OOIR: Observatory of International Research

Papers

(The median citation count of European Biophysics Journal With Biophysics Letters is 2. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-02-01 to 2025-02-01.)

Article	Citations
Quenching of G4-DNA intrinsic fluorescence by ligands	64
Single-molecule localisation microscopy: accounting for chance co-localisation between foci in bacterial cells	52
Structure and dynamics of pteridine reductase 1: the key phenomena relevant to enzyme function and drug design	51
Real-time tilting and twisting motions of ligand-bound states of α7 nicotinic acetylcholine receptor	41
Acoustofluidic interferometric device for rapid single-cell physical phenotyping	35
Biophysical characterization of the DNA binding motif of human phospholipid scramblase 1	32
A study on the secondary structure of the metalloregulatory protein CueR: effect of pH, metal ions and DNA	28
The effects of incubation media on the assessment of the shape of human erythrocytes by flow cytometry: a contribution to mathematical data interpretation to enable wider application of the method	24
Mechanistic insights of neuronal calcium and IP3 signaling system regulating ATP release during ischemia in progression of Alzheimer’s disease	23
Systems of conductive skin for power transfer in clinical applications	23
A robust fluorescence-based assay for human erythrocyte Ca++ efflux suitable for high-throughput inhibitor screens	22
Retrospective rationalization of disparities between the concentration dependence of diffusion coefficients obtained by boundary spreading and dynamic light scattering	20
Analysis of patchclamp recordings: model-free multiscale methods and software	17
Peptide nucleic acid conjugates and their antimicrobial applications—a mini-review	17
Structural heterogeneity and precision of implications drawn from cryo-electron microscopy structures: SARS-CoV-2 spike-protein mutations as a test case	16
A multi-laboratory benchmark study of isothermal titration calorimetry (ITC) using Ca2+ and Mg2+ binding to EDTA	16
Structure, gating and interactions of the voltage-dependent anion channel	15
Design of inhibitor peptide sequences based on the interfacial knowledge of the protein G-IgG crystallographic complex and their binding studies with IgG	15
Structure of a novel form of phosphopantetheine adenylyltransferase from Klebsiella pneumoniae at 2.59 Å resolution	15
Long-term memory in Staphylococcus aureus α-hemolysin ion channel kinetics	14
Microfabricated cantilevers for parallelized cell-cell adhesion measurements	14
The cross-correlation-based analysis to digest the conformational dynamics of the mitoBK channels in terms of their modulation by flavonoids	14
Non-linear Hamiltonian models for DNA	14
Determination of mRNA copy number in degradable lipid nanoparticles via density contrast analytical ultracentrifugation	11
Rethinking the protein folding problem from a new perspective	11

BASIS: BioAnalysis SEDFIT integrated software for cGMP analysis of SV-AUC data	10
A quantitative interspecies comparison of the respiratory mucociliary clearance mechanism	10
Reciprocal effect on lateral diffusion of receptor for advanced glycation endproducts and toll-like receptor 4 in the HEK293 cell membrane	10
Strong non-ideality effects at low protein concentrations: considerations for elongated proteins	10
Molecular dynamics simulation or structure refinement of proteins: are solvent molecules required? A case study using hen lysozyme	10
Simulation of Gilbert theory for self-association in sedimentation velocity experiments: a guide to evaluate best fitting models	10
Structural and biochemical analyses of the tetrameric cell binding domain of Lys170 from enterococcal phage F170/08	10
Generation of unfolded outer membrane protein ensembles defined by hydrodynamic properties	9
Reflectometry and molecular dynamics study of the impact of cholesterol and melatonin on model lipid membranes	9
The Structure of the LysR-type Transcriptional Regulator, CysB, Bound to the Inducer, N-acetylserine	9
Quantitative characterization of non-specific interaction of two globular proteins with Dextran T70 in a binary mixture	8
Computational study on the impact of linkage sequence on the structure and dynamics of lignin	8
Structural investigation, computational analysis, and theoretical cryoprotectant approach of antifreeze protein type IV mutants	8
Twist-stretch relations in nucleic acids	8
Structural features and stability of apo- and holo-forms of a simple iron–sulfur protein	7
SDS-induced hexameric oligomerization of myotoxin-II from Bothrops asper assessed by sedimentation velocity and nuclear magnetic resonance	7
Relation between flexibility and intrinsically disorder regions in thermosensitive TRP channels reveal allosteric effects	7
Correction to: Lipoic acid nanoforms based on phosphatidylcholine: production and characteristics	7
Cu(ii) complex with auxin (3-indoleacetic acid) and an aromatic planar ligand: synthesis, crystal structure, biomolecular interactions and radical scavenging activity	7
Correction to: Relation between flexibility and intrinsically disorder regions in thermosensitive TRP channels reveal allosteric effects	7
Special issue: Multicomponent lipid membranes—how molecular organisation leads to function	7
Ultrasound-induced protein restructuring and ordered aggregation to form amyloid crystals	7
Morphological, fractal, and textural features for the blood cell classification: the case of acute myeloid leukemia	7
A stalk fluid forming above the transition from the lamellar to the rhombohedral phase of lipid membranes	6
Isothermal titration calorimetry in the single-injection mode with imperfect mixing	6
Mechanisms of stationary voltage fluctuation in the neuromuscular junction endplate and corresponding denoising paradigms	6
Evolution of frustrated and stabilising contacts in reconstructed ancient proteins	6
Kinetic and thermodynamic modeling of a voltage-gated sodium channel	6
The importance of hydrophobic interactions in the structure of transcription systems	6
Syndiotactic hexamer peptide nanodots	6
Production and characterisation of modularly deuterated UBE2D1–Ub conjugate by small angle neutron and X-ray scattering	6
Swimming polarity inversion in uncultured magnetotactic cocci	6
On the utility of microfluidic systems to study protein interactions: advantages, challenges, and applications	6
Interaction standards for biophysics: anti-lysozyme nanobodies	6
Experimental support for reclassification of the light scattering second virial coefficient from macromolecular solutions as a hydrodynamic parameter	6
The inhibition of glucose uptake to erythrocytes: microwave dielectric response	6
Interceptor potential of C60 fullerene aqueous solution: a comparative analysis using the example of the antitumor antibiotic mitoxantrone	5
Insight into dual fluorescence effects induced by molecular aggregation occurring in membrane model systems containing 1,3,4-thiadiazole derivatives	5
Structure and mechanism of secondary sulfonamide binding to carbonic anhydrases	5
Standard operation procedure for switchSENSE DRX systems	5
Ultraviolet C intensity dependence of decontamination efficiency for pathogens as function of repacked metamaterials with screw channels	5
Two-layer elastic models for single-yeast compressibility with flat microlevers	5
Non-contact elastography methods in mechanobiology: a point of view	5
Choosing the right density for a concentrated protein system like gluten in a coarse-grained model	5
The origin of mutational epistasis	5
Correction to: Macromolecular interactions in vitro, comparing classical and novel approaches	5
A gene-encoded bioprotein second harmonic generation (SHG) probe from Autographa californica nuclear polyhedrosis virus (AcMNPV) polyhedrin for live cell imaging	5
DNA–MBF1 study using molecular dynamics simulations	5
Vibration spectra of DNA and RNA segments	5
A comparative characterisation of commercially available lipid-polymer nanoparticles formed from model membranes	5

Application of artificial neural network for the mechano-bactericidal effect of bioinspired nanopatterned surfaces	5
Influence of temperature and salt on coacervation in an aqueous mixture of poly-L-lysine (PLL) and poly-(sodium styrene sulfonate) (PSSNa)	5
Sedimentation velocity FDS studies of antibodies in pooled human serum	5
Application of electron paramagnetic resonance spectroscopy for determining the relative nanoenvironment fluidity of polymeric micelles	5
Quantifying force transmission through fibroblasts: changes of traction forces under external shearing	4
Amyloid fibril length distribution from dynamic light scattering data	4
13th EBSA congress, July 24–28, 2021, Vienna, Austria	4
Community-building and promotion of technological excellence in molecular biophysics: the ARBRE–MOBIEU network	4
‘Chain and running’ induced by mechanical interactions among cells of different phenotypes in the Bacillus subtilis biofilm	4
Fluorescence-based techniques for the detection of the oligomeric status of proteins: implication in amyloidogenic diseases	4
The effects of the chemical environment of menaquinones in lipid monolayers on mercury electrodes on the thermodynamics and kinetics of their electrochemistry	4
Energetic basis of hydrogen bond formation in aqueous solution	4
Nanoengineering for Mechanobiology “N4M-20”	4
A fit-less approach to the elasticity of the handles in optical tweezers experiments	4
Amino acid side chain contribution to protein FTIR spectra: impact on secondary structure evaluation	4
Modeling study of kinesin-13 MCAK microtubule depolymerase	4
A method to assess the robustness of complex mathematical models used for quantitative interpretation of experimental data by nonlinear regression analysis: application to high-affinity binding models	4
Beyond the US-SOMO-AF database: a new website for hydrodynamic, structural, and circular dichroism calculations on user-supplied structures	4
Molecular dynamics study of collective water vibrations in a DNA hydration shell	4
Self-assembly of smooth muscle myosin filaments: adaptation of filament length by telokin and Mg·ATP	4
Revealing the single-channel characteristics of OprD (OccAB1) porins from hospital strains of Acinetobacter baumannii	3
Proximity-induced electrodeformation and membrane capacitance coupling between cells	3
Uncertainty in protein–ligand binding constants: asymmetric confidence intervals versus standard errors	3
Structure and dynamics of sodium alginate as elucidated by chemical shift anisotropy and site-specific spin–lattice relaxation time measurements	3
Systematic analysis and molecular profiling of EGFR allosteric inhibitor cross-reactivity across the proto-oncogenic ErbB family kinases by integrating dynamics simulation, energetics calculation and	3
The effects of short term hyperglycemia on human red blood cells studied using Raman spectroscopy and optical trap	3
On the possibility of the existence of orienting hydrodynamic steering effects in the kinetics of receptor–ligand association	3
Active wetting of epithelial tissues: modeling considerations	3
Site-directed mutagenesis at the Glu78 in Ec-NhaA transporter impacting ion exchange: a biophysical study	3
Fluorescence-coupled micropipette aspiration assay to examine calcium mobilization caused by red blood cell mechanosensing	3
Physics of collective cell migration	3
Effective inhibition of insulin amyloid fibril aggregation by nickel(II) complexes containing heterocyclic thiosemicarbazones	3
Molecular and thermodynamic mechanisms for protein adaptation	3
Studies of transmembrane peptides by pulse dipolar spectroscopy with semi-rigid TOPP spin labels	3
Drug–ionic surfactant interactions: density, sound speed, spectroscopic, and electrochemical studies	3
Hydrodynamic characterization of a vesicular stomatitis virus-based oncolytic virus using analytical ultracentrifugation	3
Standard protocol for mass photometry experiments	2
Macromolecular interactions in vitro, comparing classical and novel approaches	2
Standard operating procedure for fluorescent thermal shift assay (FTSA) for determination of protein–ligand binding and protein stability	2
The conformational properties of alamethicin in ethanol studied by NMR	2
Development of 48-condition buffer screen for protein stability assessment	2
Peptide-based pore formation and cell membrane deformation: European Biophysics Journal Prizes at EBSA 2023	2
Lipid headgroup and side chain architecture determine manganese-induced dose dependent membrane rigidification and liposome size increase	2
Observation of magnet-induced star-like radiation of a plasma created from cancer cells in a laser trap	2
Pulling short DNA with mismatch base pairs	2
Quality control of purified proteins to improve data quality and reproducibility: results from a large-scale survey	2
Comparison of three AUC techniques for the determination of the loading status and capsid titer of AAVs	2
Reproducibility and accuracy of microscale thermophoresis in the NanoTemper Monolith: a multi laboratory benchmark study	2
Wave propagation through a viscous fluid-filled elastic tube under initial pressure: theoretical and biophysical model	2
Extending the double-dispersion Cole–Cole, Cole–Davidson and Havriliak–Negami electrochemical impedance spectroscopy models	2
NMR and dynamic light scattering give different diffusion information for short-living protein oligomers. Human serum albumin in water solutions of metal ions	2
Atomistic molecular dynamics simulations of tubulin heterodimers explain the motion of a microtubule	2
Physical aspects of epithelial cell–cell interactions: hidden system complexities	2
Systematic noise removal from analytical ultracentrifugation data with UltraScan	2
SViMULATE: a computer program facilitating interactive, multi-mode simulation of analytical ultracentrifugation data	2
Inhibitor design for TMPRSS2: insights from computational analysis of its backbone hydrogen bonds using a simple descriptor	2
Effects of sugar concentration on the electroporation, size distribution and average size of charged giant unilamellar vesicles	2
A quantitative calcium phosphate nanocluster model of the casein micelle: the average size, size distribution and surface properties	2
Correction to: Thermodynamics of protein folding: methodology, data analysis and interpretation of data	2
Isothermal titration calorimetry (ITC): a standard operating procedure (SOP)	2
Optimizing high-throughput viral vector characterization with density gradient equilibrium analytical ultracentrifugation	2
Interactive multiple binding of oleic acid, warfarin and ibuprofen with human serum albumin revealed by thermal and fluorescence studies	2
AAV analysis by sedimentation velocity analytical ultracentrifugation: beyond empty and full capsids	2
Protein-dependent membrane remodeling in mitochondrial morphology and clathrin-mediated endocytosis	2
A spectral decomposition quality assessment tool for multi-wavelength AUC experiments with UltraScan	2
Electrophoresis, a transport technology that transitioned from moving boundary method to zone method	2
Ionizable lipids in bio-inspired nanocarriers	2
Microscale Thermophoresis and additional effects measured in NanoTemper Monolith instruments	2
Molecular dynamics study of the competitive binding of hydrogen peroxide and water molecules with DNA phosphate groups	2