OOIR: Observatory of International Research

Papers

(The TQCC of Plant Molecular Biology is 8. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)

Article	Citations
Molecular regulation of starch metabolism	100
Integrative omics studies revealed synergistic link between sucrose metabolic isogenes and carbohydrates in poplar roots infected by Fusarium wilt	77
Involvement of CgHSFB1 in the regulation of self-incompatibility in ‘Shatian’ pummelo	54
Regulation of stomatal development by epidermal, subepidermal and long-distance signals	49
Why old duplicated genes are not thrown away in (paleo)polyploids? Example from the petC gene in Brassica napus	47
Chitooligosaccharide elicitor and oxylipins synergistically elevate phytoalexin production in rice	45
A deleterious Sar1c variant in rice inhibits export of seed storage proteins from the endoplasmic reticulum	43
CmERF1 acts as a positive regulator of fruits and leaves growth in melon (Cucumis melo L.)	40
Oschib1 gene encoding a GH18 chitinase confers resistance against sheath blight disease of rice caused by Rhizoctonia solani AG1-IA	38
Construing the resilience to osmotic stress using endophytic fungus in maize (Zea mays L.)	36
Correlation analysis of transcriptome and metabolomics and functional study of Galactinol synthase gene (VcGolS3) of blueberry under salt stress	36
Combined transcriptome and proteome analysis provides insights into anthocyanin accumulation in the leaves of red-leaved poplars	36
CRISPR gene editing of major domestication traits accelerating breeding for Solanaceae crops improvement	33
Chemical application improves stress resilience in plants	32
Silencing Osa-miR827 via CRISPR/Cas9 protects rice against the blast fungus Magnaporthe oryzae	31
Improving rice eating and cooking quality by coordinated expression of the major starch synthesis-related genes, SSII and Wx, in endosperm	30
BcWRKY1 confers salt sensitivity via inhibiting Reactive oxygen species scavenging	29
Signalling cascades choreographing petal cell death: implications for postharvest quality	28
Molecular-based characterization and bioengineering of Sorghum bicolor to enhance iron deficiency tolerance in iron-limiting calcareous soils	28
Bread wheat satellitome: a complex scenario in a huge genome	28
Individual lipid transfer proteins from Tanacetum parthenium show different specificity for extracellular accumulation of sesquiterpenes	27
Correction to: Crocus transcription factors CstMYB1 and CstMYB1R2 modulate apocarotenoid metabolism by regulating carotenogenic genes	26
Heat stress causes chromatin accessibility and related gene expression changes in crown tissues of barley (Hordeum vulgare)	25
Retraction Note: Overexpression of PsnSuSy1, 2 genes enhances secondary cell wall thickening, vegetative growth, and mechanical strength in transgenic tobacco	25
Heterologous expression of Halostachys caspica pathogenesis-related protein 10 increases salt and drought resistance in transgenic Arabidopsis thaliana	25

NtCycB2 negatively regulates tobacco glandular trichome formation, exudate accumulation, and aphid resistance	24
Characterization of infected process and primary mechanism in rice Acuce defense against rice blast fungus, Magnaporthe oryzae	24
A cytosol-tethered YHB variant of phytochrome B retains photomorphogenic signaling activity	24
Pseudocrossidium replicatum (Taylor) R.H. Zander is a fully desiccation-tolerant moss that expresses an inducible molecular mechanism in response to severe abiotic stress	24
Lyso-phosphatidylethanolamine triggers immunity against necrotrophs by promoting JA-signaling and ROS-homeostasis	23
Vernalization promotes bolting in sugar beet by inhibiting the transcriptional repressors of BvGI	23
Role of jasmonate signaling in rice resistance to the leaf folder Cnaphalocrocis medinalis	23
Detection of genes associated with soybean protein content using a genome-wide association study	22
Elucidating the genetic architecture controlling antioxidant status and ionic balance in barley under salt stress	22
Changes in fine structure of amylopectin and internal structures of starch granules in developing endosperms and culms caused by starch branching enzyme mutations of japonica rice	22
Elucidating the antioxidant potential of some flavanones as MAO-B inhibitors through DAM, in silico molecular docking and computational analysis	22
Transcriptomic analysis reveals the role of FOUR LIPS in response to salt stress in rice	22
A complex interplay of Gβ and Gγ proteins regulates plant growth and defence traits in the allotetraploid Brassica juncea	21
Cucumis sativus PHLOEM PROTEIN 2-A1 like gene positively regulates salt stress tolerance in cucumber seedlings	21
PpSCARECROW1 (PpSCR1) regulates leaf blade and mid-vein development in Physcomitrium patens	20
Directed evolution of diacylglycerol acyltransferases 2 promotes lipids and triglyceride accumulation	19
The role of iron nanoparticles on morpho-physiological traits and genes expression (IRT1 and CAT) in rue (Ruta graveolens)	18
Highly divergent satellitomes of two barley species of agronomic importance, Hordeum chilense and H. vulgare	18
Large-scale comparative transcriptomic analysis of temperature-responsive genes in Arabidopsis thaliana	18
Active-type starch synthase (SS) IIa from indica rice partially complements the sugary-1 phenotype in japonica rice endosperm	18
Cytonuclear coevolution in a holoparasitic plant with highly disparate organellar genomes	18
The dicing activity of DCL3 and DCL4 is negatively affected by flavonoids	18
Recent allopolyploidy alters Spartina microRNA expression in response to xenobiotic-induced stress	17
Full-length transcriptome analysis of Ophioglossum vulgatum: effects of experimentally identified chloroplast gene clusters on expression and evolutionary patterns	17
Suppressed expression of starch branching enzyme 1 and 2 increases resistant starch and amylose content and modifies amylopectin structure in cassava	16
Transcriptome responses of Arabidopsis to necrotrophic fungus Alternaria brassicae reveal pathways and candidate genes associated with resistance	16
Multi-omic applications for understanding and enhancing tropical fruit flavour	16
Genome-wide identification, stress- and hormone-responsive expression characteristics, and regulatory pattern analysis of Scutellaria baicalensis SbSPLs	16
Differential metabolic reprogramming in developing soybean embryos in response to nutritional conditions and abscisic acid	16
DELLA-GAF1 complex is involved in tissue-specific expression and gibberellin feedback regulation of GA20ox1 in Arabidopsis	16
In silico analysis of NAC gene family in the mangrove plant Avicennia marina provides clues for adaptation to intertidal habitats	16
Arabidopsis Sar1b is critical for pollen tube growth	14
Correction: Ectopic overexpression of TaHsfA5 promotes thermomorphogenesis in Arabidopsis thaliana and thermotolerance in Oryza sativa	14
A LBD transcription factor from moso bamboo, PheLBD12, regulates plant height in transgenic rice	14
Overexpression of vacuolar transporters OsVIT1 and OsVIT2 reduces cadmium accumulation in rice	14
Overexpression of nicotinamidase 3 (NIC3) gene and the exogenous application of nicotinic acid (NA) enhance drought tolerance and increase biomass in Arabidopsis	14
Heightened miR6024-NLR interactions facilitate necrotrophic pathogenesis in tomato	14
Identification of vernalization-related genes and cold memory element (CME) required for vernalization response in radish (Raphanus sativus L.)	14
A mutation in Arabidopsis SAL1 alters its in vitro activity against IP3 and delays developmental leaf senescence in association with lower ROS levels	14
Comparative transcriptome sequencing analysis to postulate the scheme of regulated leaf coloration in Perilla frutescens	14
Characterization of Cry2 genes (CRY2a and CRY2b) of B. napus and comparative analysis of BnCRY1 and BnCRY2a in regulating seedling photomorphogenesis	13
Molecular biology of chemical defenses	13
Variations and reduction of plastome are associated with the evolution of parasitism in Convolvulaceae	13
OsNAC121 regulates root development, tillering, panicle morphology, and grain filling in rice plant	13
Exploring the complexity of genome size reduction in angiosperms	13
How do emerging long-read sequencing technologies function in transforming the plant pathology research landscape?	13
Leaf rolling detection in maize under complex environments using an improved deep learning method	13
How salt stress-responsive proteins regulate plant adaptation to saline conditions	13
The GZnC1 variant from common wild rice influences grain Zn content	12
Transgenerational effects of elevated CO2 on rice photosynthesis and grain yield	12

Genome-wide identification of Arabidopsis non-AUG-initiated upstream ORFs with evolutionarily conserved regulatory sequences that control protein expression levels	12
The role of CBL–CIPK signaling in plant responses to biotic and abiotic stresses	11
Transcriptome analysis and functional validation reveal the novel role of LhCYCL in axillary bud development in hybrid Liriodendron	11
Barley young leaf chlorina, a putative pentatricopeptide repeat gene, is essential for chloroplast development in young leaves	11
Tomato leaves under stress: a comparison of stress response to mild abiotic stress between a cultivated and a wild tomato species	11
A comprehensive review of soybean RNL and TIR domain proteins	11
Modulation of the wheat transcriptome by TaZFP13D under well-watered and drought conditions	11
Transcriptomic responses of Solanum tuberosum cv. Pirol to arbuscular mycorrhiza and potato virus Y (PVY) infection	11
The dicot homolog of maize PPR103 carries a C-terminal DYW domain and may have a role in C-to-U editing of some chloroplast RNA transcripts	11
The N-terminal α2 helix element is critical for the activity of the rice transcription factor MYC2	11
Arabidopsis GELP7 functions as a plasma membrane-localized acetyl xylan esterase, and its overexpression improves saccharification efficiency	10
The interplay between cell wall integrity and cell cycle progression in plants	10
Integrative transcriptome and proteome analyses provide deep insights into the molecular mechanism of salt tolerance in Limonium bicolor	10
Genetic diversity, transcript heterogeneity and allele mining of TaSKP1-6B-4 gene variants across diverse genotypes under terminal heat stress and genome wide characterization of TaSKP1 gene family fr	10
HY5 and ABI5 transcription factors physically interact to fine tune light and ABA signaling in Arabidopsis	10
DArTseq genotyping facilitates identification of Aegilops biuncialis chromatin introgressed into bread wheat Mv9kr1	10
A de novo gene originating from the mitochondria controls floral transition in Arabidopsis thaliana	10
The Capsicum terpenoid biosynthetic module is affected by spider-mite herbivory	10
Low-dose 60Co-γ-ray irradiation promotes the growth of cucumber seedlings by inducing CsSAUR37 expression	10
Anthocyanin accumulation and transcriptional regulation in purple flowering stalk (Brassica campestris L. var. purpurea Bailey)	10
Phenylmercury stress induces root tip swelling through auxin homeostasis disruption	9
Molecular mechanism of different flower color formation of Cymbidium ensifolium	9
Enhanced growth rate under elevated CO2 conditions was observed for transgenic lines of genes identified by intraspecific variation analyses in Arabidopsis thaliana	9
Genome-wide identification of GATA transcription factor family and the effect of different light quality on the accumulation of terpenoid indole alkaloids in Uncaria rhynchophylla	9
Transcriptomic analysis provides insights into the AUXIN RESPONSE FACTOR 6-mediated repression of nicotine biosynthesis in tobacco (Nicotiana tabacum L.)	9
Chemically-induced cellular stress signals are transmitted to alternative splicing via UsnRNA levels to alter gene expression in Arabidopsis thaliana	9
Correction to: Field-transcriptome analyses reveal developmental transitions during flowering in cassava (Manihot esculenta Crantz)	9
Integrating ATAC-seq and RNA-seq to identify differentially expressed genes with chromatin-accessible changes during photosynthetic establishment in Populus leaves	9
Xylobiose treatment triggers a defense-related response and alters cell wall composition	9
A novel QTL qRYM-7H for barley yellow mosaic resistance identified by GWAS and linkage analysis	9
Evolutionary history of the mediterranean Pinus halepensis-brutia species complex using gene-resequencing and transcriptomic approaches	9
Assessing the role of REM13, REM34 and REM46 during the transition to the reproductive phase in Arabidopsis thaliana	9
The dual function of elicitors and effectors from insects: reviewing the ‘arms race’ against plant defenses	8
Correction: Genome-wide view and characterization of natural antisense transcripts in Cannabis Sativa L	8
Genome-wide identification and in-silico expression analysis of CCO gene family in sunflower (Helianthus annuus) against abiotic stress	8
Protein targeting to starch 1, a functional protein of starch biosynthesis in wheat (Triticum aestivum L.)	8
Insight into melatonin-mediated response and signaling in the regulation of plant defense under biotic stress	8
Physio-biochemical and molecular mechanisms of low nitrogen stress tolerance in peanut (Arachis hypogaea L.)	8
GATA transcription factor in common bean: A comprehensive genome-wide functional characterization, identification, and abiotic stress response evaluation	8
Characterizing serotonin biosynthesis in Setaria viridis leaves and its effect on aphids	8
Exploration of molecular mechanism of intraspecific cross-incompatibility in sweetpotato by transcriptome and metabolome analysis	8
A transient in planta editing assay identifies specific binding of the splicing regulator PTB as a prerequisite for cassette exon inclusion	8
The involvement of AtMKK1 and AtMKK3 in plant-deleterious microbial volatile compounds-induced defense responses	8
Phenylpropanoids for the control of fungal diseases of postharvest fruit	8
Regulatory mechanism of GA3 on tuber growth by DELLA-dependent pathway in yam (Dioscorea opposita)	8
TOPLESS in the regulation of plant immunity	8
Delineation of genes for a major QTL governing heat stress tolerance in chickpea	8