Applied Microbiology and Biotechnology

Papers
(The TQCC of Applied Microbiology and Biotechnology is 14. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-08-01 to 2026-08-01.)
ArticleCitations
Assessing the functional diversity of rhizobacteria from cacao by partitioning root and shoot biomasses259
Impact of Bacillus licheniformis from yaks following antibiotic therapy in mouse model209
Antifungal characterizations of a novel endo-β-1,6-glucanase from Flavobacterium sp. NAU1659203
Development of shuttle vectors for rapid prototyping of engineered Synechococcus sp. PCC7002161
Effects of reducing, stabilizing, and antibiotic agents on “Candidatus Kuenenia stuttgartiensis”147
Basidiomycota strains as whole-cell biocatalysts for the synthesis of high-value natural benzaldehydes119
Chimeric lipoproteins for leptospirosis vaccine: immunogenicity and protective potential105
Identification of Burkholderia cenocepacia non-coding RNAs expressed during Caenorhabditis elegans infection92
Development of efficient 5-ketogluconate production system by Gluconobacter japonicus91
Biovalorisation of agro-industrial wastes into astaxanthin by Xanthophyllomyces dendrorhous86
The serine/threonine protein kinase MpSTE1 directly governs hyphal branching in Monascus spp.80
Rare earth contamination of edible vegetation: Ce, La, and summed REE in fungi74
Biotechnological and endophytic-mediated production of centellosides in Centella asiatica73
Microbial elimination of carbamate pesticides: specific strains and promising enzymes70
Mechanisms of microbial co-aggregation in mixed anaerobic cultures68
Adaptive evolution of Salmonella Typhimurium LT2 exposed to carvacrol lacks a uniform pattern67
Heterologous expressing melittin in a probiotic yeast to evaluate its function for promoting NSC-34 regeneration67
Mushroom β-glucans: application and innovation for food industry and immunotherapy66
Synergistic corrosion effects of magnetite and microorganisms: microbial community dependency65
Quorum quenching effect of cyclodextrins on the pyocyanin and pyoverdine production of Pseudomonas aeruginosa65
Gibberellic acid overproduction in Fusarium fujikuroi using regulatory modification and transcription analysis60
The many functions of carbohydrate-active enzymes in family GH65: diversity and application57
Mycorrhizal symbiosis and the nitrogen nutrition of forest trees56
Optimization and cholesterol-lowering activity of exopolysaccharide from Lactiplantibacillus paraplantarum NCCP 96255
Biodegradation of polyurethane by the microbial consortia enriched from landfill54
Postbiotic-based recombinant receptor activator of NF-κB ligand enhanced oral vaccine efficiency in chicken54
Effects of rice-prawn (Macrobrachium nipponense) co-culture on the microbial community of soil53
Physiological benefits of Akkermansia muciniphila under high-altitude hypoxia53
New emerging materials with potential antibacterial activities53
Synthesis of polymeric nanoparticles by double emulsion and pH-driven: encapsulation of antibiotics and natural products for combating Escherichia coli infections52
Unveiling the importance of the C-terminus in the sugar acid dehydratase of the IlvD/EDD superfamily51
Sensing chemical-induced DNA damage using CRISPR/Cas9-mediated gene-deletion yeast-reporter strains51
Silver nanoparticle effect on Salmonella enterica isolated from Northern West Egypt food, poultry, and calves50
Using dielectrophoretic spectra to identify and separate viable yeast cells49
Enzymatic upcycling of wild-simulated ginseng leaves for enhancing biological activities and compound K49
Photosynthetic performance of Chlamydopodium (Chlorophyta) cultures grown in outdoor bioreactors48
Multiple amplification-based fluorometric aptasensor for highly sensitive detection of Staphylococcus aureus46
Beauveria bassiana transcriptomics reveal virulence-associated shifts during insect lipid assimilation45
Bifunctional peptides as alternatives to copper-based formulations to control citrus canker45
Development of multiplex allele-specific RT-qPCR assays for differentiation of SARS-CoV-2 Omicron subvariants45
Induction and metabolomic analysis of hairy roots of Atractylodes lancea44
Novel yeast-based biosensor for environmental monitoring of tebuconazole43
Degradation mechanism of difructose dianhydride III in Blautia species43
Unraveling endophytic diversity in dioecious Siraitia grosvenorii: implications for mogroside production43
Green synthesized Ag nanoparticles stimulate gene expression and paclitaxel production in Corylus avellana cells42
A novel dual-epigenetic inhibitor enhances recombinant monoclonal antibody expression in CHO cells42
Ferritin from Mycobacterium abscessus is involved in resistance to antibiotics and oxidative stress41
Environmental modulation of exopolysaccharide production in the cyanobacterium Synechocystis 680341
Intestinal microbial community well explain larval growth than feed types41
Functions and substrate selectivity of diacylglycerol acyltransferases from Mortierella alpina40
Polyethylenimine linked with chitosan improves astaxanthin production in Haematococcus pluvialis40
Brij-58 supplementation enhances menaquinone-7 biosynthesis and secretion in Bacillus natto40
An enhanced activity and thermostability of chimeric Bst DNA polymerase for isothermal amplification applications39
Analysis of substrate specificity of cytochrome P450 monooxygenases involved in trichothecene toxin biosynthesis39
Temporal variations of bacterial and eukaryotic community in coastal waters—implications for aquaculture39
Alteration of oral bacteriome of smokeless tobacco users and their association with oral cancer39
Clustered surface amino acid residues modulate the acid stability of GH10 xylanase in fungi38
Tailor-made solvents for microbial carotenoids recovery38
Enhanced chlorobenzene removal by internal magnetic field through initial cell adhesion and biofilm formation38
Improved recombinant expression of soluble cathepsin B and L in Escherichia coli38
Updated component analysis method for naturally occurring sophorolipids from Starmerella bombicola38
New temperature-switchable acyl homoserine lactone-regulated expression vector38
Effect of micro-aeration on syntrophic and methanogenic activity in anaerobic sludge38
Biosensing systems for the detection and quantification of methane gas37
Identification of a plastic-degrading enzyme from Cryptococcus nemorosus and its use in self-degradable plastics37
Research progress and application of enzymatic synthesis of glycosyl compounds37
Identification of traits to improve co-assimilation of glucose and xylose by adaptive evolution of Spathaspora passalidarum and Scheffersomyces stipitis yeasts37
Unveiling the repressive mechanism of a PPS-like regulator (PspR) in polyhydroxyalkanoates biosynthesis network37
Development and evaluation of rapid and accurate one-tube RPA-CRISPR-Cas12b-based detection of mcr-1 and tet(X4)36
Metabolic engineering of Shewanella oneidensis to produce glutamate and itaconic acid36
Genetic analysis of acyl-CoA carboxylases involved in lipid accumulation in Rhodococcus jostii RHA136
Pseudomonadota in the oral cavity: a glimpse into the environment-human nexus36
Genomics analysis of KPC-2 and NDM-5-producing Enterobacteriaceae in migratory birds from Qinghai Lake, China35
Fungal communities are more sensitive to mildew than bacterial communities during tobacco storage processes35
Bacteriophage cocktail for biocontrol of soft rot disease caused by Pectobacterium species in Chinese cabbage35
DNA extraction leads to bias in bacterial quantification by qPCR34
LL-37_Renalexin hybrid peptide exhibits antimicrobial activity at lower MICs than its counterpart single peptides34
A new blocking ELISA for detection of foot-and-mouth disease non-structural protein (NSP) antibodies in a broad host range34
Prevalence of Escherichia coli in electrogenic biofilm on activated carbon in microbial fuel cell34
Is heterogeneity in large-scale bioreactors a real problem in recombinant protein synthesis by Pichia pastoris?33
Enhancing the productivity and proliferation of CHO-K1 cells by oncoprotein YAP (Yes-associated protein)33
Elimination of editing plasmid mediated by theophylline riboswitch in Zymomonas mobilis33
Properties and biotechnological applications of microbial deacetylase33
Understanding the Streptomyces albulus response to low-pH stress at the interface of physiology and transcriptomics33
Aspergillus oryzae PrtR alters transcription of individual peptidase genes in response to the growth environment33
Towards chlorocytes for therapeutic intravascular photosynthesis32
Functional and structural analysis of a cyclization domain in a cyclic β-1,2-glucan synthase32
Gn protein expressed in plants for diagnosis of severe fever with thrombocytopenia syndrome virus32
Enhancing Escherichia coli abiotic stress resistance through ornithine lipid formation32
Distinct roles of carbohydrate-binding modules in multidomain β-1,3–1,4-glucanase on polysaccharide degradation32
Reconstitution of (1→3)-β-D-glucans measurement system using recombinant Limulus polyphemus Factor G32
Poly-β-hydroxybutyrate production by Synechocystis MT_a24 in a raceway pond using urban wastewater32
Yeast cell vacuum infusion into fungal pellets as a novel cell encapsulation methodology32
Correction to: Strategy for the design of a bioreactor for L-lysine immobilized fermentation using Corynebacterium glutamicun32
Monkeypox virus A29L protein as the target for specific diagnosis and serological analysis32
Roles of pH and phosphate in rare earth element biosorption with living acidophilic microalgae31
Correction to: Thermostability engineering of industrial enzymes through structure modification31
Rapid growth of antimicrobial resistance: the role of agriculture in the problem and the solutions31
Drug repositioning: doxazosin attenuates the virulence factors and biofilm formation in Gram-negative bacteria31
A study on the association between gut microbiota, inflammation, and type 2 diabetes31
Key insights into secondary metabolites from various Chaetomium species31
Genetic structure and population diversity of Phytophthora infestans strains in Pacific western Canada31
Textiles as fomites in the healthcare system30
Aromatic residues in N-terminal domain of archaeal trehalase affect the folding and activity of catalytic domain29
Photoheterotroph improved the growth and nutrient levels of Chlorella vulgaris and the related molecular mechanism29
Dynamics and regulatory role of circRNAs in Asian honey bee larvae following fungal infection29
Characterization of the exopolymer-producing Pseudoalteromonas sp. S8-8 from Antarctic sediment28
A photobioreactor for production of algae biomass from gaseous emissions of an animal house28
Rerouting phytosterol degradation pathway for directed androst-1,4-diene-3,17-dione microbial bioconversion28
Correction to: Production and applications of fluorobody from redox-engineered Escherichia coli28
Impact of organic solvents on the catalytic performance of halohydrin dehalogenase28
Rapamycin enhanced the production of 2-phenylethanol during whole-cell bioconversion by yeast28
Nitrogen balance and supply in Australasian mushroom composts28
Dental plaque microbiota sequence counts for microbial profiling and resistance genes detection27
Combinatorial metabolic engineering enables high yield production of α-arbutin from sucrose by biocatalysis27
Application of recombinant TGF-β1 inhibitory peptide to alleviate isoproterenol-induced cardiac fibrosis27
Recombinant mannan-binding lectin magnetic beads increase pathogen detection in immunocompromised patients27
Community composition of phytopathogenic fungi significantly influences ectomycorrhizal fungal communities during subtropical forest succession27
Manganese reductive dissolution coupled to Sb mobilization in contaminated shooting range soil27
Mycelial differentiation linked avermectin production in Streptomyces avermitilis studied with Raman imaging27
Role of AtYap1 in the reactive oxygen species regulation of lovastatin production in Aspergillus terreus27
Enhancement of anti-tumor activity in melanoma using arginine deiminase fused with 30Kc19α protein26
Discovery, characterization, and synthetic potential of two novel bacterial aryl-alcohol oxidases26
Biotechnological applications of biofilms formed by osmotolerant and halotolerant yeasts26
Rhodotorula sp.–based biorefinery: a source of valuable biomolecules26
Redesign of γ-glutamyl transpeptidase from Bacillus subtilis for high-level production of L-theanine by cavity topology engineering26
Microbial astaxanthin: from bioprocessing to the market recognition26
Black yeasts in hypersaline conditions26
Life and death of Pseudokirchneriella subcapitata: physiological changes during chronological aging25
Random mutagenesis and disulfide bond formation improved thermostability in microbial transglutaminase25
Characterization of a novel tetravalent botulism antitoxin based on receptor-binding domain of BoNTs25
Sodium butyrate supplementation impacts the gastrointestinal bacteria of dairy calves before weaning25
Fungal carboxylate transporters: recent manipulations and applications25
Phage cocktail alleviated type 2 diabetes by reshaping gut microbiota and decreasing proinflammatory cytokines25
Canine Mucosal Artificial Colon: development of a new colonic in vitro model adapted to dog sizes25
CRISPR-Cas system: from diagnostic tool to potential antiviral treatment25
Roles of cigar microbes in flavor formation during roasted-rice leachate fermentation25
Flavonoids from Sedum aizoon L. inhibit Botrytis cinerea by negatively affecting cell membrane lipid metabolism25
Effects of compound prebiotics as prophylactic and therapeutic supplementation in a mouse model of acute colitis25
Acyl carrier protein tag can enhance tobacco etch virus protease stability and promote its covalent immobilisation24
P26 enhances baculovirus gene delivery by modulating the mammalian antiviral response24
Kinetics and products of Thermotoga maritima β-glucosidase with lactose and cellobiose24
Enhanced selenocysteine biosynthesis for seleno-methylselenocysteine production in Bacillus subtilis24
Enhancing the imidase activity of BpIH toward 3-isobutyl glutarimide via semi-rational design24
Developing a separation system to enable real-time recovery of acetone-butanol during fermentation24
Membrane fatty acid desaturase: biosynthesis, mechanism, and architecture24
Biosynthesis of animal-free recombinant chondroitin sulfate E using a functional chondroitin sulfotransferase in E. coli24
Identifying environmental factors affecting the microbial community composition on outdoor structural timber24
A new function of a putative UDP-glucose 4-epimerase on the expression of glycoside hydrolase genes in Aspergillus aculeatus24
High molecular/low acetylated chitosans reduce adhesion of Campylobacter jejuni to host cells by blocking JlpA23
New insights into microbial interactions and putative competitive mechanisms during the hydrogen production from tequila vinasses23
Antimicrobial activity of lipids extracted from Hermetia illucens reared on different substrates23
Enhancing catalytic efficiency of Bacillus subtilis laccase BsCotA through active site pocket design23
High fat diet–induced hyperlipidemia and tissue steatosis in rabbits through modulating ileal microbiota23
Effect of soil bioremediation on soil microbial community structure aimed at controlling tobacco bacterial wilt23
Maternal amoxicillin affects piglets colon microbiota: microbial ecology and metabolomics in a gut model23
Halophilic archaea as tools for bioremediation technologies23
Metagenomics analysis reveals differences in rumen microbiota in cows with low and high milk protein percentage23
A novel double antibody sandwich quantitative ELISA for detecting porcine epidemic diarrhea virus infection23
Characterization and immunological effect of outer membrane vesicles from Pasteurella multocida on macrophages23
Colloidal gold and fluorescent immunochromatographic test strips for canine parvovirus detection23
Establishment of an indirect ELISA for Mycobacterium tuberculosis MTB39A protein antibody23
Development of high-copy number plasmids in Pseudoalteromonas haloplanktis TAC12522
Correlation study on microbial communities and volatile flavor compounds in cigar tobacco leaves of diverse origins22
Non-growth inhibitory doses of dimethyl sulfoxide alter gene expression and epigenetic pattern of bacteria22
Engineering D-glucose utilization in Azospirillum brasilense Sp7 promotes rice root colonization22
Optimization of welan gum extraction and purification using lysozyme and alkaline protease22
Digital PCR: a tool in clostridial mutant selection and detection22
Gravity sedimentation of eukaryotic algae Euglena gracilis accelerated by ethanol cultivation22
The alteration of intestinal mucosal α-synuclein expression and mucosal microbiota in Parkinson’s disease22
Pathway crosstalk between the central metabolic and heme biosynthetic pathways in Phanerochaete chrysosporium22
Comparison of iSeq and MiSeq as the two platforms for 16S rRNA sequencing in the study of the gut of rat microbiome22
Transcriptomic responses of the fast-growing bacterium Vibrio natriegens during cold-induced loss of culturability22
A child is not an adult: development of a new in vitro model of the toddler colon22
Transcription factors enhancing synthesis of recombinant proteins and resistance to stress in Yarrowia lipolytica22
Aptamer-based technology for detecting Bacillus subtilis in soil22
Exploring Rhodospirillum rubrum response to high doses of carbon monoxide under light and dark conditions21
A mycofactocin-associated dehydrogenase is essential for ethylene glycol metabolism by Rhodococcus jostii RHA121
DnaJ, a promising vaccine candidate against Ureaplasma urealyticum infection21
A novel Saclayvirus Acinetobacter baumannii phage genomic analysis and effectiveness in preventing pneumonia21
Bacterial cellulose production by Novacetimonas hansenii MSCL 1646 on apple juice21
Biotechnological approaches for suppressing Microcystis blooms: insights and challenges21
Membrane protein Bcsdr2 mediates biofilm integrity, hyphal growth and virulence of Botrytis cinerea21
Alocasia odora–mediated synthesis of silver nanoparticles, their cytotoxicity, and virucidal potential21
β-oxidation–polyhydroxyalkanoates synthesis relationship in Pseudomonas putida KT2440 revisited21
Arabinan hydrolysis by GH43 enzymes of Hungateiclostridium clariflavum and the potential synergistic mechanisms21
Pharmacokinetics and pharmacodynamics of antibacterial peptide NZX in Staphylococcus aureus mastitis mouse model21
Development and evaluation of a blocking ELISA for serological diagnosis of equine infectious anemia21
Production of recombinant vesicular stomatitis virus-based vectors by tangential flow depth filtration21
Antimicrobial resistance: new insights and therapeutic implications21
China’s environmental solutions21
Parity changed fecal microbiota of sows and its correlation with milk long-chain fatty acid profiles20
Characterization of an efficient CRISPR-iCas9 system in Yarrowia lipolytica for the biosynthesis of carotenoids20
Fusarium verticillioides Pex7/20 mediates peroxisomal PTS2 pathway import, pathogenicity, and fumonisin B1 biosynthesis20
Production, characterization, and application of phage-derived PK34 recombinant anti-microbial peptide20
Correction: Comprehensive metagenomic analysis of stress‑resistant and‑sensitive Listeria monocytogenes20
Discovery and biocatalytic characterization of opine dehydrogenases by metagenome mining20
Vertical distribution of Candidatus Methylomirabilis and Methanoperedens in agricultural soils20
Conversion of polyploid and alloploid Saccharomyces sensu stricto strains to leu2 mutants by genome DNA editing20
Bdellovibrio’s prey-independent lifestyle is fueled by amino acids as a carbon source20
Mulches assist degraded soil recovery via stimulating biogeochemical cycling: metagenomic analysis20
Novel reaction systems for catalytic synthesis of structured phospholipids20
Strategies for variable regulation of methanogenesis efficiency and velocity20
Comprehensive insights into the metabolism characteristics of small RNA Qrr4 in Vibrio alginolyticus20
Cleavage of cell junction proteins as a host invasion strategy in leptospirosis20
Development of robust, indigenous ELISA for detection of IgG antibodies against CoV-2 N and S proteins: mass screening20
The potential role of plant secondary metabolites on antifungal and immunomodulatory effect20
The application of bacteria-derived dehydrogenases and oxidases in the synthesis of gold nanoparticles20
Oral microbiota in preschoolers with rampant caries: a matched case–control study20
Distinction of chia varieties in vivo and in vitro based on the flow cytometry and rosmarinic acid production20
Biopolymer-based emulsions for the stabilization of Trichoderma atrobrunneum conidia for biological control20
Combining high pressure and electric fields towards Nannochloropsis oculata eicosapentaenoic acid-rich extracts20
Recombinant T7 RNA polymerase production using ClearColi BL21(DE3) and animal-free media for in vitro transcription20
Biological control of soft rot in potato by κ-carrageenan carriers encapsulated microbial predators20
Electrochemical biosensor detection on respiratory and flaviviruses20
Targeting of phagolysosomes containing conidia of the fungus Aspergillus fumigatus with polymeric particles20
Characterisation of cytotoxicity and immunomodulatory effects of glycolipid biosurfactants on human keratinocytes20
Occurrence and dissemination of antibiotic resistance genes in mine soil ecosystems20
Preparation and application of fluorescent monoclonal antibodies recognizing goat CD4+CD25+ regulatory T cells20
Engineering the Tat-secretion pathway of Bacillus licheniformis for the secretion of cytoplasmic enzyme arginase19
Cephalosporin C biosynthesis and fermentation in Acremonium chrysogenum19
New two-stage pH combined with dissolved oxygen control strategy for cyclic β-1,2 glucans synthesis19
Disruption of SMC-related genes promotes recombinant cholesterol esterase production in Burkholderia stabilis19
Aspergillus fumigatus escape mechanisms from its harsh survival environments19
Bacterial cellulose production by a strain of Komagataeibacter rhaeticus isolated from residual loquat19
Research progress on carotenoid production by Rhodosporidium toruloides19
Influence of combined abiotic/biotic factors on decay of P. aeruginosa and E. coli in Rhine River water19
Structural diversification of vitamin D using microbial biotransformations19
Enhanced production of aspochalasin D through genetic engineering of Aspergillus flavipes19
Impact of osmotic stress on production, morphology, and fitness of Beauveria bassiana blastospores19
Enhancing surfactin production in B. velezensis Bs916 combined cumulative mutagenesis and expression key enzymes19
Acid-tolerant bacteria and prospects in industrial and environmental applications19
Application of MALDI-TOF MS for enumerating bacterial constituents of defined consortia19
Combined transcriptomic and pangenomic analyses guide metabolic amelioration to enhance tiancimycins production19
Cation affinity purification of histidine-tagged proteins18
Identification and characterization of a new HNH restriction endonuclease with unusual properties18
Light-driven biodegradation of azo dyes by Shewanella decolorationis-CdS biohybrid in wastewater lacking electron donors18
A serum NMR metabolomic analysis of the Corynebacterium pseudotuberculosis infection in goats18
Characterizing sediment functional traits and ecological consequences respond to increasing antibiotic pollution18
G-quadruplex motifs in Neisseria gonorrhoeae as anti-gonococcal targets18
Characterization of bifunctional alginate lyase Aly644 and antimicrobial activity of enzymatic hydrolysates18
Estimating the bias related to DNA recovery from hemp stems for retting microbial community investigation18
Mining an O-methyltransferase for de novo biosynthesis of physcion in Aspergillus nidulans18
Development and evaluation of a test strip for the rapid detection of antibody against equine infectious anemia virus18
Beauveria bassiana exhibits strong virulence against Dendroctonus ponderosae in greenhouse and field experiments18
Holistic monitoring of Campylobacter jejuni biofilms with NanoLuc bioluminescence18
A type III polyketide synthase cluster in the phylum Planctomycetota is involved in alkylresorcinol biosynthesis18
Expression of virus-like particles (VLPs) of foot-and-mouth disease virus (FMDV) using Saccharomyces cerevisiae18
Genetic control of rhizosphere microbiome of the cotton plants under field conditions18
High-yield BMP2 expression in rice cells via CRISPR and endogenous αAmy3 promoter18
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