to alleviate isoproterenol-induced cardiac fibrosis21
Thermostability engineering of industrial enzymes through structure modification21
Microbial community responses to multiple soil disinfestation change drivers21
Maternal amoxicillin affects piglets colon microbiota: microbial ecology and metabolomics in a gut model21
Canine Mucosal Artificial Colon: development of a new colonic in vitro model adapted to dog sizes21
P26 enhances baculovirus gene delivery by modulating the mammalian antiviral response21
Manganese reductive dissolution coupled to Sb mobilization in contaminated shooting range soil21
Dental plaque microbiota sequence counts for microbial profiling and resistance genes detection21
Establishment of an indirect ELISA for Mycobacterium tuberculosis MTB39A protein antibody21
Enhancing catalytic efficiency of Bacillus subtilis laccase BsCotA through active site pocket design21
Microbial and enzymatic battle with food contaminant zearalenone (ZEN)20
Biosynthesis of animal-free recombinant chondroitin sulfate E using a functional chondroitin sulfotransferase in E. coli20
Enhancing regioselectivity of sucrose phosphorylase by loop engineering for glycosylation of l-ascorbic acid20
Effect of soil bioremediation on soil microbial community structure aimed at controlling tobacco bacterial wilt20
Sodium butyrate supplementation impacts the gastrointestinal bacteria of dairy calves before weaning20
Characterization of a thermotolerant aryl-alcohol oxidase from Moesziomyces antarcticus oxidizing 5-hydroxymethyl-2-furancarboxylic acid20
High molecular/low acetylated chitosans reduce adhesion of Campylobacter jejuni to host cells by blocking JlpA20
The endophytic bacterium Bacillus koreensis 181–22 promotes rice growth and alleviates cadmium stress under cadmium exposure20
PEGylation increases antitumoral activity of arginine deiminase of Streptococcus pyogenes20
Marine dissolved organic matter: a vast and unexplored molecular space20
Effects of compound prebiotics as prophylactic and therapeutic supplementation in a mouse model of acute colitis20
Identifying environmental factors affecting the microbial community composition on outdoor structural timber19
Kinetics and products of Thermotoga maritima β-glucosidase with lactose and cellobiose19
Flavonoids from Sedum aizoon L. inhibit Botrytis cinerea by negatively affecting cell membrane lipid metabolism19
Acyl carrier protein tag can enhance tobacco etch virus protease stability and promote its covalent immobilisation19
Membrane fatty acid desaturase: biosynthesis, mechanism, and architecture19
A novel double antibody sandwich quantitative ELISA for detecting porcine epidemic diarrhea virus infection19
Enhancing the imidase activity of BpIH toward 3-isobutyl glutarimide via semi-rational design19
High fat diet–induced hyperlipidemia and tissue steatosis in rabbits through modulating ileal microbiota19
Development of thermostable sucrose phosphorylase by semi-rational design for efficient biosynthesis of alpha-D-glucosylglycerol19
Metagenomics analysis reveals differences in rumen microbiota in cows with low and high milk protein percentage19
A new function of a putative UDP-glucose 4-epimerase on the expression of glycoside hydrolase genes in Aspergillus aculeatus19
New insights into microbial interactions and putative competitive mechanisms during the hydrogen production from tequila vinasses19
Characterization and immunological effect of outer membrane vesicles from Pasteurella multocida on macrophages19
Developing a separation system to enable real-time recovery of acetone-butanol during fermentation19
Transcriptomic profiling of nitrogen fixation and the role of NifA in Methylomicrobium buryatense 5GB119
Characterization of a novel tetravalent botulism antitoxin based on receptor-binding domain of BoNTs19
The reliance of glycerol utilization by Cupriavidus necator on CO2 fixation and improved glycerol catabolism19
Restoration of cefixime-induced gut microbiota changes by a prebiotic blend in a mouse model19
Digital PCR: a tool in clostridial mutant selection and detection18
Real-time metabolic heat-based specific growth rate soft sensor for monitoring and control of high molecular weight hyaluronic acid production by Streptococcus zooepidemicus18
Recombinant production and characterization of L-glutaminase (glsA) as a promiscuity therapeutic enzyme18
The plant secondary compound swainsonine reshapes gut microbiota in plateau pikas (Ochotona curzoniae)18
A child is not an adult: development of a new in vitro model of the toddler colon18
Alocasia odora–mediated synthesis of silver nanoparticles, their cytotoxicity, and virucidal potential18
Microbial associations for bioremediation. What does “microbial consortia” mean?18
Transcriptomic responses of the fast-growing bacterium Vibrio natriegens during cold-induced loss of culturability18
Discovery and biocatalytic characterization of opine dehydrogenases by metagenome mining18
Oral delivery of a Lactococcus lactis expressing extracellular TGFβR2 alleviates hepatic fibrosis18
DnaJ, a promising vaccine candidate against Ureaplasma urealyticum infection18
Development of high-copy number plasmids in Pseudoalteromonas haloplanktis TAC12518
Colloidal gold and fluorescent immunochromatographic test strips for canine parvovirus detection18
China’s environmental solutions18
Membrane protein Bcsdr2 mediates biofilm integrity, hyphal growth and virulence of Botrytis cinerea18
Gravity sedimentation of eukaryotic algae Euglena gracilis accelerated by ethanol cultivation18
Fabrication of cell plastics composed only of unicellular green alga Chlamydomonas reinhardtii as a raw material18
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