OOIR: Observatory of International Research

Papers

(The TQCC of European Biophysics Journal With Biophysics Letters is 4. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-08-01 to 2026-08-01.)

Article	Citations
Biophysical characterization of the DNA binding motif of human phospholipid scramblase 1	148
Structure of a novel form of phosphopantetheine adenylyltransferase from Klebsiella pneumoniae at 2.59 Å resolution	32
Long-term memory in Staphylococcus aureus α-hemolysin ion channel kinetics	31
Mechanistic insights of neuronal calcium and IP3 signaling system regulating ATP release during ischemia in progression of Alzheimer’s disease	30
Real-time tilting and twisting motions of ligand-bound states of α7 nicotinic acetylcholine receptor	27
Characterization of Aquaporin Z proteoliposome structure and functionality via microscopy and scattering methods	26
Fluorescent bionanosensor for picomolar detection of biomarkers in fluids	23
Weak protein–bicelle binding quantification via surface-based DNA nanolevers	16
Use of cesium chloride density gradient ultracentrifugation for the purification and characterization of recombinant adeno-associated virus	14
Interaction of Pf4 tactoids with bacteria and synthetic colloidal rods	13
Choosing the right density for a concentrated protein system like gluten in a coarse-grained model	13
European Biophysics Journal - Special Issue Celebrating the 70th Anniversary of the Institute of Biophysics, Czech Academy of Sciences	13
Evidence from computational infrared spectroscopy against vibrational detection of propionate by human olfactory receptor OR51E2	13
A gene-encoded bioprotein second harmonic generation (SHG) probe from Autographa californica nuclear polyhedrosis virus (AcMNPV) polyhedrin for live cell imaging	12
Biophysical insights into plasmid DNA binding by deinococcus grandis Dps nanocage	11
A historical overview of the need for distinction between the attainment of thermodynamic equilibrium and a kinetic steady state in experimental studies	11
Statistical mechanics of soft collagenous tissues: a constitutive model with damage for cerebral bridging veins	10
Indenting multicellular spheroids with various tip geometries	10
Cysteine-mediated structural stabilization of the tetrameric GlpF	9
From survival of irradiated mice to modern molecular insights: a seventy-year journey in radiobiology at the institute of biophysics, Czech academy of sciences	9
Modeling study of kinesin-13 MCAK microtubule depolymerase	9
Molecular transport through nano-sized multipores of lipid vesicles: a COMSOL simulation study	8
Microfluidics for protein interaction studies: current methods, challenges, and future perspectives	8
Assessment of protein incorporation into SBA-15 particles and their structural changes	8
Numerical solution of compartment-based reaction/diffusion models with DABOSS algorithm	8

Pulling short DNA with mismatch base pairs	8
Computational discovery of dual potential inhibitors of SARS‐CoV‐2 spike/ACE2 and Mpro: 3D-pharmacophore, docking-based virtual screening, quantum mechanics and molecular dynamics	8
Analysis of residue–residue interactions in the structures of ASIC1a suggests possible gating mechanisms	8
Achieving femtomolar affinities in structure-based drug design	8
Electron currents mediated by tonoplast cytochromes b561	7
Optimizing electroporation via pulse modulation: a molecular dynamics study	7
Quadruplexes with a grain of salt: influence of cation type and concentration on DNA G4 stability	7
Analysis of proteins in the light of mutations	7
SViMULATE: a computer program facilitating interactive, multi-mode simulation of analytical ultracentrifugation data	7
The effect of ionic redistributions on the microwave dielectric response of cytosol water upon glucose uptake	6
Mechanical anisotropy of hair affected by genetic diseases highlights structural information related to differential crosslinking in keratins	6
Structural evidence of thioacetate reduction by fluorescent protein mRuby	6
Experimental extraction of Young’s modulus of MCF-7 tissue using atomic force microscopy and the spherical contact models	6
Time-dependent simulation of blood flow through an abdominal aorta with iliac arteries	6
Modulation of conformational features and oligomerization of MMACHC by cobalamin variants: impact of the R161Q mutation in cblC disease	6
Measuring bacterial oxygen consumption rate to probe metabolic signature and antimicrobial susceptibility	6
Proceedings of the 26th International Analytical Ultracentrifugation Workshop and Symposium	6
14th EBSA congress, July 31 – August 4, 2023, Stockholm, Sweden – Abstracts	6
Standardization of cross-site biophysical studies of bovine insulin amyloids is challenged by structural polymorphism	5
Sedimentation velocity analytical ultracentrifugation (SV-AUC) for adeno-associated virus characterization: impact of cell alignment	5
DNA methylation enhances cooperative disentanglement by the Hfq nucleoid-associated protein	5
Quenching of G4-DNA intrinsic fluorescence by ligands	5
Rational design of stapled helical peptides as antidiabetic PPARγ antagonists to target coactivator site by decreasing unfavorable entropy penalty instead of increasing favorable enthalpy contribution	5
The effects of lithium on human red blood cells studied using optical spectroscopy and laser trap	5
Thermodynamic and kinetic considerations in DNA triplex formation revealed by ITC	5
Erythrocytes membrane fluidity changes induced by adenylyl cyclase cascade activation: study using fluorescence recovery after photobleaching	5
Diversity of hydrodynamic radii of intrinsically disordered proteins	5
DNA binding to small anionic ligands: the case of Orange G dye	4
The cross-correlation-based analysis to digest the conformational dynamics of the mitoBK channels in terms of their modulation by flavonoids	4
On the utility of microfluidic systems to study protein interactions: advantages, challenges, and applications	4
Clinical use of electrodermal activity and current developments	4
A comparative characterisation of commercially available lipid-polymer nanoparticles formed from model membranes	4
Reciprocal effect on lateral diffusion of receptor for advanced glycation endproducts and toll-like receptor 4 in the HEK293 cell membrane	4
Structure and dynamics of pteridine reductase 1: the key phenomena relevant to enzyme function and drug design	4
Design of inhibitor peptide sequences based on the interfacial knowledge of the protein G-IgG crystallographic complex and their binding studies with IgG	4
The sleeping bacterium: shedding light on the resuscitation mechanism	4
Relation between flexibility and intrinsically disorder regions in thermosensitive TRP channels reveal allosteric effects	4
Structural and functional characterization of Caenorhabditis elegans cyclic GMP-activated channel TAX-4 via molecular dynamics simulations	4
Rethinking the protein folding problem from a new perspective	4
On the possibility of the existence of orienting hydrodynamic steering effects in the kinetics of receptor–ligand association	4
Molecular Biophysics Database (MBDB) makes raw measurements findable and reusable	4