European Biophysics Journal With Biophysics Letters

Article	Citations
Biophysical characterization of the DNA binding motif of human phospholipid scramblase 1	136
Structure of a novel form of phosphopantetheine adenylyltransferase from Klebsiella pneumoniae at 2.59 Å resolution	32
Long-term memory in Staphylococcus aureus α-hemolysin ion channel kinetics	29
Mechanistic insights of neuronal calcium and IP3 signaling system regulating ATP release during ischemia in progression of Alzheimer’s disease	28
Real-time tilting and twisting motions of ligand-bound states of α7 nicotinic acetylcholine receptor	25
Fluorescent bionanosensor for picomolar detection of biomarkers in fluids	24
Weak protein–bicelle binding quantification via surface-based DNA nanolevers	23
Use of cesium chloride density gradient ultracentrifugation for the purification and characterization of recombinant adeno-associated virus	14
European Biophysics Journal - Special Issue Celebrating the 70th Anniversary of the Institute of Biophysics, Czech Academy of Sciences	13
Biophysical insights into plasmid DNA binding by deinococcus grandis Dps nanocage	13
Characterization of Aquaporin Z proteoliposome structure and functionality via microscopy and scattering methods	13
Choosing the right density for a concentrated protein system like gluten in a coarse-grained model	13
Interaction of Pf4 tactoids with bacteria and synthetic colloidal rods	12
Evidence from computational infrared spectroscopy against vibrational detection of propionate by human olfactory receptor OR51E2	11
A gene-encoded bioprotein second harmonic generation (SHG) probe from Autographa californica nuclear polyhedrosis virus (AcMNPV) polyhedrin for live cell imaging	11
Assessment of protein incorporation into SBA-15 particles and their structural changes	10
Self-assembly of smooth muscle myosin filaments: adaptation of filament length by telokin and Mg·ATP	10
Cysteine-mediated structural stabilization of the tetrameric GlpF	10
From survival of irradiated mice to modern molecular insights: a seventy-year journey in radiobiology at the institute of biophysics, Czech academy of sciences	9
Modeling study of kinesin-13 MCAK microtubule depolymerase	9
Achieving femtomolar affinities in structure-based drug design	9
Microfluidics for protein interaction studies: current methods, challenges, and future perspectives	8
Statistical mechanics of soft collagenous tissues: a constitutive model with damage for cerebral bridging veins	8
Modulation of conformational features and oligomerization of MMACHC by cobalamin variants: impact of the R161Q mutation in cblC disease	8
Indenting multicellular spheroids with various tip geometries	8

Analysis of residue–residue interactions in the structures of ASIC1a suggests possible gating mechanisms	8
Pulling short DNA with mismatch base pairs	8
Quadruplexes with a grain of salt: influence of cation type and concentration on DNA G4 stability	7
Measuring bacterial oxygen consumption rate to probe metabolic signature and antimicrobial susceptibility	7
14th EBSA congress, July 31 – August 4, 2023, Stockholm, Sweden – Abstracts	7
Numerical solution of compartment-based reaction/diffusion models with DABOSS algorithm	7
Electron currents mediated by tonoplast cytochromes b561	7
Computational discovery of dual potential inhibitors of SARS‐CoV‐2 spike/ACE2 and Mpro: 3D-pharmacophore, docking-based virtual screening, quantum mechanics and molecular dynamics	7
SViMULATE: a computer program facilitating interactive, multi-mode simulation of analytical ultracentrifugation data	7
Molecular transport through nano-sized multipores of lipid vesicles: a COMSOL simulation study	7
Analysis of proteins in the light of mutations	7
Optimizing electroporation via pulse modulation: a molecular dynamics study	7
Mechanical anisotropy of hair affected by genetic diseases highlights structural information related to differential crosslinking in keratins	6
Time-dependent simulation of blood flow through an abdominal aorta with iliac arteries	6
Diversity of hydrodynamic radii of intrinsically disordered proteins	6
Experimental extraction of Young’s modulus of MCF-7 tissue using atomic force microscopy and the spherical contact models	6
The effects of lithium on human red blood cells studied using optical spectroscopy and laser trap	6
Erythrocytes membrane fluidity changes induced by adenylyl cyclase cascade activation: study using fluorescence recovery after photobleaching	6
The effect of ionic redistributions on the microwave dielectric response of cytosol water upon glucose uptake	6
Sedimentation velocity analytical ultracentrifugation (SV-AUC) for adeno-associated virus characterization: impact of cell alignment	6
Proceedings of the 26th International Analytical Ultracentrifugation Workshop and Symposium	6
Design of inhibitor peptide sequences based on the interfacial knowledge of the protein G-IgG crystallographic complex and their binding studies with IgG	5
Standardization of cross-site biophysical studies of bovine insulin amyloids is challenged by structural polymorphism	5
Reciprocal effect on lateral diffusion of receptor for advanced glycation endproducts and toll-like receptor 4 in the HEK293 cell membrane	5
DNA binding to small anionic ligands: the case of Orange G dye	5
Rational design of stapled helical peptides as antidiabetic PPARγ antagonists to target coactivator site by decreasing unfavorable entropy penalty instead of increasing favorable enthalpy contribution	5
The cross-correlation-based analysis to digest the conformational dynamics of the mitoBK channels in terms of their modulation by flavonoids	5
Thermodynamic and kinetic considerations in DNA triplex formation revealed by ITC	5
DNA methylation enhances cooperative disentanglement by the Hfq nucleoid-associated protein	5
Structure and dynamics of pteridine reductase 1: the key phenomena relevant to enzyme function and drug design	4
Structural and functional characterization of Caenorhabditis elegans cyclic GMP-activated channel TAX-4 via molecular dynamics simulations	4
Clinical use of electrodermal activity and current developments	4
On the utility of microfluidic systems to study protein interactions: advantages, challenges, and applications	4
Quenching of G4-DNA intrinsic fluorescence by ligands	4
The sleeping bacterium: shedding light on the resuscitation mechanism	4
A comparative characterisation of commercially available lipid-polymer nanoparticles formed from model membranes	4
Relation between flexibility and intrinsically disorder regions in thermosensitive TRP channels reveal allosteric effects	4
Rethinking the protein folding problem from a new perspective	4
Molecular Biophysics Database (MBDB) makes raw measurements findable and reusable	4
On the possibility of the existence of orienting hydrodynamic steering effects in the kinetics of receptor–ligand association	4
Acytota and the evolution of complexity	3
Hydrodynamic properties of macromolecules and nanoparticles in dilute solution: a brief essay on classical and modern concepts	3
Crystal structure of 4-amino-5-hydroxymethyl-2-methyl pyrimidine phosphate kinase (HMPP kinase) from Thermus thermophilus HB8	3
Exploring the influence of water micro assemblies on protein folding, enzyme catalysis and membrane dynamics	3
On-the-fly resolution enhancement in X-ray protein crystallography using electric field	3
AAV analysis by sedimentation velocity analytical ultracentrifugation: beyond empty and full capsids	3
A paradigm shift: analytical ultracentrifugation as a multi-attribute platform method in targeted protein degradation	3
The role of heterogeneity of intersubunit interfaces in the outer membrane leaflet in maintaining GABAA receptor activity	3
Revealing the single-channel characteristics of OprD (OccAB1) porins from hospital strains of Acinetobacter baumannii	3
Analytical ultracentrifugation as a tool for exploring COSAN assemblies	3

Peptide-based pore formation and cell membrane deformation: European Biophysics Journal Prizes at EBSA 2023	3
Flow-induced dispersion analysis for probing cyclodextrin–guest binding interactions	3
Mammalian Nudt15 hydrolytic and binding activity on methylated guanosine mononucleotides	3
Comparative sedimentation equilibrium analysis of two IgG1 glycoforms: IgGCri and IgGWid	3
Professor Emil Paleček: seven decades with electrodes and biomolecules at the Institute of Biophysics of the CAS	3
Molecular dynamics study of collective water vibrations in a DNA hydration shell	3
Systematic noise removal from analytical ultracentrifugation data with UltraScan	3
A look into the future	3
Magnetic field based investigation of Brugada syndrome	3
An obituary: Dr. Helmut Cölfen 1965–2023	3
Application of electron paramagnetic resonance spectroscopy for determining the relative nanoenvironment fluidity of polymeric micelles	2
Two-layer elastic models for single-yeast compressibility with flat microlevers	2
Tracking the rotational dynamics of Chlamydomonas reinhardtii across culture days using optical tweezers	2
Beyond the US-SOMO-AF database: a new website for hydrodynamic, structural, and circular dichroism calculations on user-supplied structures	2
Nitroxide spin, non-canonical amino acids and SDSL-EPR spectroscopy: a winning combination for protein dynamics studies	2
Twist-stretch relations in nucleic acids	2
Determination of mRNA copy number in degradable lipid nanoparticles via density contrast analytical ultracentrifugation	2
An intramolecular disulphide bond in human 4E-T affects its binding to eIF4E1a protein	2
A new UltraScan module for the characterization and quantification of analytical buoyant density equilibrium experiments to determine AAV capsid loading	2
Biophysical characterization of polyphenol aggregates in Moringa oleifera leaves water extract: stability and surface exposure effect on antioxidant activity under dilution	2
Facilitating the simulation of sedimentation velocity data: new features of SViMULATE	2
Physics of collective cell migration	2
Drug–ionic surfactant interactions: density, sound speed, spectroscopic, and electrochemical studies	2
Syndiotactic hexamer peptide nanodots	2
Application of artificial neural network for the mechano-bactericidal effect of bioinspired nanopatterned surfaces	2
Proceedings of the 25th Analytical Ultracentrifugation Workshops and Symposium	2
Quantitative characterization of non-specific interaction of two globular proteins with Dextran T70 in a binary mixture	2
Simulation of intracellular delivery through permeabilized multivesicular vesicles	2
On the role of calcium diffusion and its rapid buffering in intraflagellar signaling	2
A robust fluorescence-based assay for human erythrocyte Ca++ efflux suitable for high-throughput inhibitor screens	2
Mitochondrial alterations induced by Macrovipera lebetina venom	2
Effects of sugar concentration on the electroporation, size distribution and average size of charged giant unilamellar vesicles	2
Molecular and thermodynamic mechanisms for protein adaptation	2
Inhibitor design for TMPRSS2: insights from computational analysis of its backbone hydrogen bonds using a simple descriptor	2
Statistical mechanics of bone damage: a constitutive model	2
Biophysical and microbiological aspects of the interaction between Yersinia pestis PsaA and bacteriophage L-413C	2
Structural analysis of the peptides temporin-Ra and temporin-Rb and interactions with model membranes	2
Determination of the size parameters of α-synuclein amyloid precursor forms through DLS analysis	2
Physical principles underpinning molecular-level protein evolution	2
Ribulose-1,5-bisphosphate carboxylase/oxygenase activase isoforms from diverse species show differences in oligomeric structure, thermal stability, and activity	2
A model for ribosome translocation based on the alternated displacement of its subunits	1
Comparison of three AUC techniques for the determination of the loading status and capsid titer of AAVs	1
Specific TP53 mutations impair the recruitment of 53BP1 to DNA double-strand breaks underlying the mechanism of radioresistance	1
Location of oncogene-induced DNA damage sites revealed by quantitative analysis of a DNA counterstain	1
Rational design of potent phosphopeptide binders to endocrine Snk PBD domain by integrating machine learning optimization, molecular dynamics simulation, binding energetics rescoring, and in vitro aff	1
Fragmentation of nucleoli in senescent cancer cells is associated with increased levels of polyadenylated transcripts derived from noncoding regions of rDNA units	1
Advancing Italian biophysics: insights from the 27th SIBPA congress	1
Mechanical properties of adherent cell sheets analyzed by deflection of supporting membrane	1
Effects of synergistic/antagonistic interactions between spermidine (3+) and putrescine (2+) on gene expression through higher-order DNA structural modification	1
Exploring neural networks to uncover information-richer features for protein interaction prediction	1
Active wetting of epithelial tissues: modeling considerations	1
Homologous series of N-acylmelatonins: synthesis, biophysical studies, enhanced antioxidant, antimicrobial and anticancer activities	1
A spectral decomposition quality assessment tool for multi-wavelength AUC experiments with UltraScan	1
Inside the membrane: a closer look using elastic scattering techniques and friends	1
Voltage-sensing domains: structural and functional diversity	1
EBSA at 40 – an updated history	1
Tautomeric equilibrium and spectroscopic properties of 8-azaguanine revealed by quantum chemistry methods	1
Annexin A5 stabilizes matrix vesicle-biomimetic lipid membranes: unravelling a new role of annexins in calcification	1
Analysis of ligand binding mechanism by dimeric receptors using stopped-flow fluorimetry—application to the human decapping scavenger enzyme	1
Ionizable lipids in bio-inspired nanocarriers	1
Competitive adsorption of a monoclonal antibody and amphiphilic polymers to the air–water interface	1
Special Issue: 18th Congress of the Polish Biophysical Society	1
A stochastic mathematical model for coupling the cytosolic and sarcoplasmic calcium movements in diseased cardiac myocytes	1
Structural investigation, computational analysis, and theoretical cryoprotectant approach of antifreeze protein type IV mutants	1
The origin of mutational epistasis	1
Factors controlling protein evolvability—at the molecular scale	1
Sedimentation velocity FDS studies of antibodies in pooled human serum	1
Suitability of double-stranded DNA as a molecular standard for the validation of analytical ultracentrifugation instruments	1
In silico study of cytochrome-C binding to a cardiolipin-containing membrane	1
15th EBSA congress, June 30 – July 4, 2025, Rome, Italy – Abstracts	1
The role of cholesterol binding in the control of cholesterol by the Scap–Insig system	1
Exploring the biomechanical response of human semicircular canals by a visualized bionic model	1
Analysing the structure of antibodies using circular dichroism with an antibody augmented reference set and the algorithm SELCON	1
Synthesis and biophysical characterization of bioengineered cytochrome nanowires	1
Exploring characteristic features for effective HCN1 channel inhibition using integrated analytical approaches: 3D QSAR, molecular docking, homology modelling, ADME and molecular dynamics	1
Molecular mechanisms of mitochondrial uncoupling: focus on 2,4-dinitrophenol	1
Quantitative analysis of mucociliary activity by computational high-speed video reflection microscopy	1
Tracking reduction-induced molecular changes in pathological free light chains by SV-AUC	1
Predicting peptide orientation in membrane interactions: a review on transmembrane and surface-bound states	1
The Structure of the LysR-type Transcriptional Regulator, CysB, Bound to the Inducer, N-acetylserine	1

Correction: Abstracts	1
Experimental support for reclassification of the light scattering second virial coefficient from macromolecular solutions as a hydrodynamic parameter	1
Impact of glucose on a Gel-A-Based polyphenol biosensor: A QCM-D study	1
Correction: SEDNTERP: a calculation and database utility to aid interpretation of analytical ultracentrifugation and light scattering data	1
Probing the interactions of the HIV-1 matrix protein-derived polybasic region with lipid bilayers: insights from AFM imaging and force spectroscopy	1
Physical aspects of epithelial cell–cell interactions: hidden system complexities	1
N2 modified cap analogues as translation inhibitors and substrates for preparation of therapeutic mRNA	1
SDS-induced hexameric oligomerization of myotoxin-II from Bothrops asper assessed by sedimentation velocity and nuclear magnetic resonance	1
Extraction of geometric and transport parameters from the time constant of exocytosis transients measured by nanoscale electrodes	1
Neurotransmitter uptake of synaptic vesicles studied by X-ray diffraction	1
Image analysis tools for improved characterization of nuclear chromatin patterns by confocal fluorescence microscopy	1