OOIR: Observatory of International Research

Papers

(The TQCC of Bulletin of Mathematical Biology is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)

Article	Citations
Special Tributes	37
Modeling and Evaluation of the Joint Prevention and Control Mechanism for Curbing COVID-19 in Wuhan	30
From Policy to Prediction: Forecasting COVID-19 Dynamics Under Imperfect Vaccination	26
Resonance in Physiologically Structured Population Models	26
Measles Infection Dose Responses: Insights from Mathematical Modeling	24
Assessing the Role of Patient Generation Techniques in Virtual Clinical Trial Outcomes	23
A Mathematical Study of the Role of tBregs in Breast Cancer	21
Statistical Mobility of Multicellular Colonies of Flagellated Swimming Cells	21
Mathematical Models of Early Hepatitis B Virus Dynamics in Humanized Mice	21
Range Shifts Under Constant-Speed and Accelerated Climate Warming	18
Modelling Radiation Cancer Treatment with a Death-Rate Term in Ordinary and Fractional Differential Equations	17
Effect of Population Partitioning on the Probability of Silent Circulation of Poliovirus	17
A Data-Informed Mathematical Model of Microglial Cell Dynamics During Ischemic Stroke in the Middle Cerebral Artery	16
Alternative Strategies for the Estimation of a Disease’s Basic Reproduction Number: A Model-Agnostic Study	16
Effects of Heterogeneity on Cancer: A Game Theory Perspective	15
Autopolyploidy, Allopolyploidy, and Phylogenetic Networks with Horizontal Arcs	15
Isolating Patterns in Open Reaction–Diffusion Systems	15
Computational Model of the Effect of Mitochondrial Dysfunction on Excitation–Contraction Coupling in Skeletal Muscle	15
Orchard Networks are Trees with Additional Horizontal Arcs	15
Host Diversification May Split Epidemic Spread into Two Successive Fronts Advancing at Different Speeds	14
A Hypothesis-Free Bridging of Disease Dynamics and Non-pharmaceutical Policies	14
Modeling the Development of Cellular Exhaustion and Tumor-Immune Stalemate	14
Macrophage Anti-inflammatory Behaviour in a Multiphase Model of Atherosclerotic Plaque Development	14
Transition Therapy: Tackling the Ecology of Tumor Phenotypic Plasticity	14
A Framework for Parameter Estimation and Uncertainty Quantification in Systems Biology Using Quantile Regression and Physics-Informed Neural Networks	14

Maximum Likelihood Estimation for Unrooted 3-Leaf Trees: An Analytic Solution for the CFN Model	13
A Computational Framework for the Administration of 5-Aminovulinic Acid Before Glioblastoma Surgery	13
Mathematical Modelling Highlights the Potential for Genetic Manipulation as an Adjuvant to Counter Efflux-Mediated MDR in Salmonella	13
The Effect of Harvesting Adults on the Evolution of Reproduction Age Via Density-Dependent Juvenile Mortality	13
0–1 Laws for Pattern Occurrences in Phylogenetic Trees and Networks	13
A Mean-Field Approximation of SIR Epidemics on an Erdös–Rényi Network Model	13
Parameter Estimation and Identifiability in Kinetic Flux Profiling Models of Metabolism	13
Enumeration of Rooted Binary Unlabeled Galled Trees	12
Pretty Darn Good Control: When are Approximate Solutions Better than Approximate Models	12
Evolutionary Invasion Analysis of Modern Epidemics Highlights the Context-Dependence of Virulence Evolution	12
Bifurcation Analysis of a Heat-Sensitive Epigenetic Regulatory Network	12
Testing and Isolation Efficacy: Insights from a Simple Epidemic Model	12
A Spatial Kinetic Model of Crowd Evacuation Dynamics with Infectious Disease Contagion	11
Effect of Human Behavior on the Evolution of Viral Strains During an Epidemic	11
$$R_0$$ May Not Tell Us Everything: Transient Disease Dynamics of Some SIR Models Over Patchy Environments	11
Exploring the Evolution of Altruistic Punishment with a PDE Model of Cultural Multilevel Selection	11
A Comparison of Deterministic and Stochastic Plant-Vector-Virus Models Based on Probability of Disease Extinction and Outbreak	11
Independent Decompositions of Chemical Reaction Networks	11
Fixed and Distributed Gene Expression Time Delays in Reaction–Diffusion Systems	11
Designing Drug Regimens that Mitigate Nonadherence	11
p53 Orchestrates Cancer Metabolism: Unveiling Strategies to Reverse the Warburg Effect	11
Modelling Mucus Clearance in Sinuses: Thin-Film Flow Inside a Fluid-Producing Cavity Lined with an Active Surface	10
Characterizing Long Transients in Consumer–Resource Systems With Group Defense and Discrete Reproductive Pulses	10
A Continuation Technique for Maximum Likelihood Estimators in Biological Models	10
A Kinetic Finite Volume Discretization of the Multidimensional PIDE Model for Gene Regulatory Networks	10
Modelling the Impact of HIF on Metabolism and the Extracellular Matrix: Consequences for Tumour Growth and Invasion	10
Pathophysiological Mechanisms of the Onset, Development, and Disappearance Phases of Skin Eruptions in Chronic Spontaneous Urticaria	10
Local Overfishing Patterns Have Regional Effects on Health of Coral, and Economic Transitions Can Promote Its Recovery	10
Differentiating Contact with Symptomatic and Asymptomatic Infectious Individuals in a SEIR Epidemic Model	10
Make the Most of Your Society Journal	10
Bounding the Softwired Parsimony Score of a Phylogenetic Network	9
Spaces of Phylogenetic Diversity Indices: Combinatorial and Geometric Properties	9
Spreading Properties for SIR Models on Homogeneous Trees	9
A Comparison of the “Reduced Losses” and “Increased Production” Models for Mussel Bed Dynamics	9
Modelling Oscillatory Patterns in the Bovine Estrous Cycle with Boolean Delay Equations	9
Multi-layer Bundling as a New Approach for Determining Multi-scale Correlations Within a High-Dimensional Dataset	9
Statistical Analysis of Two-Compartment Pharmacokinetic Models with Drug Non-adherence	9
Revisiting Fishery Sustainability Targets	9
Derivation and Analysis of a Discrete Predator–Prey Model	9
Towards Building a Sustainable Future: Positioning Ecological Modelling for Impact in Ecosystems Management	9
Relaxation and Noise-Driven Oscillations in a Model of Mitotic Spindle Dynamics	9
Speed and Shape of Population Fronts with Density-Dependent Diffusion	9
Correction to: Red Light and the Dormancy–Germination Decision in Arabidopsis Seeds	9
Fungal Parasite Transmission in a Planktonic Ecosystem Under Light and Nutrient Constraints	9
Integration of Immune Cell-Target Cell Conjugate Dynamics Changes the Time Scale of Immune Control of Cancer	9
Convex Representation of Metabolic Networks with Michaelis–Menten Kinetics	9
A 3D Computational Study on the Formation and Progression of Tumor Cells in Diffuse Gastric Cancer	8
Learning Biological Dynamics From Spatio-Temporal Data by Gaussian Processes	8
Optimality of Maximal-Effort Vaccination	8
Mathematical Assessment of the Role of Intervention Programs for Malaria Control	8

The Evolution of the Age of Onset of Resistance to Infectious Disease	8
Modeling the Relationship Between Antibody-Dependent Enhancement and Disease Severity in Secondary Dengue Infection	8
Multiscale Asymptotic Analysis Reveals How Cell Growth and Subcellular Compartments Affect Tissue-Scale Hormone Transport	8
Correction to: Computational Model of the Effect of Mitochondrial Dysfunction on Excitation–Contraction Coupling in Skeletal Muscle	8
The Impact of Quarantine and Medical Resources on the Control of COVID-19 in Wuhan based on a Household Model	8
Prevalence Estimation Methods for Time-Dependent Antibody Kinetics of Infected and Vaccinated Individuals: A Markov Chain Approach	8
COVID-19 Vaccination and Healthcare Demand	8
Targeting Cellular DNA Damage Responses in Cancer: An In Vitro-Calibrated Agent-Based Model Simulating Monolayer and Spheroid Treatment Responses to ATR-Inhibiting Drugs	8
Ecological Effects of Predator Harvesting and Environmental Noises on Oceanic Coral Reefs	8
Analysis of War and Conflict Effect on the Transmission Dynamics of the Tenth Ebola Outbreak in the Democratic Republic of Congo	8
A Data-Validated Stoichiometric Model for the Priming Effect	8
Back to the Roots: A Discrete Kermack–McKendrick Model Adapted to Covid-19	8
Modeling Syphilis and HIV Coinfection: A Case Study in the USA	8
A Risk-Structured Model of the Influence of Mental Health on Opioid Addiction	8
Labellable Phylogenetic Networks	8
A Model-Strengthened Imaging Biomarker for Survival Prediction in EGFR-Mutated Non-small-cell Lung Carcinoma Patients Treated with Tyrosine Kinase Inhibitors	7
Coupling Epidemiological Models with Social Dynamics	7
Nonlinear Regression Modelling: A Primer with Applications and Caveats	7
Optimization Therapy by Coupling Intermittent Androgen Suppression with Impulsive Chemotherapy for a Prostate Cancer Model	7
A Countable-Type Branching Process Model for the Tug-of-War Cancer Cell Dynamics	7
Modelling Immune Memory Development	7
Mathematical Modeling and Analysis of CD200–CD200R in Cancer Treatment	7
NIAID/SMB Workshop on Multiscale Modeling of Infectious and Immune-Mediated Diseases	7
Towards Inferring Network Properties from Epidemic Data	7
Infectious Disease in the Workplace: Quantifying Uncertainty in Transmission	7
Analysis of a COVID-19 Epidemic Model with Seasonality	7
Linking Spontaneous Behavioral Changes to Disease Transmission Dynamics: Behavior Change Includes Periodic Oscillation	7
Bounding Seed Loss from Isolated Habitat Patches	7
Bayesian-Weighted Triplet and Quartet Methods for Species Tree Inference	6
Tissue Oxygenation Around Capillaries: Effects of Hematocrit and Arteriole Oxygen Condition	6
Correction to: Mathematical Modelling of Alternative Pathway of Complement System	6
Dynamics of Stoichiometric Autotroph–Mixotroph–Bacteria Interactions in the Epilimnion	6
Dynamical Differences in Respiratory Syncytial Virus	6
Cost Optimisation of Individual-Based Institutional Reward Incentives for Promoting Cooperation in Finite Populations	6
Designing Weights for Quartet-Based Methods When Data are Heterogeneous Across Lineages	6
Predicting the Behavior of Sparsely-Sampled Systems Across Neurobiology and Epidemiology	6
Stochastic Modeling of In Vitro Bactericidal Potency	6
Making Predictions Using Poorly Identified Mathematical Models	6
Oscillations in a Spatial Oncolytic Virus Model	6
Source-Sink Dynamics in a Two-Patch SI Epidemic Model with Life Stages and No Recovery from Infection	6
Targeting CD4+ T cell Exhaustion to Improve Future Immunotherapy Strategies	6
Asymptotic Analysis of Optimal Vaccination Policies	6
Invasiveness of a Growth-Migration System in a Two-dimensional Percolation cluster: A Stochastic Mathematical Approach	6
Connecting Agent-Based Models with High-Dimensional Parameter Spaces to Multidimensional Data Using SMoRe ParS: A Surrogate Modeling Approach	6
Performance Study of Two Serial Interconnected Chemostats with Mortality	6
Bayesian Inference of Phylogenetic Distances: Revisiting the Eigenvalue Approach	6
Bifurcation and Pattern Formation in an Activator–Inhibitor Model with Non-local Dispersal	6
Analysing the Effect of Test-and-Trace Strategy in an SIR Epidemic Model	6
A Model for the Coexistence of Competing Mechanisms for $$\text {Ca}^{\text {2}+}$$ Oscillations in T-lymphocytes	6
Evolving Improved Sampling Protocols for Dose–Response Modelling Using Genetic Algorithms with a Profile-Likelihood Metric	6
A New Method for Low Density Distribution Modeling and Near Threatened Species: The Study Case of Plectrohyla Guatemalensis	6
VisualPDE: Rapid Interactive Simulations of Partial Differential Equations	5
Relation Between the Number of Peaks and the Number of Reciprocal Sign Epistatic Interactions	5
Mechanical Torque Promotes Bipolarity of the Mitotic Spindle Through Multi-centrosomal Clustering	5
Vaccination and Quarantine Effect on COVID-19 Transmission Dynamics Incorporating Chinese-Spring-Festival Travel Rush: Modeling and Simulations	5
A Stochastic Model of Cortical Microtubule Anchoring and Mechanics Provides Regulatory Control of Microtubule Shape	5
Random Search in Fluid Flow Aided by Chemotaxis	5
A Nonlinear Delay Model for Metabolic Oscillations in Yeast Cells	5
Harnessing Flex Point Symmetry to Estimate Logistic Tumor Population Growth	5
Transmission Dynamics of Tuberculosis with Age-specific Disease Progression	5
Effect of Movement on the Early Phase of an Epidemic	5
A Multiscale Model of COVID-19 Dynamics	5
Correction to: Combining Mechanisms of Growth Arrest in Solid Tumours: A Mathematical Investigation	5
Combining Mechanisms of Growth Arrest in Solid Tumours: A Mathematical Investigation	5
Comparison Theorems for Stochastic Chemical Reaction Networks	5
Intermittent Hormone Therapy Models Analysis and Bayesian Model Comparison for Prostate Cancer	5
The Impact of Host Abundance on the Epidemiology of Tick-Borne Infection	5
Circulation of Respiratory Viruses in the City: Towards an Agent-Based Ecosystem model	5
Simulation of Angiogenesis in Three Dimensions: Development of the Retinal Circulation	5