Plant Molecular Biology

Papers
(The median citation count of Plant Molecular Biology is 3. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)
ArticleCitations
Molecular regulation of starch metabolism100
Integrative omics studies revealed synergistic link between sucrose metabolic isogenes and carbohydrates in poplar roots infected by Fusarium wilt77
Involvement of CgHSFB1 in the regulation of self-incompatibility in ‘Shatian’ pummelo54
Regulation of stomatal development by epidermal, subepidermal and long-distance signals49
Why old duplicated genes are not thrown away in (paleo)polyploids? Example from the petC gene in Brassica napus47
Chitooligosaccharide elicitor and oxylipins synergistically elevate phytoalexin production in rice45
A deleterious Sar1c variant in rice inhibits export of seed storage proteins from the endoplasmic reticulum43
CmERF1 acts as a positive regulator of fruits and leaves growth in melon (Cucumis melo L.)40
Oschib1 gene encoding a GH18 chitinase confers resistance against sheath blight disease of rice caused by Rhizoctonia solani AG1-IA38
Correlation analysis of transcriptome and metabolomics and functional study of Galactinol synthase gene (VcGolS3) of blueberry under salt stress36
Combined transcriptome and proteome analysis provides insights into anthocyanin accumulation in the leaves of red-leaved poplars36
Construing the resilience to osmotic stress using endophytic fungus in maize (Zea mays L.)36
CRISPR gene editing of major domestication traits accelerating breeding for Solanaceae crops improvement33
Chemical application improves stress resilience in plants32
Silencing Osa-miR827 via CRISPR/Cas9 protects rice against the blast fungus Magnaporthe oryzae31
Improving rice eating and cooking quality by coordinated expression of the major starch synthesis-related genes, SSII and Wx, in endosperm30
BcWRKY1 confers salt sensitivity via inhibiting Reactive oxygen species scavenging29
Signalling cascades choreographing petal cell death: implications for postharvest quality28
Molecular-based characterization and bioengineering of Sorghum bicolor to enhance iron deficiency tolerance in iron-limiting calcareous soils28
Bread wheat satellitome: a complex scenario in a huge genome28
Individual lipid transfer proteins from Tanacetum parthenium show different specificity for extracellular accumulation of sesquiterpenes27
Correction to: Crocus transcription factors CstMYB1 and CstMYB1R2 modulate apocarotenoid metabolism by regulating carotenogenic genes26
Heat stress causes chromatin accessibility and related gene expression changes in crown tissues of barley (Hordeum vulgare)25
Retraction Note: Overexpression of PsnSuSy1, 2 genes enhances secondary cell wall thickening, vegetative growth, and mechanical strength in transgenic tobacco25
Heterologous expression of Halostachys caspica pathogenesis-related protein 10 increases salt and drought resistance in transgenic Arabidopsis thaliana25
NtCycB2 negatively regulates tobacco glandular trichome formation, exudate accumulation, and aphid resistance24
Characterization of infected process and primary mechanism in rice Acuce defense against rice blast fungus, Magnaporthe oryzae24
A cytosol-tethered YHB variant of phytochrome B retains photomorphogenic signaling activity24
Pseudocrossidium replicatum (Taylor) R.H. Zander is a fully desiccation-tolerant moss that expresses an inducible molecular mechanism in response to severe abiotic stress24
Vernalization promotes bolting in sugar beet by inhibiting the transcriptional repressors of BvGI23
Role of jasmonate signaling in rice resistance to the leaf folder Cnaphalocrocis medinalis23
Lyso-phosphatidylethanolamine triggers immunity against necrotrophs by promoting JA-signaling and ROS-homeostasis23
Elucidating the genetic architecture controlling antioxidant status and ionic balance in barley under salt stress22
Changes in fine structure of amylopectin and internal structures of starch granules in developing endosperms and culms caused by starch branching enzyme mutations of japonica rice22
Elucidating the antioxidant potential of some flavanones as MAO-B inhibitors through DAM, in silico molecular docking and computational analysis22
Transcriptomic analysis reveals the role of FOUR LIPS in response to salt stress in rice22
Detection of genes associated with soybean protein content using a genome-wide association study22
Cucumis sativus PHLOEM PROTEIN 2-A1 like gene positively regulates salt stress tolerance in cucumber seedlings21
A complex interplay of Gβ and Gγ proteins regulates plant growth and defence traits in the allotetraploid Brassica juncea21
PpSCARECROW1 (PpSCR1) regulates leaf blade and mid-vein development in Physcomitrium patens20
Directed evolution of diacylglycerol acyltransferases 2 promotes lipids and triglyceride accumulation19
Large-scale comparative transcriptomic analysis of temperature-responsive genes in Arabidopsis thaliana18
Active-type starch synthase (SS) IIa from indica rice partially complements the sugary-1 phenotype in japonica rice endosperm18
Cytonuclear coevolution in a holoparasitic plant with highly disparate organellar genomes18
The dicing activity of DCL3 and DCL4 is negatively affected by flavonoids18
The role of iron nanoparticles on morpho-physiological traits and genes expression (IRT1 and CAT) in rue (Ruta graveolens)18
Highly divergent satellitomes of two barley species of agronomic importance, Hordeum chilense and H. vulgare18
Recent allopolyploidy alters Spartina microRNA expression in response to xenobiotic-induced stress17
Full-length transcriptome analysis of Ophioglossum vulgatum: effects of experimentally identified chloroplast gene clusters on expression and evolutionary patterns17
Suppressed expression of starch branching enzyme 1 and 2 increases resistant starch and amylose content and modifies amylopectin structure in cassava16
Transcriptome responses of Arabidopsis to necrotrophic fungus Alternaria brassicae reveal pathways and candidate genes associated with resistance16
Multi-omic applications for understanding and enhancing tropical fruit flavour16
Genome-wide identification, stress- and hormone-responsive expression characteristics, and regulatory pattern analysis of Scutellaria baicalensis SbSPLs16
Differential metabolic reprogramming in developing soybean embryos in response to nutritional conditions and abscisic acid16
DELLA-GAF1 complex is involved in tissue-specific expression and gibberellin feedback regulation of GA20ox1 in Arabidopsis16
In silico analysis of NAC gene family in the mangrove plant Avicennia marina provides clues for adaptation to intertidal habitats16
Correction: Ectopic overexpression of TaHsfA5 promotes thermomorphogenesis in Arabidopsis thaliana and thermotolerance in Oryza sativa14
A LBD transcription factor from moso bamboo, PheLBD12, regulates plant height in transgenic rice14
Overexpression of vacuolar transporters OsVIT1 and OsVIT2 reduces cadmium accumulation in rice14
Overexpression of nicotinamidase 3 (NIC3) gene and the exogenous application of nicotinic acid (NA) enhance drought tolerance and increase biomass in Arabidopsis14
Heightened miR6024-NLR interactions facilitate necrotrophic pathogenesis in tomato14
Identification of vernalization-related genes and cold memory element (CME) required for vernalization response in radish (Raphanus sativus L.)14
A mutation in Arabidopsis SAL1 alters its in vitro activity against IP3 and delays developmental leaf senescence in association with lower ROS levels14
Comparative transcriptome sequencing analysis to postulate the scheme of regulated leaf coloration in Perilla frutescens14
Arabidopsis Sar1b is critical for pollen tube growth14
OsNAC121 regulates root development, tillering, panicle morphology, and grain filling in rice plant13
Exploring the complexity of genome size reduction in angiosperms13
How do emerging long-read sequencing technologies function in transforming the plant pathology research landscape?13
Leaf rolling detection in maize under complex environments using an improved deep learning method13
How salt stress-responsive proteins regulate plant adaptation to saline conditions13
Characterization of Cry2 genes (CRY2a and CRY2b) of B. napus and comparative analysis of BnCRY1 and BnCRY2a in regulating seedling photomorphogenesis13
Molecular biology of chemical defenses13
Variations and reduction of plastome are associated with the evolution of parasitism in Convolvulaceae13
Transgenerational effects of elevated CO2 on rice photosynthesis and grain yield12
Genome-wide identification of Arabidopsis non-AUG-initiated upstream ORFs with evolutionarily conserved regulatory sequences that control protein expression levels12
The GZnC1 variant from common wild rice influences grain Zn content12
Transcriptome analysis and functional validation reveal the novel role of LhCYCL in axillary bud development in hybrid Liriodendron11
Barley young leaf chlorina, a putative pentatricopeptide repeat gene, is essential for chloroplast development in young leaves11
Tomato leaves under stress: a comparison of stress response to mild abiotic stress between a cultivated and a wild tomato species11
A comprehensive review of soybean RNL and TIR domain proteins11
Modulation of the wheat transcriptome by TaZFP13D under well-watered and drought conditions11
Transcriptomic responses of Solanum tuberosum cv. Pirol to arbuscular mycorrhiza and potato virus Y (PVY) infection11
The dicot homolog of maize PPR103 carries a C-terminal DYW domain and may have a role in C-to-U editing of some chloroplast RNA transcripts11
The N-terminal α2 helix element is critical for the activity of the rice transcription factor MYC211
The role of CBL–CIPK signaling in plant responses to biotic and abiotic stresses11
The Capsicum terpenoid biosynthetic module is affected by spider-mite herbivory10
Integrative transcriptome and proteome analyses provide deep insights into the molecular mechanism of salt tolerance in Limonium bicolor10
Low-dose 60Co-γ-ray irradiation promotes the growth of cucumber seedlings by inducing CsSAUR37 expression10
Arabidopsis GELP7 functions as a plasma membrane-localized acetyl xylan esterase, and its overexpression improves saccharification efficiency10
A de novo gene originating from the mitochondria controls floral transition in Arabidopsis thaliana10
The interplay between cell wall integrity and cell cycle progression in plants10
Genetic diversity, transcript heterogeneity and allele mining of TaSKP1-6B-4 gene variants across diverse genotypes under terminal heat stress and genome wide characterization of TaSKP1 gene family fr10
Anthocyanin accumulation and transcriptional regulation in purple flowering stalk (Brassica campestris L. var. purpurea Bailey)10
HY5 and ABI5 transcription factors physically interact to fine tune light and ABA signaling in Arabidopsis10
DArTseq genotyping facilitates identification of Aegilops biuncialis chromatin introgressed into bread wheat Mv9kr110
Integrating ATAC-seq and RNA-seq to identify differentially expressed genes with chromatin-accessible changes during photosynthetic establishment in Populus leaves9
Xylobiose treatment triggers a defense-related response and alters cell wall composition9
A novel QTL qRYM-7H for barley yellow mosaic resistance identified by GWAS and linkage analysis9
Evolutionary history of the mediterranean Pinus halepensis-brutia species complex using gene-resequencing and transcriptomic approaches9
Assessing the role of REM13, REM34 and REM46 during the transition to the reproductive phase in Arabidopsis thaliana9
Phenylmercury stress induces root tip swelling through auxin homeostasis disruption9
Molecular mechanism of different flower color formation of Cymbidium ensifolium9
Enhanced growth rate under elevated CO2 conditions was observed for transgenic lines of genes identified by intraspecific variation analyses in Arabidopsis thaliana9
Genome-wide identification of GATA transcription factor family and the effect of different light quality on the accumulation of terpenoid indole alkaloids in Uncaria rhynchophylla9
Transcriptomic analysis provides insights into the AUXIN RESPONSE FACTOR 6-mediated repression of nicotine biosynthesis in tobacco (Nicotiana tabacum L.)9
Chemically-induced cellular stress signals are transmitted to alternative splicing via UsnRNA levels to alter gene expression in Arabidopsis thaliana9
Correction to: Field-transcriptome analyses reveal developmental transitions during flowering in cassava (Manihot esculenta Crantz)9
The involvement of AtMKK1 and AtMKK3 in plant-deleterious microbial volatile compounds-induced defense responses8
Phenylpropanoids for the control of fungal diseases of postharvest fruit8
Regulatory mechanism of GA3 on tuber growth by DELLA-dependent pathway in yam (Dioscorea opposita)8
TOPLESS in the regulation of plant immunity8
Delineation of genes for a major QTL governing heat stress tolerance in chickpea8
The dual function of elicitors and effectors from insects: reviewing the ‘arms race’ against plant defenses8
Correction: Genome-wide view and characterization of natural antisense transcripts in Cannabis Sativa L8
Genome-wide identification and in-silico expression analysis of CCO gene family in sunflower (Helianthus annuus) against abiotic stress8
Protein targeting to starch 1, a functional protein of starch biosynthesis in wheat (Triticum aestivum L.)8
Insight into melatonin-mediated response and signaling in the regulation of plant defense under biotic stress8
Physio-biochemical and molecular mechanisms of low nitrogen stress tolerance in peanut (Arachis hypogaea L.)8
GATA transcription factor in common bean: A comprehensive genome-wide functional characterization, identification, and abiotic stress response evaluation8
Characterizing serotonin biosynthesis in Setaria viridis leaves and its effect on aphids8
Exploration of molecular mechanism of intraspecific cross-incompatibility in sweetpotato by transcriptome and metabolome analysis8
A transient in planta editing assay identifies specific binding of the splicing regulator PTB as a prerequisite for cassette exon inclusion8
Completing the TRB family: newly characterized members show ancient evolutionary origins and distinct localization, yet similar interactions7
On the cluster structure of amylopectin7
The cotton pectin methyl esterase gene GhPME21 functions in microspore development and fertility in Gossypium hirsutum L.7
ACRE, a class of AP2/ERF transcription factors, activates the expression of sweet potato ß-amylase and sporamin genes through the sugar-responsible element CMSRE-17
The enzymatic properties of Arabidopsis thaliana DNA polymerase λ suggest a role in base excision repair7
Disrupted H2 synthesis combined with methyl viologen treatment inhibits photosynthetic electron flow to synergistically enhance glycogen accumulation in the cyanobacterium Synechocystis sp. PCC 68037
NnMTP10 from Nelumbo nucifera acts as a transporter mediating manganese and iron efflux7
Construction of two regulatory networks related to salt stress and lignocellulosic synthesis under salt stress based on a Populus davidiana × P. bolleana transcriptome analysis7
Novel insight into anthocyanin metabolism and molecular characterization of its key regulators in Camellia sasanqua7
From source to sink: mechanistic insight of photoassimilates synthesis and partitioning under high temperature and elevated [CO2]7
Deep learning modeling of RNA ac4C deposition reveals the importance of plant alternative splicing7
Opportunities and challenges with CRISPR-Cas mediated homologous recombination based precise editing in plants and animals7
Functional investigation of five R2R3-MYB transcription factors associated with wood development in Eucalyptus using DAP-seq-ML7
Light regulates seed dormancy through FHY3-mediated activation of ACC OXIDASE 1 in Arabidopsis7
Modulation of GmFAD3 expression alters abiotic stress responses in soybean7
Coordination between two cis-elements of WRKY33, bound by the same transcription factor, confers humid adaption in Arabidopsis thaliana7
Deciphering physiological and transcriptional mechanisms of maize seed germination7
Five amino acid mismatches in the zinc-finger domains of Cellulose Synthase 5 and Cellulose Synthase 6 cooperatively modulate their functional properties by controlling homodimerization in Arabidopsis7
Time-series transcriptome analysis reveals the cascade mechanism of biological processes following the perturbation of the MVA pathway in Salvia miltiorrhiza6
Plant growth Enhancement in Colchicine-Treated Tomato Seeds without Polyploidy Induction6
Relative importance of branching enzyme isoforms in determining starch fine structure and physicochemical properties of indica rice6
Ethylene response factor ERF022 is involved in regulating Arabidopsis root growth6
A simple and efficient TALEN system for genome editing in plants6
Metabolite and transcriptome reveal the lipid-associated key components and genes regulated by BoORP3a in ornamental kale6
Deciphering the role of SPL12 and AGL6 from a genetic module that functions in nodulation and root regeneration in Medicago sativa6
Rapid sequence evolution is associated with genetic incompatibilities in the plastid Clp complex6
A smart multiplexed microRNA biosensor based on FRET for the prediction of mechanical damage and storage period of strawberry fruits6
Identification of the glutamine synthetase (GS) gene family in four wheat species and functional analysis of Ta4D.GSe in Arabidopsis thaliana6
Genetic divergence in transcriptional regulators of defense metabolism: insight into plant domestication and improvement6
l-Lactate dehydrogenase from Cyanidioschyzon merolae shows high catalytic efficiency for pyruvate reduction and is inhibited by ATP6
OsLOX1 positively regulates seed vigor and drought tolerance in rice6
Structural and functional analysis of plant ELO-like elongase for fatty acid elongation6
CBM20CP, a novel functional protein of starch metabolism in green algae6
A type-2C protein phosphatase (GhDRP1) participates in cotton (Gossypium hirsutum) response to drought stress6
Ethanol treatment enhances drought stress avoidance in cassava (Manihot esculenta Crantz)6
Phytochelatin-mediated metal detoxification pathway is crucial for an organomercurial phenylmercury tolerance in Arabidopsis6
Identification and characterization of GLYCEROLIPASE A1 for wound-triggered JA biosynthesis in Nicotiana benthamiana leaves6
Developmental pleiotropy of SDP1 from seedling to mature stages in B. napus5
Life, death and resurrection of plant GPCRs5
Identification of tomato F-box proteins functioning in phenylpropanoid metabolism5
Phytol recycling: essential, yet not limiting for tomato fruit tocopherol accumulation under normal growing conditions5
Cosuppression of AtGELP22 and AtGELP23, two ubiquitinated target proteins of RING E3 ligase AtAIRP5, increases tolerance to drought stress in Arabidopsis5
Frontiers in plant RNA research in ICAR2023: from lab to innovative agriculture5
Citrate synthase from Cyanidioschyzon merolae exhibits high oxaloacetate and acetyl-CoA catalytic efficiency5
Transcriptome and DNA methylome analyses provide insight into the heterosis in flag leaf of inter-subspecific hybrid rice5
CIN-like TCP13 is essential for plant growth regulation under dehydration stress5
The R2R3-MYB transcription factor ZeMYB32 negatively regulates anthocyanin biosynthesis in Zinnia elegans5
Editing of the starch branching enzyme gene SBE2 generates high-amylose storage roots in cassava5
SbCASP-LP1C1 improves salt exclusion by enhancing the root apoplastic barrier5
How it all begins: molecular players of the early graviresponse in the non-elongating part of flax stem5
The structural components of the Azotobacter vinelandii iron-only nitrogenase, AnfDKG, form a protein complex within the plant mitochondrial matrix5
GhBES1 mediates brassinosteroid regulation of leaf size by activating expression of GhEXO2 in cotton (Gossypium hirsutum)5
Correction to: CIN‑like TCP13 is essential for plant growth regulation under dehydration stress5
Metabolomic profiling of wheat genotypes resistant and susceptible to root-lesion nematode Pratylenchus thornei4
GmWRKY17-mediated transcriptional regulation of GmDREB1D and GmABA2 controls drought tolerance in soybean4
WRKY transcription factor MdWRKY71 regulates flowering time in apple4
Ca2+-responsive phospholipid-binding BONZAI genes confer a novel role for cotton resistance to Verticillium wilt4
Genome-wide characterization of the TALE homeodomain family and the KNOX-BLH interaction network in tomato4
Characterization of CYP82 genes involved in the biosynthesis of structurally diverse benzylisoquinoline alkaloids in Corydalis yanhusuo4
Allelic variation for alpha-Glucan Water Dikinase is associated with starch phosphate content in tetraploid potato4
Functional and regulatory diversity of homeobox-leucine zipper transcription factors BnaHB6 under dehydration and salt stress in Brassica napus L.4
PAP1 and PAP7 are required for association of plastid-encoded RNA polymerase with DNA4
Acylsugars protect Nicotiana benthamiana against insect herbivory and desiccation4
Moving forward to understand the alteration of physiological mechanism by seed priming with different halo-agents under salt stress4
Overexpression of transcription factor FaMYB63 enhances salt tolerance by directly binding to the SOS1 promoter in Arabidopsis thaliana4
Transcriptional loss of domestication-driven cytoskeletal GhPRF1 gene causes defective floral and fiber development in cotton (Gossypium)4
Interpreting the complexities of the plastid genome in dinoflagellates: a mini-review of recent advances4
Modelling cassava production and pest management under biotic and abiotic constraints4
OsIPK1 frameshift mutations disturb phosphorus homeostasis and impair starch synthesis during grain filling in rice4
Using k-mer embeddings learned from a Skip-gram based neural network for building a cross-species DNA N6-methyladenine site prediction model4
The rice wound-inducible transcription factor RERJ1 sharing same signal transduction pathway with OsMYC2 is necessary for defense response to herbivory and bacterial blight4
Identification and transcriptome data analysis of ARF family genes in five Orchidaceae species4
Multiple pathways mediate chloroplast singlet oxygen stress signaling4
PseAraUbi: predicting arabidopsis ubiquitination sites by incorporating the physico-chemical and structural features4
Maize auxin response factor ZmARF1 confers multiple abiotic stresses resistances in transgenic Arabidopsis4
Transcriptional response of Arabidopsis thaliana’s root-tip to spaceflight4
Tomato miR398 knockout disrupts ROS dynamics during stress conferring heat tolerance but hypersusceptibility to necrotroph infection4
Mutation in BEIIb mitigates the negative effect of the mutation in ISA1 on grain filling and amyloplast formation in rice4
Proteomic profile of the germinating seeds reveals enhanced seedling growth in Arabidopsis rpp1a mutant4
miR397-LACs mediated cadmium stress tolerance in Arabidopsis thaliana3
Creating a zero amylose barley with high soluble sugar content by genome editing3
MoSDT1 triggers defense response through modulating phosphorylated proteins in rice3
Functional annotation of proteins in Catharanthus roseus shoot cultures under biogenic zinc nanotreatment3
The lincRNA XH123 is involved in cotton cold-stress regulation3
Cutting-edge computational approaches to plant phenotyping3
Genome-wide analysis of the SPL family in Zanthoxylum armatum and ZaSPL21 promotes flowering and improves salt tolerance in transgenic Nicotiana benthamiana3
The CBM48 domain-containing protein FLO6 regulates starch synthesis by interacting with SSIVb and GBSS in rice3
The phosphorylated pathway of serine biosynthesis is crucial for indolic glucosinolate biosynthesis and plant growth promotion conferred by the root endophyte Colletotrichum tofieldiae3
DUO1 Activated Zinc Finger (AtDAZ) protein role in the generative cell body morphogenesis3
Effect of ACGT motif in spatiotemporal regulation of AtAVT6D, which improves tolerance to osmotic stress and nitrogen-starvation3
IPD3, a master regulator of arbuscular mycorrhizal symbiosis, affects genes for immunity and metabolism of non-host Arabidopsis when restored long after its evolutionary loss3
Biological function research of Fusarium oxysporum f. sp. cubense inducible banana long noncoding RNA Malnc2310 in Arabidopsis3
The interaction between exogenous IBA with sucrose, light and ventilation alters the expression of ARFs and Aux/IAA genes in Carica papaya plantlets3
Multiple NADPH-cytochrome P450 reductases from Lycoris radiata involved in Amaryllidaceae alkaloids biosynthesis3
Promoter profiling of Arabidopsis amino acid transporters: clues for improving crops3
Identification of QTLs and a putative candidate gene involved in rhizome enlargement of Asian lotus (Nelumbo nucifera)3
Virtual staining from bright-field microscopy for label-free quantitative analysis of plant cell structures3
Molecular biology of mosses3
Structure, function, and evolution of plant ADP-glucose pyrophosphorylase3
Centromere sequence-independent but biased loading of subgenome-specific CENH3 variants in allopolyploid Arabidopsis suecica3
Pyruvate kinase 2 from Synechocystis sp. PCC 6803 increased substrate affinity via glucose-6-phosphate and ribose-5-phosphate for phosphoenolpyruvate consumption3
Comparative transcriptomic analysis of heterotic maize development during kernel filling3
Molecular mechanisms of plant productivity enhancement by nano fertilizers for sustainable agriculture3
Photosynthetic traits of Australian wild rice (Oryza australiensis) confer tolerance to extreme daytime temperatures3
Transcriptomic analysis of hub genes regulating albinism in light- and temperature-sensitive albino tea cultivars ‘Zhonghuang 1’ and ‘Zhonghuang 2’3
The complete plastid genome sequence of the enigmatic moss, Takakia lepidozioides (Takakiopsida, Bryophyta): evolutionary perspectives on the largest collection of genes in mosses and the intensive RN3
Methylomes as key features for predicting recombination in some plant species3
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