Plant Molecular Biology

Article	Citations
GmNAC06, a NAC domain transcription factor enhances salt stress tolerance in soybean	106
sgRNACNN: identifying sgRNA on-target activity in four crops using ensembles of convolutional neural networks	89
Bioregulators: unlocking their potential role in regulation of the plant oxidative defense system	78
Different regulatory mechanisms of plant hormones in the ripening of climacteric and non-climacteric fruits: a review	62
Insight into melatonin-mediated response and signaling in the regulation of plant defense under biotic stress	58
The interplay between ABA/ethylene and NAC TFs in tomato fruit ripening: a review	57
The trihelix transcription factor OsGTγ-2 is involved adaption to salt stress in rice	52
Development of multiplex genome editing toolkits for citrus with high efficacy in biallelic and homozygous mutations	52
Lignin synthesized by CmCAD2 and CmCAD3 in oriental melon (Cucumis melo L.) seedlings contributes to drought tolerance	45
Small grain and semi-dwarf 3, a WRKY transcription factor, negatively regulates plant height and grain size by stabilizing SLR1 expression in rice	40
The R2R3-MYB transcription factor MtMYB134 orchestrates flavonol biosynthesis in Medicago truncatula	37
A novel, major, and validated QTL for the effective tiller number located on chromosome arm 1BL in bread wheat	33
Comparative transcriptome analysis reveals the genes and pathways involved in terminal drought tolerance in pearl millet	33
The interaction of MYB, bHLH and WD40 transcription factors in red pear (Pyrus pyrifolia) peel	31
Class I TCP proteins TCP14 and TCP15 are required for elongation and gene expression responses to auxin	31
Genome-wide association analysis reveals new insights into the genetic architecture of defensive, agro-morphological and quality-related traits in cassava	29
From source to sink: mechanistic insight of photoassimilates synthesis and partitioning under high temperature and elevated [CO2]	29
Intact salicylic acid signalling is required for potato defence against the necrotrophic fungus Alternaria solani	28
Reproductive tissues-specific meta-QTLs and candidate genes for development of heat-tolerant rice cultivars	28
How salt stress-responsive proteins regulate plant adaptation to saline conditions	28
DNA barcoding of Oryza: conventional, specific, and super barcodes	28
Improving rice eating and cooking quality by coordinated expression of the major starch synthesis-related genes, SSII and Wx, in endosperm	27
Novel insights into the calcium action in cherry fruit development revealed by high-throughput mapping	27
Understanding the molecular mechanism of anther development under abiotic stresses	27
The influence of endophytes on rice fitness under environmental stresses	26

OsJAZ9 overexpression modulates jasmonic acid biosynthesis and potassium deficiency responses in rice	26
Three novel transcription factors involved in cannabinoid biosynthesis in Cannabis sativa L.	26
The core regulatory networks and hub genes regulating flower development in Chrysanthemum morifolium	26
Fundamental mechanisms of the stem cell regulation in land plants: lesson from shoot apical cells in bryophytes	25
Host-induced silencing of the Colletotrichum gloeosporioides conidial morphology 1 gene (CgCOM1) confers resistance against Anthracnose disease in chilli and tomato	24
Phytohormone biosynthesis and signaling pathways of mosses	24
CAX3 (cation/proton exchanger) mediates a Cd tolerance by decreasing ROS through Ca elevation in Arabidopsis	24
Genome-wide identification and characterization of long non-coding RNAs involved in flag leaf senescence of rice	24
The 3-ketoacyl-CoA synthase WFL is involved in lateral organ development and cuticular wax synthesis in Medicago truncatula	24
Cell wall integrity regulation across plant species	23
Os4BGlu14, a monolignol β-Glucosidase, negatively affects seed longevity by influencing primary metabolism in rice	23
Structure, function, and evolution of plant ADP-glucose pyrophosphorylase	23
Multichromosomal structure and foreign tracts in the Ombrophytum subterraneum (Balanophoraceae) mitochondrial genome	23
Transcriptome sequencing and metabolite profiling analyses provide comprehensive insight into molecular mechanisms of flower development in Dendrobium officinale (Orchidaceae)	23
The Ca2+ sensor proteins CML37 and CML42 antagonistically regulate plant stress responses by altering phytohormone signals	23
Integrative omics approaches revealed a crosstalk among phytohormones during tuberous root development in cassava	23
Two CYP71AJ enzymes function as psoralen synthase and angelicin synthase in the biosynthesis of furanocoumarins in Peucedanum praeruptorum Dunn	23
StCaM2, a calcium binding protein, alleviates negative effects of salinity and drought stress in tobacco	23
Network aggregation improves gene function prediction of grapevine gene co-expression networks	22
A coumarin exudation pathway mitigates arbuscular mycorrhizal incompatibility in Arabidopsis thaliana	22
SiMADS34, an E-class MADS-box transcription factor, regulates inflorescence architecture and grain yield in Setaria italica	22
Applications of nanobodies in plant science and biotechnology	21
OsNAC109 regulates senescence, growth and development by altering the expression of senescence- and phytohormone-associated genes in rice	21
FtMYB18 acts as a negative regulator of anthocyanin/proanthocyanidin biosynthesis in Tartary buckwheat	21
The CBM48 domain-containing protein FLO6 regulates starch synthesis by interacting with SSIVb and GBSS in rice	20
The lincRNA XH123 is involved in cotton cold-stress regulation	20
Arabidopsis FAX1 mediated fatty acid export is required for the transcriptional regulation of anther development and pollen wall formation	20
On the cluster structure of amylopectin	20
WRKY22 and WRKY25 transcription factors are positive regulators of defense responses in Nicotiana benthamiana	20
E3 ligase, the Oryza sativa salt-induced RING finger protein 4 (OsSIRP4), negatively regulates salt stress responses via degradation of the OsPEX11-1 protein	19
Comparative proteomics reveals new insights into the endosperm responses to drought, salinity and submergence in germinating wheat seeds	19
Transcriptional profiling reveals conserved and species-specific plant defense responses during the interaction of Physcomitrium patens with Botrytis cinerea	19
The rice wound-inducible transcription factor RERJ1 sharing same signal transduction pathway with OsMYC2 is necessary for defense response to herbivory and bacterial blight	19
Transcriptional and metabolite analysis reveal a shift in direct and indirect defences in response to spider-mite infestation in cucumber (Cucumis sativus)	19
Ethephon induces coordinated ripening acceleration and divergent coloration responses in fig (Ficus carica L.) flowers and receptacles	18
The dual function of elicitors and effectors from insects: reviewing the ‘arms race’ against plant defenses	18
Interplay of phytohormones facilitate sorghum tolerance to aphids	18
Rice OVATE family protein 6 regulates leaf angle by modulating secondary cell wall biosynthesis	18
Cassava mosaic disease and its management in Southeast Asia	17
Genome-wide identification and classification of Lipoxygenase gene family and their roles in sorghum-aphid interaction	17
HY5 and ABI5 transcription factors physically interact to fine tune light and ABA signaling in Arabidopsis	17
Two B-box domain proteins, BBX28 and BBX29, regulate flowering time at low ambient temperature in Arabidopsis	17
A CCR4-associated factor 1, OsCAF1B, confers tolerance of low-temperature stress to rice seedlings	17
Root engineering in maize by increasing cytokinin degradation causes enhanced root growth and leaf mineral enrichment	17
OsPUB41, a U-box E3 ubiquitin ligase, acts as a negative regulator of drought stress response in rice (Oryza Sativa L.)	17
Heightened miR6024-NLR interactions facilitate necrotrophic pathogenesis in tomato	17
Acylsugars protect Nicotiana benthamiana against insect herbivory and desiccation	17
Cyanidin based anthocyanin biosynthesis in orange carrot is restored by expression of AmRosea1 and AmDelila, MYB and bHLH transcription factors	16
Elucidating the functional role of heat stress transcription factor A6b (TaHsfA6b) in linking heat stress response and the unfolded protein response in wheat	16
Plant responses to high temperature: a view from pre-mRNA alternative splicing	16

Decoding the wheat awn transcriptome and overexpressing TaRca1β in rice for heat stress tolerance	16
T-DNA regions from 350 Agrobacterium genomes: maps and phylogeny	15
A type-2C protein phosphatase (GhDRP1) participates in cotton (Gossypium hirsutum) response to drought stress	15
Revealing floral metabolite network in tuberose that underpins scent volatiles synthesis, storage and emission	15
The sugarcane ShMYB78 transcription factor activates suberin biosynthesis in Nicotiana benthamiana	15
CLE2 regulates light-dependent carbohydrate metabolism in Arabidopsis shoots	15
CIN-like TCP13 is essential for plant growth regulation under dehydration stress	15
Molecular changes in Mesembryanthemum crystallinum guard cells underlying the C3 to CAM transition	15
High-LD SNP markers exhibiting pleiotropic effects on salt tolerance at germination and seedlings stages in spring wheat	15
Insight into early diversification of leucine-rich repeat receptor-like kinases provided by the sequenced moss and hornwort genomes	15
miR164-targeted TaPSK5 encodes a phytosulfokine precursor that regulates root growth and yield traits in common wheat (Triticum aestivum L.)	14
Genome-wide characterization of the TALE homeodomain family and the KNOX-BLH interaction network in tomato	14
Overexpression of nicotinamidase 3 (NIC3) gene and the exogenous application of nicotinic acid (NA) enhance drought tolerance and increase biomass in Arabidopsis	14
Integrative transcriptome and proteome analyses provide deep insights into the molecular mechanism of salt tolerance in Limonium bicolor	14
Rice-specific Argonaute 17 controls reproductive growth and yield-associated phenotypes	14
Plant-specific Dof transcription factors VASCULAR-RELATED DOF1 and VASCULAR-RELATED DOF2 regulate vascular cell differentiation and lignin biosynthesis in Arabidopsis	14
Phylogenetic analysis of plant multi-domain SEC14-like phosphatidylinositol transfer proteins and structure–function properties of PATELLIN2	13
Supportive role of the Na+ transporter CmHKT1;1 from Cucumis melo in transgenic Arabidopsis salt tolerance through improved K+/Na+ balance	13
Potent inhibition of TCP transcription factors by miR319 ensures proper root growth in Arabidopsis	13
Plastome sequences of the subgenus Passiflora reveal highly divergent genes and specific evolutionary features	13
Knockouts of a late flowering gene via CRISPR–Cas9 confer early maturity in rice at multiple field locations	13
Structural insights into Arabidopsis ethylene response factor 96 with an extended N-terminal binding to GCC box	13
Optimum root zone temperature of photosynthesis and plant growth depends on air temperature in lettuce plants	13
Defects in the rice aconitase-encoding OsACO1 gene alter iron homeostasis	13
Crocus transcription factors CstMYB1 and CstMYB1R2 modulate apocarotenoid metabolism by regulating carotenogenic genes	12
PpGRAS12 acts as a positive regulator of meristem formation in Physcomitrium patens	12
Field transcriptome analysis reveals a molecular mechanism for cassava-flowering in a mountainous environment in Southeast Asia	12
NtCycB2 negatively regulates tobacco glandular trichome formation, exudate accumulation, and aphid resistance	12
GmNAP1 is essential for trichome and leaf epidermal cell development in soybean	12
Regulatory mechanism of GA3 on tuber growth by DELLA-dependent pathway in yam (Dioscorea opposita)	12
TPST is involved in fructose regulation of primary root growth in Arabidopsis thaliana	12
GSM2, a transaldolase, contributes to reactive oxygen species homeostasis in Arabidopsis	12
Transcriptome analysis of Eucalyptus grandis genotypes reveals constitutive overexpression of genes related to rust (Austropuccinia psidii) resistance	12
Editing of the starch branching enzyme gene SBE2 generates high-amylose storage roots in cassava	12
The reconstruction and biochemical characterization of ancestral genes furnish insights into the evolution of terpene synthase function in the Poaceae	11
Role of jasmonate signaling in rice resistance to the leaf folder Cnaphalocrocis medinalis	11
Cassava shrunken-2 homolog MeAPL3 determines storage root starch and dry matter content and modulates storage root postharvest physiological deterioration	11
Plastid genome evolution in Amazonian açaí palm (Euterpe oleracea Mart.) and Atlantic forest açaí palm (Euterpe edulis Mart.)	11
Comparative analysis of the transcriptome, methylome, and metabolome during pollen abortion of a seedless citrus mutant	11
Opportunities and challenges with CRISPR-Cas mediated homologous recombination based precise editing in plants and animals	11
Molecular response and evolution of plant anion transport systems to abiotic stress	11
Role of ethylene in the regulatory mechanism underlying the abortion of ovules after fertilization in Xanthoceras sorbifolium	11
Molecular and biochemical characterization of two 4-coumarate: CoA ligase genes in tea plant (Camellia sinensis)	11
Tomato leaves under stress: a comparison of stress response to mild abiotic stress between a cultivated and a wild tomato species	11
Citrus NIP5;1 aquaporin regulates cell membrane water permeability and alters PIPs plasma membrane localization	11
(Z)-3-Hexen-1-ol accumulation enhances hyperosmotic stress tolerance in Camellia sinensis	11
Chitooligosaccharide elicitor and oxylipins synergistically elevate phytoalexin production in rice	11
Biochemical characterization of ClpB3, a chloroplastic disaggregase from Arabidopsis thaliana	10
Multiplex CRISPR-Cas9 mutagenesis of the phytochrome gene family in Physcomitrium (Physcomitrella) patens	10
SUPPRESSOR OF GAMMA RESPONSE 1 acts as a regulator coordinating crosstalk between DNA damage response and immune response in Arabidopsis thaliana	10
Combined transcriptome and proteome analysis provides insights into anthocyanin accumulation in the leaves of red-leaved poplars	10
CmMYB9a activates floral coloration by positively regulating anthocyanin biosynthesis in chrysanthemum	10
Relative importance of branching enzyme isoforms in determining starch fine structure and physicochemical properties of indica rice	10
Genome-wide identification of WD40 genes reveals a functional diversification of COP1-like genes in Rosaceae	10
Double mutation of two homologous genes YL1 and YL2 results in a leaf yellowing phenotype in soybean [Glycine max (L.) Merr]	10
Nod factor perception: an integrative view of molecular communication during legume symbiosis	10
TOPLESS in the regulation of plant immunity	10
Quantitative cell biology of tip growth in moss	10
A histone deacetylase, GhHDT4D, is positively involved in cotton response to drought stress	10
Analysis of mitochondrial recombination in the male sterile Brassica juncea cybrid Og1 and identification of the molecular basis of fertility reversion	9
Integrative transcriptomics reveals genotypic impact on sugar beet storability	9
Current status and impending progress for cassava structural genomics	9
Promoter profiling of Arabidopsis amino acid transporters: clues for improving crops	9
Expansion of the evolutionarily conserved network of J-domain proteins in the Arabidopsis mitochondrial import complex	9
Moss PPR-SMR protein PpPPR_64 influences the expression of a psaA-psaB-rps14 gene cluster and processing of the 23S–4.5S rRNA precursor in chloroplasts	9
Characterizing serotonin biosynthesis in Setaria viridis leaves and its effect on aphids	9
The transcriptome landscapes of citrus leaf in different developmental stages	9
Calmodulin7: recent insights into emerging roles in plant development and stress	9
Construction of two regulatory networks related to salt stress and lignocellulosic synthesis under salt stress based on a Populus davidiana × P. bolleana transcriptome analysis	9
Heterotrimeric Gα subunit regulates plant architecture, organ size and seed weight in the oilseed Brassica juncea	9
Active-type starch synthase (SS) IIa from indica rice partially complements the sugary-1 phenotype in japonica rice endosperm	9
Transcriptomic analysis reveals somatic embryogenesis-associated signaling pathways and gene expression regulation in maize (Zea mays L.)	9
Natural population re-sequencing detects the genetic basis of local adaptation to low temperature in a woody plant	9
Phytochelatin-mediated metal detoxification pathway is crucial for an organomercurial phenylmercury tolerance in Arabidopsis	9
To have or not to have: expression of amino acid transporters during pathogen infection	9
Combination analysis of single-molecule long-read and Illumina sequencing provides insights into the anthocyanin accumulation mechanism in an ornamental grass, Pennisetum setaceum cv. Rubrum	9
Modulation of GmFAD3 expression alters abiotic stress responses in soybean	9
H2O2 priming induces proteomic responses to defense against salt stress in maize	9
Suppressed expression of starch branching enzyme 1 and 2 increases resistant starch and amylose content and modifies amylopectin structure in cassava	8
Possible role of small secreted peptides (SSPs) in immune signaling in bryophytes	8

Evolutionary history of the mediterranean Pinus halepensis-brutia species complex using gene-resequencing and transcriptomic approaches	8
Dissection of novel candidate genes for grain texture in Russian wheat varieties	8
Into a dilemma of plants: the antagonism between chemical defenses and growth	8
Transcriptome analysis of a near-isogenic line and its recurrent parent reveals the role of Pup1 QTL in phosphorus deficiency tolerance of rice at tillering stage	8
Arabidopsis GELP7 functions as a plasma membrane-localized acetyl xylan esterase, and its overexpression improves saccharification efficiency	8
1-Octen-3-ol is formed from its primeveroside after mechanical wounding of soybean leaves	8
DNA-binding properties of the MADS-domain transcription factor SEPALLATA3 and mutant variants characterized by SELEX-seq	8
Kleisin NSE4 of the SMC5/6 complex is necessary for DNA double strand break repair, but not for recovery from DNA damage in Physcomitrella (Physcomitrium patens)	8
Decreased grain size1, a C3HC4-type RING protein, influences grain size in rice (Oryza sativa L.)	8
A candidate PpRPH gene of the D locus controlling fruit acidity in peach	8
Functional characterization of two type-1 diacylglycerol acyltransferase (DGAT1) genes from rice (Oryza sativa) embryo restoring the triacylglycerol accumulation in yeast	8
Association of gene expression with syringyl to guaiacyl ratio in sugarcane lignin	8
Transcriptome and DNA methylome analyses provide insight into the heterosis in flag leaf of inter-subspecific hybrid rice	8
SCARECROW-LIKE3 regulates the transcription of gibberellin-related genes by acting as a transcriptional co-repressor of GAI-ASSOCIATED FACTOR1	8
Ocimum sanctum, OscWRKY1, regulates phenylpropanoid pathway genes and promotes resistance to pathogen infection in Arabidopsis	8
Metabolomic profiling of wheat genotypes resistant and susceptible to root-lesion nematode Pratylenchus thornei	8
Genome-wide analysis of H3K4me3 and H3K27me3 modifications due to Lr28 for leaf rust resistance in bread wheat (Triticum aestivum)	8
Computational identification of ubiquitination sites in Arabidopsis thaliana using convolutional neural networks	8
Mapping quantitative trait loci associated with stem-related traits in maize (Zea mays L.)	8
CRISPR gene editing of major domestication traits accelerating breeding for Solanaceae crops improvement	8
Anthocyanins identification and transcriptional regulation of anthocyanin biosynthesis in purple Brassica napus	8
Biased allelic expression in tissues of F1 hybrids between tropical and temperate lotus (Nelumbo nuicfera)	8
The stress induced caleosin, RD20/CLO3, acts as a negative regulator of GPA1 in Arabidopsis	8
Heat stress during grain filling regulates seed germination through alterations of DNA methylation in barley (Hordeum vulgare L.)	8
Enhanced glutathione content improves lateral root development and grain yield in rice plants	7
Characterization of Cry2 genes (CRY2a and CRY2b) of B. napus and comparative analysis of BnCRY1 and BnCRY2a in regulating seedling photomorphogenesis	7
DELLA-GAF1 complex is involved in tissue-specific expression and gibberellin feedback regulation of GA20ox1 in Arabidopsis	7
Ethanol induces heat tolerance in plants by stimulating unfolded protein response	7
Genetic divergence in transcriptional regulators of defense metabolism: insight into plant domestication and improvement	7
Expression of peat moss VASCULAR RELATED NAC-DOMAIN homologs in Nicotiana benthamiana leaf cells induces ectopic secondary wall formation	7
Starch synthases SSIIa and GBSSI control starch structure but do not determine starch granule morphology in the absence of SSIIIa and SSIVb	7
Using interdisciplinary, phylogeny-guided approaches to understand the evolution of plant metabolism	7
Pseudocrossidium replicatum (Taylor) R.H. Zander is a fully desiccation-tolerant moss that expresses an inducible molecular mechanism in response to severe abiotic stress	7
Phylogenetic and ion-response analyses reveal a relationship between gene expansion and functional divergence in the Ca2+/cation antiporter family in Angiosperms	7
Early sensing of phosphate deprivation triggers the formation of extra root cap cell layers via SOMBRERO through a process antagonized by auxin signaling	7
How plants grow under gravity conditions besides 1 g: perspectives from hypergravity and space experiments that employ bryophytes as a model organism	7
Protein targeting to starch 1, a functional protein of starch biosynthesis in wheat (Triticum aestivum L.)	7
DNA fingerprinting reveals varietal composition of Vietnamese cassava germplasm (Manihot esculenta Crantz) from farmers’ field and genebank collections	7
Multiple and integrated functions of floral C-class MADS-box genes in flower and fruit development of Physalis floridana	7
CBM20CP, a novel functional protein of starch metabolism in green algae	6
DNA demethylase ROS1 prevents inheritable DREB1A/CBF3 repression by transgene-induced promoter methylation in the Arabidopsis ice1-1 mutant	6
Transcriptional loss of domestication-driven cytoskeletal GhPRF1 gene causes defective floral and fiber development in cotton (Gossypium)	6
Life, death and resurrection of plant GPCRs	6
Rapid sequence evolution is associated with genetic incompatibilities in the plastid Clp complex	6
How do emerging long-read sequencing technologies function in transforming the plant pathology research landscape?	6
Mutation in BEIIb mitigates the negative effect of the mutation in ISA1 on grain filling and amyloplast formation in rice	6
In Arabidopsis thaliana mitochondria 5′ end polymorphisms of nad4L-atp4 and nad3-rps12 transcripts are linked to RNA PROCESSING FACTORs 1 and 8	6
Association genetics of the parameters related to nitrogen use efficiency in Brassica juncea L.	6
The lipoxygenase OsLOX10 affects seed longevity and resistance to saline-alkaline stress during rice seedlings	6
Photosynthetic traits of Australian wild rice (Oryza australiensis) confer tolerance to extreme daytime temperatures	6
miR169 and PmRGL2 synergistically regulate the NF-Y complex to activate dormancy release in Japanese apricot (Prunus mume Sieb. et Zucc.)	6
Two trehalase isoforms, produced from a single transcript, regulate drought stress tolerance in Arabidopsis thaliana	6
Comparison of Brassica Genomes reveals asymmetrical gene retention between functional groups of genes in recurrent polyploidizations	6
The complete plastid genome sequence of the enigmatic moss, Takakia lepidozioides (Takakiopsida, Bryophyta): evolutionary perspectives on the largest collection of genes in mosses and the intensive RN	6
Functional characterization of genes with daily expression patterns in common wheat	5
Ethanol treatment enhances drought stress avoidance in cassava (Manihot esculenta Crantz)	5
AUXIN RESPONSE FACTOR 16 (StARF16) regulates defense gene StNPR1 upon infection with necrotrophic pathogen in potato	5
Tubby-like proteins (TLPs) transcription factor in different regulatory mechanism in plants: a review	5
The first homosporous lycophyte genome revealed the association between the recent dynamic accumulation of LTR-RTs and genome size variation	5
A de novo gene originating from the mitochondria controls floral transition in Arabidopsis thaliana	5
Light induces gene expression to enhance the synthesis of storage reserves in Brassica napus L. embryos	5
The interaction between exogenous IBA with sucrose, light and ventilation alters the expression of ARFs and Aux/IAA genes in Carica papaya plantlets	5
Functional analysis of β-ketoacyl-CoA synthase from biofuel feedstock Thlaspi arvense reveals differences in the triacylglycerol biosynthetic pathway among Brassicaceae	5
A mutation in Arabidopsis SAL1 alters its in vitro activity against IP3 and delays developmental leaf senescence in association with lower ROS levels	5
Cytonuclear coevolution in a holoparasitic plant with highly disparate organellar genomes	5
Anthocyanins and reactive oxygen species: a team of rivals regulating plant development?	5
RdDM pathway components differentially modulate Tobamovirus symptom development	5
CHR721, interacting with OsRPA1a, is essential for both male and female reproductive development in rice	5
Transgenerational effects of elevated CO2 on rice photosynthesis and grain yield	5
Transcriptome landscape of early inflorescence developmental stages identifies key flowering time regulators in chickpea	5
Comparative transcriptome analyses between cultivated and wild grapes reveal conservation of expressed genes but extensive rewiring of co-expression networks	5
Integrative analysis of chloroplast DNA methylation in a marine alga—Saccharina japonica	5
Early gene expression response of barley root tip to toxic concentrations of cadmium	5