European Biophysics Journal With Biophysics Letters

Article	Citations
Biophysical characterization of the DNA binding motif of human phospholipid scramblase 1	130
Structure of a novel form of phosphopantetheine adenylyltransferase from Klebsiella pneumoniae at 2.59 Å resolution	32
Long-term memory in Staphylococcus aureus α-hemolysin ion channel kinetics	32
Characterization of Aquaporin Z proteoliposome structure and functionality via microscopy and scattering methods	29
Mechanistic insights of neuronal calcium and IP3 signaling system regulating ATP release during ischemia in progression of Alzheimer’s disease	26
Real-time tilting and twisting motions of ligand-bound states of α7 nicotinic acetylcholine receptor	25
Use of cesium chloride density gradient ultracentrifugation for the purification and characterization of recombinant adeno-associated virus	23
Weak protein–bicelle binding quantification via surface-based DNA nanolevers	23
Biophysical insights into plasmid DNA binding by deinococcus grandis Dps nanocage	14
Fluorescent bionanosensor for picomolar detection of biomarkers in fluids	14
A gene-encoded bioprotein second harmonic generation (SHG) probe from Autographa californica nuclear polyhedrosis virus (AcMNPV) polyhedrin for live cell imaging	13
European Biophysics Journal - Special Issue Celebrating the 70th Anniversary of the Institute of Biophysics, Czech Academy of Sciences	13
Evidence from computational infrared spectroscopy against vibrational detection of propionate by human olfactory receptor OR51E2	13
Choosing the right density for a concentrated protein system like gluten in a coarse-grained model	13
Self-assembly of smooth muscle myosin filaments: adaptation of filament length by telokin and Mg·ATP	12
Assessment of protein incorporation into SBA-15 particles and their structural changes	11
From survival of irradiated mice to modern molecular insights: a seventy-year journey in radiobiology at the institute of biophysics, Czech academy of sciences	10
Cysteine-mediated structural stabilization of the tetrameric GlpF	10
Achieving femtomolar affinities in structure-based drug design	9
Statistical mechanics of soft collagenous tissues: a constitutive model with damage for cerebral bridging veins	9
Indenting multicellular spheroids with various tip geometries	9
Molecular transport through nano-sized multipores of lipid vesicles: a COMSOL simulation study	8
Microfluidics for protein interaction studies: current methods, challenges, and future perspectives	8
Modeling study of kinesin-13 MCAK microtubule depolymerase	8
Numerical solution of compartment-based reaction/diffusion models with DABOSS algorithm	8

Modulation of conformational features and oligomerization of MMACHC by cobalamin variants: impact of the R161Q mutation in cblC disease	8
SViMULATE: a computer program facilitating interactive, multi-mode simulation of analytical ultracentrifugation data	8
Analysis of residue–residue interactions in the structures of ASIC1a suggests possible gating mechanisms	8
Pulling short DNA with mismatch base pairs	8
Measuring bacterial oxygen consumption rate to probe metabolic signature and antimicrobial susceptibility	7
Mechanical anisotropy of hair affected by genetic diseases highlights structural information related to differential crosslinking in keratins	7
Proceedings of the 26th International Analytical Ultracentrifugation Workshop and Symposium	7
Quadruplexes with a grain of salt: influence of cation type and concentration on DNA G4 stability	7
Electron currents mediated by tonoplast cytochromes b561	7
The effects of lithium on human red blood cells studied using optical spectroscopy and laser trap	7
14th EBSA congress, July 31 – August 4, 2023, Stockholm, Sweden – Abstracts	7
Computational discovery of dual potential inhibitors of SARS‐CoV‐2 spike/ACE2 and Mpro: 3D-pharmacophore, docking-based virtual screening, quantum mechanics and molecular dynamics	7
Analysis of proteins in the light of mutations	7
The effect of ionic redistributions on the microwave dielectric response of cytosol water upon glucose uptake	7
Optimizing electroporation via pulse modulation: a molecular dynamics study	7
Time-dependent simulation of blood flow through an abdominal aorta with iliac arteries	6
Erythrocytes membrane fluidity changes induced by adenylyl cyclase cascade activation: study using fluorescence recovery after photobleaching	6
Rational design of stapled helical peptides as antidiabetic PPARγ antagonists to target coactivator site by decreasing unfavorable entropy penalty instead of increasing favorable enthalpy contribution	6
Experimental extraction of Young’s modulus of MCF-7 tissue using atomic force microscopy and the spherical contact models	6
Sedimentation velocity analytical ultracentrifugation (SV-AUC) for adeno-associated virus characterization: impact of cell alignment	6
DNA methylation enhances cooperative disentanglement by the Hfq nucleoid-associated protein	6
Diversity of hydrodynamic radii of intrinsically disordered proteins	6
Standardization of cross-site biophysical studies of bovine insulin amyloids is challenged by structural polymorphism	6
Quenching of G4-DNA intrinsic fluorescence by ligands	5
Design of inhibitor peptide sequences based on the interfacial knowledge of the protein G-IgG crystallographic complex and their binding studies with IgG	5
Relation between flexibility and intrinsically disorder regions in thermosensitive TRP channels reveal allosteric effects	5
DNA binding to small anionic ligands: the case of Orange G dye	5
Reciprocal effect on lateral diffusion of receptor for advanced glycation endproducts and toll-like receptor 4 in the HEK293 cell membrane	5
Thermodynamic and kinetic considerations in DNA triplex formation revealed by ITC	5
Structure and dynamics of pteridine reductase 1: the key phenomena relevant to enzyme function and drug design	5
The cross-correlation-based analysis to digest the conformational dynamics of the mitoBK channels in terms of their modulation by flavonoids	5
The sleeping bacterium: shedding light on the resuscitation mechanism	4
A comparative characterisation of commercially available lipid-polymer nanoparticles formed from model membranes	4
On the possibility of the existence of orienting hydrodynamic steering effects in the kinetics of receptor–ligand association	4
Molecular Biophysics Database (MBDB) makes raw measurements findable and reusable	4
Rethinking the protein folding problem from a new perspective	4
Clinical use of electrodermal activity and current developments	4
Professor Emil Paleček: seven decades with electrodes and biomolecules at the Institute of Biophysics of the CAS	4
Structural and functional characterization of Caenorhabditis elegans cyclic GMP-activated channel TAX-4 via molecular dynamics simulations	4
On the utility of microfluidic systems to study protein interactions: advantages, challenges, and applications	4
Crystal structure of 4-amino-5-hydroxymethyl-2-methyl pyrimidine phosphate kinase (HMPP kinase) from Thermus thermophilus HB8	4
Hydrodynamic properties of macromolecules and nanoparticles in dilute solution: a brief essay on classical and modern concepts	4
A new UltraScan module for the characterization and quantification of analytical buoyant density equilibrium experiments to determine AAV capsid loading	3
On-the-fly resolution enhancement in X-ray protein crystallography using electric field	3
Peptide-based pore formation and cell membrane deformation: European Biophysics Journal Prizes at EBSA 2023	3
Flow-induced dispersion analysis for probing cyclodextrin–guest binding interactions	3
Analytical ultracentrifugation as a tool for exploring COSAN assemblies	3
Physical principles underpinning molecular-level protein evolution	3
Acytota and the evolution of complexity	3
AAV analysis by sedimentation velocity analytical ultracentrifugation: beyond empty and full capsids	3

Amyloid fibril length distribution from dynamic light scattering data	3
Revealing the single-channel characteristics of OprD (OccAB1) porins from hospital strains of Acinetobacter baumannii	3
A look into the future	3
Magnetic field based investigation of Brugada syndrome	3
Mammalian Nudt15 hydrolytic and binding activity on methylated guanosine mononucleotides	3
Determination of the size parameters of α-synuclein amyloid precursor forms through DLS analysis	3
Comparative sedimentation equilibrium analysis of two IgG1 glycoforms: IgGCri and IgGWid	3
Molecular dynamics study of collective water vibrations in a DNA hydration shell	3
Exploring the influence of water micro assemblies on protein folding, enzyme catalysis and membrane dynamics	3
The role of heterogeneity of intersubunit interfaces in the outer membrane leaflet in maintaining GABAA receptor activity	3
Systematic noise removal from analytical ultracentrifugation data with UltraScan	3
An obituary: Dr. Helmut Cölfen 1965–2023	3
A paradigm shift: analytical ultracentrifugation as a multi-attribute platform method in targeted protein degradation	3
Twist-stretch relations in nucleic acids	2
A robust fluorescence-based assay for human erythrocyte Ca++ efflux suitable for high-throughput inhibitor screens	2
Structural analysis of the peptides temporin-Ra and temporin-Rb and interactions with model membranes	2
An intramolecular disulphide bond in human 4E-T affects its binding to eIF4E1a protein	2
Ribulose-1,5-bisphosphate carboxylase/oxygenase activase isoforms from diverse species show differences in oligomeric structure, thermal stability, and activity	2
Statistical mechanics of bone damage: a constitutive model	2
Inhibitor design for TMPRSS2: insights from computational analysis of its backbone hydrogen bonds using a simple descriptor	2
Mitochondrial alterations induced by Macrovipera lebetina venom	2
A fit-less approach to the elasticity of the handles in optical tweezers experiments	2
Application of artificial neural network for the mechano-bactericidal effect of bioinspired nanopatterned surfaces	2
Biophysical characterization of polyphenol aggregates in Moringa oleifera leaves water extract: stability and surface exposure effect on antioxidant activity under dilution	2
Determination of mRNA copy number in degradable lipid nanoparticles via density contrast analytical ultracentrifugation	2
Simulation of intracellular delivery through permeabilized multivesicular vesicles	2
On the role of calcium diffusion and its rapid buffering in intraflagellar signaling	2
Application of electron paramagnetic resonance spectroscopy for determining the relative nanoenvironment fluidity of polymeric micelles	2
Facilitating the simulation of sedimentation velocity data: new features of SViMULATE	2
Physics of collective cell migration	2
A spectral decomposition quality assessment tool for multi-wavelength AUC experiments with UltraScan	2
Beyond the US-SOMO-AF database: a new website for hydrodynamic, structural, and circular dichroism calculations on user-supplied structures	2
Biophysical and microbiological aspects of the interaction between Yersinia pestis PsaA and bacteriophage L-413C	2
Quantitative characterization of non-specific interaction of two globular proteins with Dextran T70 in a binary mixture	2
Proceedings of the 25th Analytical Ultracentrifugation Workshops and Symposium	2
Two-layer elastic models for single-yeast compressibility with flat microlevers	2
Molecular and thermodynamic mechanisms for protein adaptation	2
Syndiotactic hexamer peptide nanodots	2
Drug–ionic surfactant interactions: density, sound speed, spectroscopic, and electrochemical studies	2
Wave propagation through a viscous fluid-filled elastic tube under initial pressure: theoretical and biophysical model	2
Nitroxide spin, non-canonical amino acids and SDSL-EPR spectroscopy: a winning combination for protein dynamics studies	2
Mechanical properties of adherent cell sheets analyzed by deflection of supporting membrane	1
Ionizable lipids in bio-inspired nanocarriers	1
Physical aspects of epithelial cell–cell interactions: hidden system complexities	1
Correction: Abstracts	1
The inhibition of glucose uptake to erythrocytes: microwave dielectric response	1
Extreme enthalpy‒entropy compensation in the dimerization of small solutes in aqueous solution	1
15th EBSA congress, June 30 – July 4, 2025, Rome, Italy – Abstracts	1
Exploring the biomechanical response of human semicircular canals by a visualized bionic model	1
Competitive adsorption of a monoclonal antibody and amphiphilic polymers to the air–water interface	1
Annexin A5 stabilizes matrix vesicle-biomimetic lipid membranes: unravelling a new role of annexins in calcification	1
Location of oncogene-induced DNA damage sites revealed by quantitative analysis of a DNA counterstain	1
SDS-induced hexameric oligomerization of myotoxin-II from Bothrops asper assessed by sedimentation velocity and nuclear magnetic resonance	1
Quantitative analysis of mucociliary activity by computational high-speed video reflection microscopy	1
Specific TP53 mutations impair the recruitment of 53BP1 to DNA double-strand breaks underlying the mechanism of radioresistance	1
Effects of synergistic/antagonistic interactions between spermidine (3+) and putrescine (2+) on gene expression through higher-order DNA structural modification	1
N2 modified cap analogues as translation inhibitors and substrates for preparation of therapeutic mRNA	1
The origin of mutational epistasis	1
Exploring neural networks to uncover information-richer features for protein interaction prediction	1
Tautomeric equilibrium and spectroscopic properties of 8-azaguanine revealed by quantum chemistry methods	1
Comparison of three AUC techniques for the determination of the loading status and capsid titer of AAVs	1
Effects of sugar concentration on the electroporation, size distribution and average size of charged giant unilamellar vesicles	1
Structural investigation, computational analysis, and theoretical cryoprotectant approach of antifreeze protein type IV mutants	1
MIL-CELL: a tool for multi-scale simulation of yeast replication and prion transmission	1
Cell wall channels of Rhodococcus species: identification and characterization of the cell wall channels of Rhodococcus corynebacteroides and Rhodococcus ruber	1
The Structure of the LysR-type Transcriptional Regulator, CysB, Bound to the Inducer, N-acetylserine	1
Analysis of ligand binding mechanism by dimeric receptors using stopped-flow fluorimetry—application to the human decapping scavenger enzyme	1
EBSA at 40 – an updated history	1
Image analysis tools for improved characterization of nuclear chromatin patterns by confocal fluorescence microscopy	1
Rational design of potent phosphopeptide binders to endocrine Snk PBD domain by integrating machine learning optimization, molecular dynamics simulation, binding energetics rescoring, and in vitro aff	1
Extraction of geometric and transport parameters from the time constant of exocytosis transients measured by nanoscale electrodes	1
Neurotransmitter uptake of synaptic vesicles studied by X-ray diffraction	1
Experimental support for reclassification of the light scattering second virial coefficient from macromolecular solutions as a hydrodynamic parameter	1
Tracking reduction-induced molecular changes in pathological free light chains by SV-AUC	1
Advancing Italian biophysics: insights from the 27th SIBPA congress	1
Factors controlling protein evolvability—at the molecular scale	1
Correction: SEDNTERP: a calculation and database utility to aid interpretation of analytical ultracentrifugation and light scattering data	1
Suitability of double-stranded DNA as a molecular standard for the validation of analytical ultracentrifugation instruments	1
In silico study of cytochrome-C binding to a cardiolipin-containing membrane	1
Fragmentation of nucleoli in senescent cancer cells is associated with increased levels of polyadenylated transcripts derived from noncoding regions of rDNA units	1

Analysing the structure of antibodies using circular dichroism with an antibody augmented reference set and the algorithm SELCON	1
The role of cholesterol binding in the control of cholesterol by the Scap–Insig system	1
An improved platform for cultured neuronal network electrophysiology: multichannel optogenetics integrated with MEAs	1
A model for ribosome translocation based on the alternated displacement of its subunits	1
Voltage-sensing domains: structural and functional diversity	1
A stochastic mathematical model for coupling the cytosolic and sarcoplasmic calcium movements in diseased cardiac myocytes	1
Special Issue: 18th Congress of the Polish Biophysical Society	1
Exploring characteristic features for effective HCN1 channel inhibition using integrated analytical approaches: 3D QSAR, molecular docking, homology modelling, ADME and molecular dynamics	1
Molecular mechanisms of mitochondrial uncoupling: focus on 2,4-dinitrophenol	1
Predicting peptide orientation in membrane interactions: a review on transmembrane and surface-bound states	1
Inside the membrane: a closer look using elastic scattering techniques and friends	1
Sedimentation velocity FDS studies of antibodies in pooled human serum	1
Probing the interactions of the HIV-1 matrix protein-derived polybasic region with lipid bilayers: insights from AFM imaging and force spectroscopy	1
Active wetting of epithelial tissues: modeling considerations	1
Impact of glucose on a Gel-A-Based polyphenol biosensor: A QCM-D study	1