Bulletin of Mathematical Biology

Article	Citations
Measles Infection Dose Responses: Insights from Mathematical Modeling	64
A Data-Driven Mathematical Model for Clonorchiasis with Seasonality	50
Modelling the role of STIM1 and STIM2 in $$\text {Ca}^{\text {2}+}$$ oscillations in T-lymphocytes	44
Theoretical Study of Retinoblastoma in the Hereditary and Non-hereditary Processes Including the Cancer Growth	39
Statistical Mobility of Multicellular Colonies of Flagellated Swimming Cells	34
Computational Model of the Effect of Mitochondrial Dysfunction on Excitation–Contraction Coupling in Skeletal Muscle	34
A Mathematical Study of the Role of tBregs in Breast Cancer	32
Vector Encoding of Phylogenetic Trees by Ordered Leaf Attachment	32
Optimal Immunization Strategy for Protection of Children < 1 Year Against Respiratory Syncytial Virus Infection and Hospitalization	29
Bayesian Identifiability Analysis for Infectious Disease Models: Parameter Reduction and Model Selection	26
When are Quarnets Sufficient to Reconstruct Semi-directed Phylogenetic Networks?	25
Availability of Charged tRNAs Drives Maximal Protein Synthesis at Intermediate Levels of Codon Usage Bias	23
Mathematical Models of Early Hepatitis B Virus Dynamics in Humanized Mice	21
Modelling Radiation Cancer Treatment with a Death-Rate Term in Ordinary and Fractional Differential Equations	21
A Data-Informed Mathematical Model of Microglial Cell Dynamics During Ischemic Stroke in the Middle Cerebral Artery	20
Travelling Waves in Gene Expression: A Mathematical Model of Cell-State Dynamics in Melanoma	20
A SIMPL Model of Phage-Bacteria Interactions Accounting for Mutation and Competition	20
Assessing the Role of Patient Generation Techniques in Virtual Clinical Trial Outcomes	19
Noise-Driven Transitions in Collective Foraging of Ant Colonies	19
Autopolyploidy, Allopolyploidy, and Phylogenetic Networks with Horizontal Arcs	18
Maximum Likelihood Estimation for Unrooted 3-Leaf Trees: An Analytic Solution for the CFN Model	18
A Computational Framework for the Administration of 5-Aminovulinic Acid Before Glioblastoma Surgery	18
Effects of Heterogeneity on Cancer: A Game Theory Perspective	17
Parameter Estimation and Identifiability in Kinetic Flux Profiling Models of Metabolism	17
Pretty Darn Good Control: When are Approximate Solutions Better than Approximate Models	17

A Framework for Parameter Estimation and Uncertainty Quantification in Systems Biology Using Quantile Regression and Physics-Informed Neural Networks	17
Macrophage Anti-inflammatory Behaviour in a Multiphase Model of Atherosclerotic Plaque Development	16
Inference of Genetic Networks from Pseudo Time Series of Single-cell Gene Expression Data using Modified Random Forests	16
Evolutionary Invasion Analysis of Modern Epidemics Highlights the Context-Dependence of Virulence Evolution	16
0–1 Laws for Pattern Occurrences in Phylogenetic Trees and Networks	16
Mathematical Modelling and Uncertainty Quantification for Analysis of Biphasic Coral Reef Recovery Patterns	15
Stochastic Reaction Networks Within Interacting Compartments with Content-Dependent Fragmentation	15
Pathophysiological Mechanisms of the Onset, Development, and Disappearance Phases of Skin Eruptions in Chronic Spontaneous Urticaria	15
Deterministic and Stochastic Infection Dynamics in a Population Subject to Stress	15
In Vitro Analysis and Dynamic Modeling of SARS-CoV-2 Infection Inhibition by Sigma-1 Receptor Antagonist PB28	15
Modeling the Development of Cellular Exhaustion and Tumor-Immune Stalemate	15
Make the Most of Your Society Journal	14
Statistical Analysis of Two-Compartment Pharmacokinetic Models with Drug Non-adherence	14
Effect of Human Behavior on the Evolution of Viral Strains During an Epidemic	14
Transmission of Multiple Pathogens Across Species	14
A Kinetic Finite Volume Discretization of the Multidimensional PIDE Model for Gene Regulatory Networks	14
On Modeling Ovarian Aging and Menopause Timing	14
Exploring the Evolution of Altruistic Punishment with a PDE Model of Cultural Multilevel Selection	14
Characterizing Long Transients in Consumer–Resource Systems With Group Defense and Discrete Reproductive Pulses	14
Differentiating Contact with Symptomatic and Asymptomatic Infectious Individuals in a SEIR Epidemic Model	14
Modelling the Impact of HIF on Metabolism and the Extracellular Matrix: Consequences for Tumour Growth and Invasion	14
A Spatial Kinetic Model of Crowd Evacuation Dynamics with Infectious Disease Contagion	13
Enumeration of Rooted Binary Unlabeled Galled Trees	13
p53 Orchestrates Cancer Metabolism: Unveiling Strategies to Reverse the Warburg Effect	13
$$R_0$$ May Not Tell Us Everything: Transient Disease Dynamics of Some SIR Models Over Patchy Environments	13
Optimal Harvesting in Stream Networks: Maximizing Biomass and Yield	13
Pattern Formation Driven by Nonlocal Perception in a Delayed Pine Wilt Disease Model with Top-Hat Kernel	13
A Continuation Technique for Maximum Likelihood Estimators in Biological Models	13
Fixed and Distributed Gene Expression Time Delays in Reaction–Diffusion Systems	13
Relaxation and Noise-Driven Oscillations in a Model of Mitotic Spindle Dynamics	12
Ecological Effects of Predator Harvesting and Environmental Noises on Oceanic Coral Reefs	12
Identifies Tipping Points of cell Fate Transitions by Network Relative Entropy	12
Revisiting Fishery Sustainability Targets	12
Modelling Mucus Clearance in Sinuses: Thin-Film Flow Inside a Fluid-Producing Cavity Lined with an Active Surface	12
Enhancing pedagogical practices with Artificial Neural Networks in the age of AI to engage the next generation in Biomathematics	12
Convex Representation of Metabolic Networks with Michaelis–Menten Kinetics	12
Multi-layer Bundling as a New Approach for Determining Multi-scale Correlations Within a High-Dimensional Dataset	12
Bounding the Softwired Parsimony Score of a Phylogenetic Network	12
Spaces of Phylogenetic Diversity Indices: Combinatorial and Geometric Properties	12
Accidental and Regulated Cell Death in Yeast Colony Biofilms	12
Multi-point Infection Dynamics of Hepatitis B in the Presence of Sub-viral Particles	12
Speed and Shape of Population Fronts with Density-Dependent Diffusion	11
Personalized Spatiotemporal Radiotherapy for GBM: A PDE-Constrained Optimization Study	11
Generation of Virtual Populations for Quantitative Systems Pharmacology Through Advanced Sampling Methods	11
The Phylogenetic Structure of $$\beta $$-diversity: Covariance Matrix Sparsification of Critical Beta-splitting Trees	11
Deriving Optimal Treatment Timing for Adaptive Therapy: Matching the Model to the Tumor Dynamics	11
Fungal Parasite Transmission in a Planktonic Ecosystem Under Light and Nutrient Constraints	11
Integration of Immune Cell-Target Cell Conjugate Dynamics Changes the Time Scale of Immune Control of Cancer	11
Prevalence Estimation Methods for Time-Dependent Antibody Kinetics of Infected and Vaccinated Individuals: A Markov Chain Approach	10
Analysis of War and Conflict Effect on the Transmission Dynamics of the Tenth Ebola Outbreak in the Democratic Republic of Congo	10

A 3D Computational Study on the Formation and Progression of Tumor Cells in Diffuse Gastric Cancer	10
Correction to: Computational Model of the Effect of Mitochondrial Dysfunction on Excitation–Contraction Coupling in Skeletal Muscle	10
Labellable Phylogenetic Networks	10
Channel Transport: Gating, Geometry, and Heterogeneous Diffusion	10
Multiscale Asymptotic Analysis Reveals How Cell Growth and Subcellular Compartments Affect Tissue-Scale Hormone Transport	10
Optimality of Maximal-Effort Vaccination	10
A Risk-Structured Model of the Influence of Mental Health on Opioid Addiction	10
COVID-19 Vaccination and Healthcare Demand	10
The Evolution of the Age of Onset of Resistance to Infectious Disease	10
A Data-Validated Stoichiometric Model for the Priming Effect	10
Macrophage Polarization Determines Inflammation Amplification and Resolution	10
Mathematical Assessment of the Role of Intervention Programs for Malaria Control	9
A Graph-Theoretical Framework for Automated Computation of Reproduction Numbers in Deterministic Epidemiological Models	9
Modeling Syphilis and HIV Coinfection: A Case Study in the USA	9
Modelling the Impact of Phenotypic Heterogeneity on Cell Migration: A Continuum Framework Derived from Individual-Based Principles	9
Nonlinear Regression Modelling: A Primer with Applications and Caveats	9
Bounding Seed Loss from Isolated Habitat Patches	9
Optimization Therapy by Coupling Intermittent Androgen Suppression with Impulsive Chemotherapy for a Prostate Cancer Model	8
Inference of Pairwise Interactions from Strain Frequency Data Across Settings and Context-Dependent Mutual Invasibilities	8
Predicting the Behavior of Sparsely-Sampled Systems Across Neurobiology and Epidemiology	8
Performance Study of Two Serial Interconnected Chemostats with Mortality	8
Impacts of Tempo and Mode of Environmental Fluctuations on Population Growth: Slow- and Fast-Limit Approximations of Lyapunov Exponents for Periodic and Random Environments	8
Analysis of a COVID-19 Epidemic Model with Seasonality	8
A Random Differential Equation Approach for Modeling the Growth of Microalgae in Photobioreactors	8
Tissue Oxygenation Around Capillaries: Effects of Hematocrit and Arteriole Oxygen Condition	8
Infectious Disease in the Workplace: Quantifying Uncertainty in Transmission	8
Bifurcation and Pattern Formation in an Activator–Inhibitor Model with Non-local Dispersal	8
Analysing the Effect of Test-and-Trace Strategy in an SIR Epidemic Model	8
Modeling Epithelial-Mesenchymal Transition with Partial Differential Equations: Implications for Metastatic Progression and Treatment Strategies	8
NIAID/SMB Workshop on Multiscale Modeling of Infectious and Immune-Mediated Diseases	8
A Countable-Type Branching Process Model for the Tug-of-War Cancer Cell Dynamics	8
Oscillations in a Spatial Oncolytic Virus Model	8
Linking Spontaneous Behavioral Changes to Disease Transmission Dynamics: Behavior Change Includes Periodic Oscillation	8
Invasiveness of a Growth-Migration System in a Two-dimensional Percolation cluster: A Stochastic Mathematical Approach	8
The GFB Tree and Tree Imbalance Indices	8
Towards Inferring Network Properties from Epidemic Data	8
Dynamics and Persistence of a Generalized Multi-strain SIS Model	8
Integrating Mechanistic Modeling and Machine Learning to Study CD4+/CD8+ CAR-T Cell Dynamics with Tumor Antigen Regulation	7
Making Predictions Using Poorly Identified Mathematical Models	7
Targeting CD4+ T cell Exhaustion to Improve Future Immunotherapy Strategies	7
Designing Weights for Quartet-Based Methods When Data are Heterogeneous Across Lineages	7
The Effect of Antibodies in the Presence of Syncytia During Viral Infections	7
A Model for the Coexistence of Competing Mechanisms for $$\text {Ca}^{\text {2}+}$$ Oscillations in T-lymphocytes	7
Does GLUT4 Queue? A Mechanistic Mathematical Model for Insulin Response in Adipocytes	7
Statistical and Structural Bias in Birth-Death Models	7
Connecting Agent-Based Models with High-Dimensional Parameter Spaces to Multidimensional Data Using SMoRe ParS: A Surrogate Modeling Approach	7
Parameter Optimization for a Neurotransmission Recovery Model	7
Spatial Segregation Across Travelling Fronts in Individual-Based and Continuum Models for the Growth of Heterogeneous Cell Populations	7
Source-Sink Dynamics in a Two-Patch SI Epidemic Model with Life Stages and No Recovery from Infection	7
Bayesian Inference of Phylogenetic Distances: Revisiting the Eigenvalue Approach	7
Chase-and-Run and Chirality in Nonlocal Models of Pattern Formation	7
Modeling the effects of a Shock-and-Kill Treatment for HIV: Latency-Reversing Agents and Natural Killer Cells	7
Effect of Movement on the Early Phase of an Epidemic	7
Stochastic Analysis of Taxis and Kinesis Properties of Colonial Protozoa	7
VisualPDE: Rapid Interactive Simulations of Partial Differential Equations	7
A mathematical investigation of exosome and lactate levels interplay in an in vitro and in vivo tumors	6
Stochastic Reaction Networks Within Interacting Compartments	6
Cost Optimisation of Individual-Based Institutional Reward Incentives for Promoting Cooperation in Finite Populations	6
Is Thymic Involution Truly a Deterioration or an Adaptation?	6
Whole-Colony Dynamic Energy Budget Model for Bumble Bees: Assessing the Impact of Wildflower Patches on Crop Pollination	6
Asymptotic Analysis of Optimal Vaccination Policies	6
Evolving Improved Sampling Protocols for Dose–Response Modelling Using Genetic Algorithms with a Profile-Likelihood Metric	6
Mathematical Modeling of Mating Probability and Fertile Egg Production in Helminth Parasites	6
The Impact of Host Abundance on the Epidemiology of Tick-Borne Infection	6
Harnessing Flex Point Symmetry to Estimate Logistic Tumor Population Growth	6
Modelling ion channels with a view towards identifiability	6
A Multiscale Model of COVID-19 Dynamics	6
A New Method for Low Density Distribution Modeling and Near Threatened Species: The Study Case of Plectrohyla Guatemalensis	6
Practical Identifiability in a Viscoelastic Respiratory Model for Mechanical Ventilation	6
Dimensions of Level-1 Group-Based Phylogenetic Networks	6
A Practical Identifiability Criterion Leveraging Weak-Form Parameter Estimation	6
Comparison Theorems for Stochastic Chemical Reaction Networks	6
A Stochastic Model of Cortical Microtubule Anchoring and Mechanics Provides Regulatory Control of Microtubule Shape	6
Counting Rankings of Tree-Child Networks	6
Circulation of Respiratory Viruses in the City: Towards an Agent-Based Ecosystem model	6
Relational Persistent Homology for Multispecies Data with Application to the Tumor Microenvironment	5
Waves in a Stochastic Cell Motility Model	5
Slow Evolution Towards Generalism in a Model of Variable Dietary Range	5
When Strain Meets Stress: Threshold Dynamics and Regime Shifts in Wolbachia-Based Mosquito Population Replacement	5
Modelling the Impact of NETosis During the Initial Stage of Systemic Lupus Erythematosus	5

Vascular-Coupled Modeling of Treatment Resistance in Tyrosine Kinase Inhibitor Therapy: Parameter Estimation and Phase-Dependent Sensitivity Analysis	5
Optimal Control in Combination Therapy for Heterogeneous Cell Populations with Drug Synergies	5
Boolean Models of the Transport, Synthesis, and Metabolism of Tryptophan in Escherichia coli	5
Theory of Stoichiometric Intraguild Predation: Algae, Ciliate, and Daphnia	5
Phylogenetic Network Models as Graphical Models	5
Modeling the Impact of Seasonality on Mosquito Population Dynamics: Insights for Vector Control Strategies	5
Evaluating the Intensity of a Potential Yellow Fever Outbreak During an International Trading Event: a Case Study on Canton Fair	5
Insights on Influenza Control Through Vaccination for the 2023-2024 Season in the USA: Mathematical Modeling, Optimal Control, and Sensitivity Analysis	5
Homogenization Reveals Large-Scale Dynamics in the Spread of Chronic Wasting Disease	5
Investigation of a Two-Patch Within-Host Model of Hepatitis B Viral Infection	5
The implications of host–pathogen co-evolutionary outcomes on macro-epidemics based on a combined-host strategy	5
Estimation of Parameter Distributions for Reaction-Diffusion Equations with Competition using Aggregate Spatiotemporal Data	5
Asymptotic Enumeration of Normal and Hybridization Networks via Tree Decoration	5
Spatiotemporal Dynamics of a Mussel-Algae Model on the Square Domain	5
Correction to: Combining Mechanisms of Growth Arrest in Solid Tumours: A Mathematical Investigation	5
PrEP Intervention in the Mitigation of HIV/AIDS Epidemics in China via a Data-Validated Age-Structured Model	5
Format-Preserving Reduction of Canonical Nonlinear Models	5
Boundary Conditions Cause Different Generic Bifurcation Structures in Turing Systems	5
The Role of Cytonemes and Diffusive Transport in the Establishment of Morphogen Gradients	5
Modeling the Effects of Temperature and Resource Quality on the Outcome of Competition Between Aedes aegypti and Aedes albopictus and the Resulting Risk of Vector-Borne Disease	5
Optimal Control with RdCVFL for Degenerating Photoreceptors	5
Simulation of Angiogenesis in Three Dimensions: Development of the Retinal Circulation	5
Reaction Network Analysis of Metabolic Insulin Signaling	5
The Detailed Balance Property and Chemical Systems out of Equilibrium	5
Quantitative Assessment of a Dual Epidemic Caused by Tuberculosis and HIV in the Philippines	5
Direct Estimation of Parameters in ODE Models Using WENDy: Weak-Form Estimation of Nonlinear Dynamics	5
Revisiting Turing’s Chemical Basis of Morphogenesis	5
Impact of Resistance on Therapeutic Design: A Moran Model of Cancer Growth	5
Matching Habitat Choice and the Evolution of a Species’ Range	5
Identifiability in Epidemic Models with Prior Immunity and Under-Reporting	5
The Unification of Evolutionary Dynamics through the Bayesian Decay Factor in a Game on a Graph	5
A Theoretical Analysis of Mass Testing Strategies to Control Epidemics	5
Models for Implant-Induced Capsular Contracture Post Breast Cancer Surgery	5
A Nonlinear Delay Model for Metabolic Oscillations in Yeast Cells	5