Applied Microbiology and Biotechnology

Papers
(The median citation count of Applied Microbiology and Biotechnology is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)
ArticleCitations
Effects of rice-prawn (Macrobrachium nipponense) co-culture on the microbial community of soil230
Antifungal characterizations of a novel endo-β-1,6-glucanase from Flavobacterium sp. NAU1659137
Biovalorisation of agro-industrial wastes into astaxanthin by Xanthophyllomyces dendrorhous136
Induction of glutamic acid production by copper in Corynebacterium glutamicum125
Geographic and position-based variations in phyllospheric bacterial communities present on flue-cured tobacco122
Characterization of a novel broad-spectrum endolysin PlyD4 encoded by a highly conserved prophage found in Aeromonas hydrophila ST251 strains115
Chimeric lipoproteins for leptospirosis vaccine: immunogenicity and protective potential112
Heterologous expressing melittin in a probiotic yeast to evaluate its function for promoting NSC-34 regeneration101
Identification of Burkholderia cenocepacia non-coding RNAs expressed during Caenorhabditis elegans infection100
Development of shuttle vectors for rapid prototyping of engineered Synechococcus sp. PCC700293
Quorum quenching effect of cyclodextrins on the pyocyanin and pyoverdine production of Pseudomonas aeruginosa91
Synthesis of polymeric nanoparticles by double emulsion and pH-driven: encapsulation of antibiotics and natural products for combating Escherichia coli infections81
Postbiotic-based recombinant receptor activator of NF-κB ligand enhanced oral vaccine efficiency in chicken75
Microbial elimination of carbamate pesticides: specific strains and promising enzymes68
Optimisation of xylanases production by two Cellulomonas strains and their use for biomass deconstruction65
The many functions of carbohydrate-active enzymes in family GH65: diversity and application64
Effects of reducing, stabilizing, and antibiotic agents on “Candidatus Kuenenia stuttgartiensis”62
Production of bioactive recombinant human fibroblast growth factor 12 using a new transient expression vector in E. coli and its neuroprotective effects61
Correction to: The starch-binding domain as a tool for recombinant protein purification60
Biotechnological interventions of in vitro propagation and production of valuable secondary metabolites in Stevia rebaudiana58
Correction to: Impacts of elicitors on metabolite production and on antioxidant potential and tyrosinase inhibition in watercress microshoot cultures58
Biotechnology of banana (Musa spp.): multi-dimensional progress and prospect of in vitro–mediated system57
The serine/threonine protein kinase MpSTE1 directly governs hyphal branching in Monascus spp.55
Therapeutic efficacy of new botulinum toxin identified in CCUG 7968 strain55
Assessing the functional diversity of rhizobacteria from cacao by partitioning root and shoot biomasses54
Adaptive evolution of Salmonella Typhimurium LT2 exposed to carvacrol lacks a uniform pattern54
Ultra-high irradiance (UHI) blue light: highlighting the potential of a novel LED-based device for short antifungal treatments of food contact surfaces54
Some novel features of strong promoters discovered in Cytophaga hutchinsonii52
Sequential fungal pretreatment of unsterilized Miscanthus: changes in composition, cellulose digestibility and microbial communities51
Basidiomycota strains as whole-cell biocatalysts for the synthesis of high-value natural benzaldehydes50
Sequential uptake of aldoses over fructose and enhanced phosphate solubilization in Rhizobium sp. RM48
Rare earth contamination of edible vegetation: Ce, La, and summed REE in fungi48
Physiological benefits of Akkermansia muciniphila under high-altitude hypoxia48
New emerging materials with potential antibacterial activities46
Identification of key residues for efficient glucose transport by the hexose transporter CgHxt4 in high sugar fermentation yeast Candida glycerinogenes46
Effects of mokF gene deletion and overexpression on the Monacolin K metabolism yields of Monascus purpureus46
Comparative roles of three adhesin genes (adh1–3) in insect-pathogenic lifecycle of Beauveria bassiana46
Antimicrobial properties of L-amino acid oxidase: biochemical features and biomedical applications46
Dynamic control of the distribution of carbon flux between cell growth and butyrate biosynthesis in Escherichia coli45
Mycorrhizal symbiosis and the nitrogen nutrition of forest trees45
Challenges and perspectives of the β-galactosidase enzyme44
Identification of a protective Bacteroides strain of alcoholic liver disease and its synergistic effect with pectin44
Shifting the distribution: modulation of the lipid profile in Yarrowia lipolytica via iron content44
Gibberellic acid overproduction in Fusarium fujikuroi using regulatory modification and transcription analysis43
Mechanisms of microbial co-aggregation in mixed anaerobic cultures43
Impact of Bacillus licheniformis from yaks following antibiotic therapy in mouse model43
Development of efficient 5-ketogluconate production system by Gluconobacter japonicus42
Conversion of viridicatic acid to crustosic acid by cytochrome P450 enzyme-catalysed hydroxylation and spontaneous cyclisation42
Biodegradation of polyurethane by the microbial consortia enriched from landfill42
Metabolic engineering of Saccharomyces cerevisiae for enhanced production of caffeic acid41
Effect of P availability on straw-induced priming effect was mainly regulated by fungi in croplands41
Factors affecting the isolation and diversity of marine sponge-associated bacteria41
Eukaryotic community composition and dynamics during solid waste decomposition41
Optimization and cholesterol-lowering activity of exopolysaccharide from Lactiplantibacillus paraplantarum NCCP 96240
Mushroom β-glucans: application and innovation for food industry and immunotherapy40
Synergism between metallic nanoparticles and antibiotics40
Aspergillus niger uses the peroxisomal CoA-dependent β-oxidative genes to degrade the hydroxycinnamic acids caffeic acid, ferulic acid, and p-coumaric acid40
Biotechnological and endophytic-mediated production of centellosides in Centella asiatica40
Intestinal microbial community well explain larval growth than feed types39
Synergistic corrosion effects of magnetite and microorganisms: microbial community dependency39
Unveiling the importance of the C-terminus in the sugar acid dehydratase of the IlvD/EDD superfamily39
A method for the analysis of methylmercury and total Hg in fungal matrices38
Ferritin from Mycobacterium abscessus is involved in resistance to antibiotics and oxidative stress38
Development of a competitive ELISA for detecting antibodies against genotype 1 hepatitis E virus37
Engineering anaerobic digestion via optimizing microbial community: effects of bactericidal agents, quorum sensing inhibitors, and inorganic materials37
Research progress and application of enzymatic synthesis of glycosyl compounds37
Elicitation of biomolecules as host defense arsenals during insect attacks on tea plants (Camellia sinensis (L.) Kuntze) 37
New temperature-switchable acyl homoserine lactone-regulated expression vector36
Updated component analysis method for naturally occurring sophorolipids from Starmerella bombicola36
Rescuing humanity by antimicrobial peptides against colistin-resistant bacteria36
Biosensing systems for the detection and quantification of methane gas36
Silver nanoparticle effect on Salmonella enterica isolated from Northern West Egypt food, poultry, and calves36
Identification of traits to improve co-assimilation of glucose and xylose by adaptive evolution of Spathaspora passalidarum and Scheffersomyces stipitis yeasts35
Environmental modulation of exopolysaccharide production in the cyanobacterium Synechocystis 680335
Unraveling endophytic diversity in dioecious Siraitia grosvenorii: implications for mogroside production35
Brij-58 supplementation enhances menaquinone-7 biosynthesis and secretion in Bacillus natto34
Unveiling the repressive mechanism of a PPS-like regulator (PspR) in polyhydroxyalkanoates biosynthesis network34
Co-transfer of plasmid-encoded bla carbapenemases genes and mercury resistance operon in high-risk clones of Klebsiella pneumoniae34
Agri-biotechnology of coriander (Coriandrum sativum L.): an inclusive appraisal34
Evoglow-Pp1 and mCherry proteins: a dual fluorescent labeling system for lactic acid bacteria33
Identification of a plastic-degrading enzyme from Cryptococcus nemorosus and its use in self-degradable plastics33
Genetic analysis of acyl-CoA carboxylases involved in lipid accumulation in Rhodococcus jostii RHA133
Temporal variations of bacterial and eukaryotic community in coastal waters—implications for aquaculture33
Analysis of substrate specificity of cytochrome P450 monooxygenases involved in trichothecene toxin biosynthesis33
Photosynthetic performance of Chlamydopodium (Chlorophyta) cultures grown in outdoor bioreactors33
Functions and substrate selectivity of diacylglycerol acyltransferases from Mortierella alpina33
Polyethylenimine linked with chitosan improves astaxanthin production in Haematococcus pluvialis32
Development and evaluation of rapid and accurate one-tube RPA-CRISPR-Cas12b-based detection of mcr-1 and tet(X4)32
Exploring the molecular content of CHO exosomes during bioprocessing32
Development of multiplex allele-specific RT-qPCR assays for differentiation of SARS-CoV-2 Omicron subvariants32
A large-scale whole-genome sequencing analysis reveals false positives of bacterial essential genes32
Enhancing β-alanine production from glucose in genetically modified Corynebacterium glutamicum by metabolic pathway engineering32
Construction of a novel filamentous fungal protein expression system based on redesigning of regulatory elements32
Transcriptome analysis provides new insights into the tolerance and reduction of Lysinibacillus fusiformis 15–4 to hexavalent chromium32
Bifunctional peptides as alternatives to copper-based formulations to control citrus canker31
Green synthesized Ag nanoparticles stimulate gene expression and paclitaxel production in Corylus avellana cells31
Enhanced chlorobenzene removal by internal magnetic field through initial cell adhesion and biofilm formation31
Metabolic engineering of Shewanella oneidensis to produce glutamate and itaconic acid31
Clustered surface amino acid residues modulate the acid stability of GH10 xylanase in fungi31
Using dielectrophoretic spectra to identify and separate viable yeast cells31
A screened PirB antagonist peptide antagonizes Aβ42-mediated inhibition of neurite outgrowth in vitro30
Multiple amplification-based fluorometric aptasensor for highly sensitive detection of Staphylococcus aureus30
Improved recombinant expression of soluble cathepsin B and L in Escherichia coli30
Enzymatic upcycling of wild-simulated ginseng leaves for enhancing biological activities and compound K30
Unveiling the keratinolytic transcriptome of the black carpet beetle (Attagenus unicolor) for sustainable poultry feather recycling30
A strategic approach to apply bacterial substances for increasing metabolite productions of Euglena gracilis in the bioreactor30
Sensing chemical-induced DNA damage using CRISPR/Cas9-mediated gene-deletion yeast-reporter strains30
Effect of micro-aeration on syntrophic and methanogenic activity in anaerobic sludge30
Novel yeast-based biosensor for environmental monitoring of tebuconazole29
Engineering of the unfolded protein response pathway in Pichia pastoris: enhancing production of secreted recombinant proteins29
Tailor-made solvents for microbial carotenoids recovery29
Induction and metabolomic analysis of hairy roots of Atractylodes lancea29
Degradation mechanism of difructose dianhydride III in Blautia species29
Beauveria bassiana transcriptomics reveal virulence-associated shifts during insect lipid assimilation29
A novel dual-epigenetic inhibitor enhances recombinant monoclonal antibody expression in CHO cells29
Biological activity of oxadiazole and thiadiazole derivatives29
Drug repurposing strategies in the development of potential antifungal agents28
Marine microbial L-glutaminase: from pharmaceutical to food industry28
Reconstruction of the glutamate decarboxylase system in Lactococcus lactis for biosynthesis of food-grade γ-aminobutyric acid28
Distinct roles of carbohydrate-binding modules in multidomain β-1,3–1,4-glucanase on polysaccharide degradation28
Enantioselectivity and key residue of Herbaspirillum huttiense monooxygenase in asymmetric epoxidation of styrenes28
A new blocking ELISA for detection of foot-and-mouth disease non-structural protein (NSP) antibodies in a broad host range28
Enhancement of lysine biosynthesis confers high-temperature stress tolerance to Escherichia coli cells28
Roles of pH and phosphate in rare earth element biosorption with living acidophilic microalgae28
Alteration of oral bacteriome of smokeless tobacco users and their association with oral cancer28
An enhanced activity and thermostability of chimeric Bst DNA polymerase for isothermal amplification applications28
A study on the association between gut microbiota, inflammation, and type 2 diabetes28
Monkeypox virus A29L protein as the target for specific diagnosis and serological analysis28
Is heterogeneity in large-scale bioreactors a real problem in recombinant protein synthesis by Pichia pastoris?27
Pseudomonadota in the oral cavity: a glimpse into the environment-human nexus27
Properties and biotechnological applications of microbial deacetylase27
Genomics analysis of KPC-2 and NDM-5-producing Enterobacteriaceae in migratory birds from Qinghai Lake, China27
Biotechnological production of bacosides from cell and organ cultures of Bacopa monnieri27
Textiles as fomites in the healthcare system27
Rapid growth of antimicrobial resistance: the role of agriculture in the problem and the solutions26
Understanding the Streptomyces albulus response to low-pH stress at the interface of physiology and transcriptomics26
Stochastic processes shape the bacterial community assembly in shrimp cultural pond sediments26
Relevance of Candidatus Nitrotoga for nitrite oxidation in technical nitrogen removal systems26
Biodegradation of metoprolol in oxic and anoxic hyporheic zone sediments: unexpected effects on microbial communities26
Poly-β-hydroxybutyrate production by Synechocystis MT_a24 in a raceway pond using urban wastewater26
Autotrophic lactate production from H2 + CO2 using recombinant and fluorescent FAST-tagged Acetobacterium woodii strains26
Yeast cell vacuum infusion into fungal pellets as a novel cell encapsulation methodology26
Microbial ecology of biofiltration used for producing safe drinking water26
Correction to: Strategy for the design of a bioreactor for L-lysine immobilized fermentation using Corynebacterium glutamicun26
DNA extraction leads to bias in bacterial quantification by qPCR25
Yarrowia lipolytica, health benefits for animals25
Towards chlorocytes for therapeutic intravascular photosynthesis25
Gn protein expressed in plants for diagnosis of severe fever with thrombocytopenia syndrome virus25
Correction to: Thermostability engineering of industrial enzymes through structure modification25
Elimination of editing plasmid mediated by theophylline riboswitch in Zymomonas mobilis25
Genetic structure and population diversity of Phytophthora infestans strains in Pacific western Canada25
Enhancing the productivity and proliferation of CHO-K1 cells by oncoprotein YAP (Yes-associated protein)25
Prevalence of Escherichia coli in electrogenic biofilm on activated carbon in microbial fuel cell25
Carboxylesterases for the hydrolysis of acetoacetate esters and their applications in terpenoid production using Escherichia coli25
Dynamics and regulatory role of circRNAs in Asian honey bee larvae following fungal infection25
Drug repositioning: doxazosin attenuates the virulence factors and biofilm formation in Gram-negative bacteria25
Correction to: Production and applications of fluorobody from redox-engineered Escherichia coli24
Mycelial differentiation linked avermectin production in Streptomyces avermitilis studied with Raman imaging24
Helicobacter pylori promotes gastric cancer progression through the tumor microenvironment24
LL-37_Renalexin hybrid peptide exhibits antimicrobial activity at lower MICs than its counterpart single peptides24
Use of red, far-red, and near-infrared light in imaging of yeasts and filamentous fungi24
Reconstitution of (1→3)-β-D-glucans measurement system using recombinant Limulus polyphemus Factor G24
A photobioreactor for production of algae biomass from gaseous emissions of an animal house24
Random mutagenesis and disulfide bond formation improved thermostability in microbial transglutaminase24
Recombinant mannan-binding lectin magnetic beads increase pathogen detection in immunocompromised patients24
Fungal communities are more sensitive to mildew than bacterial communities during tobacco storage processes24
Functional and structural analysis of a cyclization domain in a cyclic β-1,2-glucan synthase24
Aspergillus oryzae PrtR alters transcription of individual peptidase genes in response to the growth environment24
Aromatic residues in N-terminal domain of archaeal trehalase affect the folding and activity of catalytic domain24
Role of AtYap1 in the reactive oxygen species regulation of lovastatin production in Aspergillus terreus24
Correction to: The limiting factors of oncolytic virus immunotherapy and the approaches to overcome them24
Key insights into secondary metabolites from various Chaetomium species24
Bacteriophage cocktail for biocontrol of soft rot disease caused by Pectobacterium species in Chinese cabbage24
Enhancing Escherichia coli abiotic stress resistance through ornithine lipid formation24
A comprehensive method for determining cellular uptake of purine nucleoside phosphorylase and adenylosuccinate synthetase inhibitors by H. pylori23
Dental plaque microbiota sequence counts for microbial profiling and resistance genes detection23
Photoheterotroph improved the growth and nutrient levels of Chlorella vulgaris and the related molecular mechanism23
Biological cellulose saccharification using a coculture of Clostridium thermocellum and Thermobrachium celere strain A923
Characterization of the exopolymer-producing Pseudoalteromonas sp. S8-8 from Antarctic sediment23
Black yeasts in hypersaline conditions23
Redesign of γ-glutamyl transpeptidase from Bacillus subtilis for high-level production of L-theanine by cavity topology engineering23
Biotechnological applications of biofilms formed by osmotolerant and halotolerant yeasts23
Application of recombinant TGF-β1 inhibitory peptide to alleviate isoproterenol-induced cardiac fibrosis23
Impact of organic solvents on the catalytic performance of halohydrin dehalogenase23
60Coγ induction improves the protective effect of Acetobacter pasteurianus against ionizing radiation in mice23
Combinatorial metabolic engineering enables high yield production of α-arbutin from sucrose by biocatalysis23
PTT-quant: a new method for direct identification and absolute quantification of premature transcription termination events, following the example of bacterial riboswitches23
Herbaspirillum seropedicae expresses non-phosphorylative pathways for d-xylose catabolism23
Fungal carboxylate transporters: recent manipulations and applications23
Community composition of phytopathogenic fungi significantly influences ectomycorrhizal fungal communities during subtropical forest succession23
Rapamycin enhanced the production of 2-phenylethanol during whole-cell bioconversion by yeast23
Life and death of Pseudokirchneriella subcapitata: physiological changes during chronological aging23
Biochemical and genetic characterization comparison of four extradiol dioxygenases in Rhizorhabdus wittichii RW123
Exploration and characterization of hypoxia-inducible endogenous promoters in Aspergillus niger22
Enhancement of anti-tumor activity in melanoma using arginine deiminase fused with 30Kc19α protein22
Validation of housekeeping genes as internal controls for gene expression studies on biofilm formation in Bacillus velezensis22
Evolutionary and reverse engineering to increase Saccharomyces cerevisiae tolerance to acetic acid, acidic pH, and high temperature22
Roles of cigar microbes in flavor formation during roasted-rice leachate fermentation22
Performance of QuantaMatrix Microfluidic Agarose Channel system integrated with mycobacteria growth indicator tube liquid culture22
The physicochemical approaches of altering growth and biochemical properties of medicinal plants in saline soils21
Rerouting phytosterol degradation pathway for directed androst-1,4-diene-3,17-dione microbial bioconversion21
Nitrogen source as a modulator of the metabolic activity of Pedobacter lusitanus NL19: a transcriptomic approach21
Phage cocktail alleviated type 2 diabetes by reshaping gut microbiota and decreasing proinflammatory cytokines21
Machine learning: its challenges and opportunities in plant system biology21
Thermostability engineering of industrial enzymes through structure modification21
Nitrogen balance and supply in Australasian mushroom composts21
L-asparaginase production review: bioprocess design and biochemical characteristics21
Characterization of an extracellular α-xylosidase involved in xyloglucan degradation in Aspergillus oryzae21
Microbial electrosynthesis of methane and acetate—comparison of pure and mixed cultures21
Correction to: Biotransformation of bisphenol a analogues by the biphenyl-degrading bacterium Cupriavidus basilensis - a structure-biotransformation relationship21
Manganese reductive dissolution coupled to Sb mobilization in contaminated shooting range soil21
Microbial astaxanthin: from bioprocessing to the market recognition21
Rhodotorula sp.–based biorefinery: a source of valuable biomolecules21
An overview of D-galactose utilization through microbial fermentation and enzyme-catalyzed conversion21
Discovery, characterization, and synthetic potential of two novel bacterial aryl-alcohol oxidases21
Improved live-cell PCR method for detection of organophosphates degrading opd genes and applications21
Establishment of an indirect ELISA for Mycobacterium tuberculosis MTB39A protein antibody20
Characterization and immunological effect of outer membrane vesicles from Pasteurella multocida on macrophages20
CRISPR-Cas system: from diagnostic tool to potential antiviral treatment20
Microbial community responses to multiple soil disinfestation change drivers20
Enhancing the imidase activity of BpIH toward 3-isobutyl glutarimide via semi-rational design20
Canine Mucosal Artificial Colon: development of a new colonic in vitro model adapted to dog sizes20
Restoration of cefixime-induced gut microbiota changes by a prebiotic blend in a mouse model20
Identifying environmental factors affecting the microbial community composition on outdoor structural timber20
Enhanced selenocysteine biosynthesis for seleno-methylselenocysteine production in Bacillus subtilis20
P26 enhances baculovirus gene delivery by modulating the mammalian antiviral response20
Enhancing regioselectivity of sucrose phosphorylase by loop engineering for glycosylation of l-ascorbic acid20
Enhancing catalytic efficiency of Bacillus subtilis laccase BsCotA through active site pocket design20
Metagenomics analysis reveals differences in rumen microbiota in cows with low and high milk protein percentage20
New derivatives of the iridoid specioside from fungal biotransformation20
Characterization of γ-glutamyl cysteine ligases from Limosilactobacillus reuteri producing kokumi-active γ-glutamyl dipeptides19
Bacterial α-diglucoside metabolism: perspectives and potential for biotechnology and biomedicine19
A new function of a putative UDP-glucose 4-epimerase on the expression of glycoside hydrolase genes in Aspergillus aculeatus19
Flavonoids from Sedum aizoon L. inhibit Botrytis cinerea by negatively affecting cell membrane lipid metabolism19
The reliance of glycerol utilization by Cupriavidus necator on CO2 fixation and improved glycerol catabolism19
Characterization of a novel tetravalent botulism antitoxin based on receptor-binding domain of BoNTs19
Microbial associations for bioremediation. What does “microbial consortia” mean?19
Hyphal growth of Penicillium rubens in changing relative humidity19
High fat diet–induced hyperlipidemia and tissue steatosis in rabbits through modulating ileal microbiota19
Maternal amoxicillin affects piglets colon microbiota: microbial ecology and metabolomics in a gut model19
Antimicrobial activity of lipids extracted from Hermetia illucens reared on different substrates19
High molecular/low acetylated chitosans reduce adhesion of Campylobacter jejuni to host cells by blocking JlpA19
Microbial and enzymatic battle with food contaminant zearalenone (ZEN)19
A novel double antibody sandwich quantitative ELISA for detecting porcine epidemic diarrhea virus infection19
Transcriptomic profiling of nitrogen fixation and the role of NifA in Methylomicrobium buryatense 5GB119
Halophilic archaea as tools for bioremediation technologies19
The endophytic bacterium Bacillus koreensis 181–22 promotes rice growth and alleviates cadmium stress under cadmium exposure19
Selection of the optimal tyrosine hydroxylation enzyme for (S)-reticuline production in Escherichia coli19
PEGylation increases antitumoral activity of arginine deiminase of Streptococcus pyogenes19
Marine dissolved organic matter: a vast and unexplored molecular space19
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