OOIR: Observatory of International Research

Papers

(The median citation count of Plasmid is 1. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-11-01 to 2024-11-01.)

Article	Citations
Contemporary IncI1 plasmids involved in the transmission and spread of antimicrobial resistance in Enterobacteriaceae	49
Estimating plasmid conjugation rates: A new computational tool and a critical comparison of methods	28
Bacteriophages as sources of small non-coding RNA molecules	22
Improved pEKEx2-derived expression vectors for tightly controlled production of recombinant proteins in Corynebacterium glutamicum	21
Plasmid classifications	16
Evolution of Acinetobacter baumannii plasmids carrying the oxa58 carbapenemase resistance gene via plasmid fusion, IS26-mediated events and dif module shuffling	14
Mobile genetic elements beyond the VanB-resistance dissemination among hospital-associated enterococci and other Gram-positive bacteria	12
Evolution and dissemination of L and M plasmid lineages carrying antibiotic resistance genes in diverse Gram-negative bacteria	12
Genomic islands related to Salmonella genomic island 1; integrative mobilisable elements in trmE mobilised in trans by A/C plasmids	10
Simultaneous transformation of five vectors in Gluconobacter oxydans	10
Genomic analysis of plasmid content in food isolates of E. coli strongly supports its role as a reservoir for the horizontal transfer of virulence and antibiotic resistance genes	9
The ever-expanding tcp conjugation locus of pCW3 from Clostridium perfringens	8
An improved direct metamobilome approach increases the detection of larger-sized circular elements across kingdoms	8
Guidelines for the estimation and reporting of plasmid conjugation rates	7
Replication initiator proteins of Acinetobacter baumannii plasmids: An update note	7
Characterization of blaCMY-2-carrying IncC and rmtB-carrying IncI1/ST136 plasmids in an avian Escherichia coli ST224 strain	7
An overview of plasmid transfer in the plant microbiome	7
SSR identification and phylogenetic analysis in four plant species based on complete chloroplast genome sequences	6
Screening of CHO-K1 endogenous promoters for expressing recombinant proteins in mammalian cell cultures	6
Frequency and diversity of small plasmids in mesophilic Aeromonas isolates from fish, water and sediment	6
Evolution of IS26-bounded pseudo-compound transposons carrying the tet(C) tetracycline resistance determinant	6
Quantifying plasmid dynamics using single-cell microfluidics and image bioinformatics	6
Insights into the individual evolutionary origins of Yersinia virulence factor effector proteins	5
Characterization of the Agrobacterium octopine-cucumopine catabolic plasmid pAtAg67	5
Novel class 1 integron harboring antibiotic resistance genes in wastewater-derived bacteria as revealed by functional metagenomics	5

An X1α plasmid from a Salmonella enterica serovar Ohio isolate carrying a novel IS26-bounded tet(C) pseudo-compound transposon	4
Identification and characterization of a spreadable IncI1 plasmid harbouring a blaCTX-M-15 gene in an Italian human isolate of Salmonella serovar Napoli	4
IncFV plasmid pED208: Sequence analysis and evidence for translocation of maintenance/leading region proteins through diverse type IV secretion systems	4
Reprogramming Targeted-Antibacterial-Plasmids (TAPs) to achieve broad-host range antibacterial activity	4
Transcriptomic analysis of Entamoeba histolytica reveals domain-specific sense strand expression of LINE-encoded ORFs with massive antisense expression of RT domain	4
The extrachromosomal elements of the Naegleria genus: How little we know	4
Molecular characterization of two novel NDM-1-producing atypical enteroaggregative Escherichia coli isolates from patients	3
Conjugation-mediated transfer of pXO16, a large plasmid from Bacillus thuringiensis sv. israelensis, across the Bacillus cereus group and its impact on host phenotype	3
IS26-mediated loss of the translocatable unit from Tn4352B requires the presence of the recA1 allele	3
Plasmid localization of sole rrn operon in genomes of Oecophyllibacter saccharovorans (Acetobacteraceae)	2
Carriage of three plasmids in a single human clinical isolate of Clostridioides difficile	2
In-silico functional analysis of hypothetical proteins from Lactiplantibacillus plantarum plasmids reveals enrichment of cell envelope proteins	2
Utilization of a tetracycline-inducible system for high-level expression of recombinant proteins in Francisella tularensis LVS	2
Can SGI1 family integrative mobilizable elements overcome entry exclusion exerted by IncA and IncC plasmids on IncC plasmids?	2
Brick into the Gateway (BiG): A novel approach for faster cloning combining Golden Gate and Gateway methods	2
Polluted wetlands contain multidrug-resistance plasmids encoding CTX-M-type extended-spectrum β-lactamases	2
The extensively antibiotic resistant ST111 Acinetobacter baumannii isolate RBH2 carries an extensive mobile element complement of plasmids, transposons and insertion sequences	1
Incorporating the plasmidome into antibiotic resistance surveillance in animal agriculture	1
Plasmidome analysis of a hospital effluent biofilm: Status of antibiotic resistance	1
Variation in the plasmid backbone and dif module content of R3-T33 Acinetobacter plasmids	1
A subclass of the IS1202 family of bacterial insertion sequences targets XerCD recombination sites	1
A role for the last C-terminal helix of the F plasmid segregating protein SopA in nucleoid binding and plasmid maintenance	1
Implementation of a tunable t-CRISPRi system for gene regulation in Giardia duodenalis	1
Sequence polarity between the promoter and the adjacent gene modulates promoter activity	1
Interference of ISEcp1-blaCTX-M-1 with the shufflon rearrangement in IncI1 plasmids	1
The fluorination effect on the transfection efficacy of cell penetrating peptide complexes	1
Enhancement of transgene expression by the β-catenin inhibitor iCRT14	1
An easily modifiable conjugative plasmid for studying horizontal gene transfer	1
One-step construction of a food-grade expression system based on the URA3 gene in Kluyveromyces lactis	1
Effect of the S008-sgaCD operon on IncC plasmid stability in the presence of SGI1-K or absence of an SGI1 variant	1