European Biophysics Journal With Biophysics Letters

Article	Citations
Biophysical characterization of the DNA binding motif of human phospholipid scramblase 1	148
Structure of a novel form of phosphopantetheine adenylyltransferase from Klebsiella pneumoniae at 2.59 Å resolution	32
Long-term memory in Staphylococcus aureus α-hemolysin ion channel kinetics	31
Mechanistic insights of neuronal calcium and IP3 signaling system regulating ATP release during ischemia in progression of Alzheimer’s disease	30
Real-time tilting and twisting motions of ligand-bound states of α7 nicotinic acetylcholine receptor	27
Characterization of Aquaporin Z proteoliposome structure and functionality via microscopy and scattering methods	26
Fluorescent bionanosensor for picomolar detection of biomarkers in fluids	23
Weak protein–bicelle binding quantification via surface-based DNA nanolevers	16
Use of cesium chloride density gradient ultracentrifugation for the purification and characterization of recombinant adeno-associated virus	14
Interaction of Pf4 tactoids with bacteria and synthetic colloidal rods	13
Choosing the right density for a concentrated protein system like gluten in a coarse-grained model	13
European Biophysics Journal - Special Issue Celebrating the 70th Anniversary of the Institute of Biophysics, Czech Academy of Sciences	13
Evidence from computational infrared spectroscopy against vibrational detection of propionate by human olfactory receptor OR51E2	13
A gene-encoded bioprotein second harmonic generation (SHG) probe from Autographa californica nuclear polyhedrosis virus (AcMNPV) polyhedrin for live cell imaging	12
Biophysical insights into plasmid DNA binding by deinococcus grandis Dps nanocage	11
A historical overview of the need for distinction between the attainment of thermodynamic equilibrium and a kinetic steady state in experimental studies	11
Statistical mechanics of soft collagenous tissues: a constitutive model with damage for cerebral bridging veins	10
Indenting multicellular spheroids with various tip geometries	10
Cysteine-mediated structural stabilization of the tetrameric GlpF	9
From survival of irradiated mice to modern molecular insights: a seventy-year journey in radiobiology at the institute of biophysics, Czech academy of sciences	9
Modeling study of kinesin-13 MCAK microtubule depolymerase	9
Molecular transport through nano-sized multipores of lipid vesicles: a COMSOL simulation study	8
Microfluidics for protein interaction studies: current methods, challenges, and future perspectives	8
Assessment of protein incorporation into SBA-15 particles and their structural changes	8
Numerical solution of compartment-based reaction/diffusion models with DABOSS algorithm	8

Pulling short DNA with mismatch base pairs	8
Computational discovery of dual potential inhibitors of SARS‐CoV‐2 spike/ACE2 and Mpro: 3D-pharmacophore, docking-based virtual screening, quantum mechanics and molecular dynamics	8
Analysis of residue–residue interactions in the structures of ASIC1a suggests possible gating mechanisms	8
Achieving femtomolar affinities in structure-based drug design	8
Electron currents mediated by tonoplast cytochromes b561	7
Optimizing electroporation via pulse modulation: a molecular dynamics study	7
Quadruplexes with a grain of salt: influence of cation type and concentration on DNA G4 stability	7
Analysis of proteins in the light of mutations	7
SViMULATE: a computer program facilitating interactive, multi-mode simulation of analytical ultracentrifugation data	7
The effect of ionic redistributions on the microwave dielectric response of cytosol water upon glucose uptake	6
Mechanical anisotropy of hair affected by genetic diseases highlights structural information related to differential crosslinking in keratins	6
Structural evidence of thioacetate reduction by fluorescent protein mRuby	6
Experimental extraction of Young’s modulus of MCF-7 tissue using atomic force microscopy and the spherical contact models	6
Time-dependent simulation of blood flow through an abdominal aorta with iliac arteries	6
Modulation of conformational features and oligomerization of MMACHC by cobalamin variants: impact of the R161Q mutation in cblC disease	6
Measuring bacterial oxygen consumption rate to probe metabolic signature and antimicrobial susceptibility	6
Proceedings of the 26th International Analytical Ultracentrifugation Workshop and Symposium	6
14th EBSA congress, July 31 – August 4, 2023, Stockholm, Sweden – Abstracts	6
Standardization of cross-site biophysical studies of bovine insulin amyloids is challenged by structural polymorphism	5
Sedimentation velocity analytical ultracentrifugation (SV-AUC) for adeno-associated virus characterization: impact of cell alignment	5
DNA methylation enhances cooperative disentanglement by the Hfq nucleoid-associated protein	5
Quenching of G4-DNA intrinsic fluorescence by ligands	5
Rational design of stapled helical peptides as antidiabetic PPARγ antagonists to target coactivator site by decreasing unfavorable entropy penalty instead of increasing favorable enthalpy contribution	5
The effects of lithium on human red blood cells studied using optical spectroscopy and laser trap	5
Thermodynamic and kinetic considerations in DNA triplex formation revealed by ITC	5
Erythrocytes membrane fluidity changes induced by adenylyl cyclase cascade activation: study using fluorescence recovery after photobleaching	5
Diversity of hydrodynamic radii of intrinsically disordered proteins	5
DNA binding to small anionic ligands: the case of Orange G dye	4
The cross-correlation-based analysis to digest the conformational dynamics of the mitoBK channels in terms of their modulation by flavonoids	4
On the utility of microfluidic systems to study protein interactions: advantages, challenges, and applications	4
Clinical use of electrodermal activity and current developments	4
A comparative characterisation of commercially available lipid-polymer nanoparticles formed from model membranes	4
Reciprocal effect on lateral diffusion of receptor for advanced glycation endproducts and toll-like receptor 4 in the HEK293 cell membrane	4
Structure and dynamics of pteridine reductase 1: the key phenomena relevant to enzyme function and drug design	4
Design of inhibitor peptide sequences based on the interfacial knowledge of the protein G-IgG crystallographic complex and their binding studies with IgG	4
The sleeping bacterium: shedding light on the resuscitation mechanism	4
Relation between flexibility and intrinsically disorder regions in thermosensitive TRP channels reveal allosteric effects	4
Structural and functional characterization of Caenorhabditis elegans cyclic GMP-activated channel TAX-4 via molecular dynamics simulations	4
Rethinking the protein folding problem from a new perspective	4
On the possibility of the existence of orienting hydrodynamic steering effects in the kinetics of receptor–ligand association	4
Molecular Biophysics Database (MBDB) makes raw measurements findable and reusable	4
A look into the future	3
Magnetic field based investigation of Brugada syndrome	3
Professor Emil Paleček: seven decades with electrodes and biomolecules at the Institute of Biophysics of the CAS	3
On-the-fly resolution enhancement in X-ray protein crystallography using electric field	3
Revealing the single-channel characteristics of OprD (OccAB1) porins from hospital strains of Acinetobacter baumannii	3
The role of heterogeneity of intersubunit interfaces in the outer membrane leaflet in maintaining GABAA receptor activity	3
A new UltraScan module for the characterization and quantification of analytical buoyant density equilibrium experiments to determine AAV capsid loading	3
Proton wave propagation along collagen fibers	3
Mammalian Nudt15 hydrolytic and binding activity on methylated guanosine mononucleotides	3

Peptide-based pore formation and cell membrane deformation: European Biophysics Journal Prizes at EBSA 2023	3
Molecular dynamics study of collective water vibrations in a DNA hydration shell	3
Analytical ultracentrifugation as a tool for exploring COSAN assemblies	3
AAV analysis by sedimentation velocity analytical ultracentrifugation: beyond empty and full capsids	3
Physical principles underpinning molecular-level protein evolution	3
An obituary: Dr. Helmut Cölfen 1965–2023	3
Flow-induced dispersion analysis for probing cyclodextrin–guest binding interactions	3
Hydrodynamic properties of macromolecules and nanoparticles in dilute solution: a brief essay on classical and modern concepts	3
Crystal structure of 4-amino-5-hydroxymethyl-2-methyl pyrimidine phosphate kinase (HMPP kinase) from Thermus thermophilus HB8	3
Systematic noise removal from analytical ultracentrifugation data with UltraScan	3
Exploring the influence of water micro assemblies on protein folding, enzyme catalysis and membrane dynamics	3
Determination of the size parameters of α-synuclein amyloid precursor forms through DLS analysis	3
Application of electron paramagnetic resonance spectroscopy for determining the relative nanoenvironment fluidity of polymeric micelles	2
Ribulose-1,5-bisphosphate carboxylase/oxygenase activase isoforms from diverse species show differences in oligomeric structure, thermal stability, and activity	2
Proceedings of the 25th Analytical Ultracentrifugation Workshops and Symposium	2
Application of artificial neural network for the mechano-bactericidal effect of bioinspired nanopatterned surfaces	2
Acytota and the evolution of complexity	2
An intramolecular disulphide bond in human 4E-T affects its binding to eIF4E1a protein	2
Determination of mRNA copy number in degradable lipid nanoparticles via density contrast analytical ultracentrifugation	2
Beyond the US-SOMO-AF database: a new website for hydrodynamic, structural, and circular dichroism calculations on user-supplied structures	2
Physics of collective cell migration	2
Two-layer elastic models for single-yeast compressibility with flat microlevers	2
Twist-stretch relations in nucleic acids	2
Structural analysis of the peptides temporin-Ra and temporin-Rb and interactions with model membranes	2
On the role of calcium diffusion and its rapid buffering in intraflagellar signaling	2
Comparative sedimentation equilibrium analysis of two IgG1 glycoforms: IgGCri and IgGWid	2
A robust fluorescence-based assay for human erythrocyte Ca++ efflux suitable for high-throughput inhibitor screens	2
Biophysical characterization of polyphenol aggregates in Moringa oleifera leaves water extract: stability and surface exposure effect on antioxidant activity under dilution	2
Apo and substrate-bound dihydropteroate synthase crystal structures from Thermus thermophilus HB8	2
Nitroxide spin, non-canonical amino acids and SDSL-EPR spectroscopy: a winning combination for protein dynamics studies	2
Stochastic models for cell polarization and crawling: journey from external fluctuations in reaction-diffusion system to internal noise effects	2
Quantitative characterization of non-specific interaction of two globular proteins with Dextran T70 in a binary mixture	2
Simulation of intracellular delivery through permeabilized multivesicular vesicles	2
A paradigm shift: analytical ultracentrifugation as a multi-attribute platform method in targeted protein degradation	2
Biophysical and microbiological aspects of the interaction between Yersinia pestis PsaA and bacteriophage L-413C	2
Molecular and thermodynamic mechanisms for protein adaptation	2
Mitochondrial alterations induced by Macrovipera lebetina venom	2
Statistical mechanics of bone damage: a constitutive model	2
Tracking reduction-induced molecular changes in pathological free light chains by SV-AUC	1
Competitive adsorption of a monoclonal antibody and amphiphilic polymers to the air–water interface	1
Ionizable lipids in bio-inspired nanocarriers	1
Impact of glucose on a Gel-A-Based polyphenol biosensor: A QCM-D study	1
Rational design of potent phosphopeptide binders to endocrine Snk PBD domain by integrating machine learning optimization, molecular dynamics simulation, binding energetics rescoring, and in vitro aff	1
Correction: SEDNTERP: a calculation and database utility to aid interpretation of analytical ultracentrifugation and light scattering data	1
Mechanical properties of adherent cell sheets analyzed by deflection of supporting membrane	1
Annexin A5 stabilizes matrix vesicle-biomimetic lipid membranes: unravelling a new role of annexins in calcification	1
MIL-CELL: a tool for multi-scale simulation of yeast replication and prion transmission	1
Predicting peptide orientation in membrane interactions: a review on transmembrane and surface-bound states	1
Correction: Modifying recombinant purple acid phosphatase using computational design	1
Molecular mechanisms of mitochondrial uncoupling: focus on 2,4-dinitrophenol	1
An improved platform for cultured neuronal network electrophysiology: multichannel optogenetics integrated with MEAs	1
The Structure of the LysR-type Transcriptional Regulator, CysB, Bound to the Inducer, N-acetylserine	1
Computational study on the impact of linkage sequence on the structure and dynamics of lignin	1
Tautomeric equilibrium and spectroscopic properties of 8-azaguanine revealed by quantum chemistry methods	1
Advancing Italian biophysics: insights from the 27th SIBPA congress	1
Swimming polarity inversion in uncultured magnetotactic cocci	1
Inhibitor design for TMPRSS2: insights from computational analysis of its backbone hydrogen bonds using a simple descriptor	1
Voltage-sensing domains: structural and functional diversity	1
Physical aspects of epithelial cell–cell interactions: hidden system complexities	1
Experimental support for reclassification of the light scattering second virial coefficient from macromolecular solutions as a hydrodynamic parameter	1
N2 modified cap analogues as translation inhibitors and substrates for preparation of therapeutic mRNA	1
Specific TP53 mutations impair the recruitment of 53BP1 to DNA double-strand breaks underlying the mechanism of radioresistance	1
Fragmentation of nucleoli in senescent cancer cells is associated with increased levels of polyadenylated transcripts derived from noncoding regions of rDNA units	1
Correction: Abstracts	1
Suitability of double-stranded DNA as a molecular standard for the validation of analytical ultracentrifugation instruments	1
Comparison of three AUC techniques for the determination of the loading status and capsid titer of AAVs	1
Homologous series of N-acylmelatonins: synthesis, biophysical studies, enhanced antioxidant, antimicrobial and anticancer activities	1
SDS-induced hexameric oligomerization of myotoxin-II from Bothrops asper assessed by sedimentation velocity and nuclear magnetic resonance	1
Exploring characteristic features for effective HCN1 channel inhibition using integrated analytical approaches: 3D QSAR, molecular docking, homology modelling, ADME and molecular dynamics	1
Effects of synergistic/antagonistic interactions between spermidine (3+) and putrescine (2+) on gene expression through higher-order DNA structural modification	1
Special Issue: 18th Congress of the Polish Biophysical Society	1
Extreme enthalpy‒entropy compensation in the dimerization of small solutes in aqueous solution	1
Sedimentation velocity FDS studies of antibodies in pooled human serum	1
Inside the membrane: a closer look using elastic scattering techniques and friends	1
Correction to: Relation between flexibility and intrinsically disorder regions in thermosensitive TRP channels reveal allosteric effects	1
In sample pH measurement by 31P phosphate NMR: application to measure the intrinsic GTPase activity of Rab1a	1
Protein arginine methyltransferases as regulators of phase separation: implications in cancer and neurodegenerative diseases	1
In silico study of cytochrome-C binding to a cardiolipin-containing membrane	1
Drug–ionic surfactant interactions: density, sound speed, spectroscopic, and electrochemical studies	1
Structural adaptability of SARS-CoV-2 Nsp1 with the host network	1

Disruption of bacterial membranes by plant extracts of celandine and dandelion: microbiological and langmuir monolayer studies	1
Non-linear Hamiltonian models for DNA	1
Synthesis and biophysical characterization of bioengineered cytochrome nanowires	1
A stochastic mathematical model for coupling the cytosolic and sarcoplasmic calcium movements in diseased cardiac myocytes	1
Exploring the biomechanical response of human semicircular canals by a visualized bionic model	1
Probing the interactions of the HIV-1 matrix protein-derived polybasic region with lipid bilayers: insights from AFM imaging and force spectroscopy	1
Structural investigation, computational analysis, and theoretical cryoprotectant approach of antifreeze protein type IV mutants	1
Location of oncogene-induced DNA damage sites revealed by quantitative analysis of a DNA counterstain	1
Factors controlling protein evolvability—at the molecular scale	1
Effects of gramicidin A on the deformation, membrane permeation and membrane stability of lipid vesicles by Fe3O4 nanoparticles	1
Quantitative analysis of mucociliary activity by computational high-speed video reflection microscopy	1
The origin of mutational epistasis	1
Image analysis tools for improved characterization of nuclear chromatin patterns by confocal fluorescence microscopy	1
Perspective on 3D microfluidic eye-on-a-chip technology for ophthalmological research	1
EBSA at 40 – an updated history	1
Bead model hydrodynamics: an in-depth comparison between GRPY and ZENO	1
15th EBSA congress, June 30 – July 4, 2025, Rome, Italy – Abstracts	1
Peptide nucleic acid conjugates and their antimicrobial applications—a mini-review	1
Analysing the structure of antibodies using circular dichroism with an antibody augmented reference set and the algorithm SELCON	1
Simulation of Gilbert theory for self-association in sedimentation velocity experiments: a guide to evaluate best fitting models	1
A model for ribosome translocation based on the alternated displacement of its subunits	1
Production and characterisation of modularly deuterated UBE2D1–Ub conjugate by small angle neutron and X-ray scattering	1
Exploring neural networks to uncover information-richer features for protein interaction prediction	1
Tracking the rotational dynamics of Chlamydomonas reinhardtii across culture days using optical tweezers	1
Strong non-ideality effects at low protein concentrations: considerations for elongated proteins	1
Facilitating the simulation of sedimentation velocity data: new features of SViMULATE	1
Extraction of geometric and transport parameters from the time constant of exocytosis transients measured by nanoscale electrodes	1
A spectral decomposition quality assessment tool for multi-wavelength AUC experiments with UltraScan	1
Analysis of ligand binding mechanism by dimeric receptors using stopped-flow fluorimetry—application to the human decapping scavenger enzyme	1
Active wetting of epithelial tissues: modeling considerations	1