Progress in Biophysics & Molecular Biology

Article	Citations
Commentary on Baverstock; the gene; an appraisal	55
Editorial for volume 171	54
Editorial for volume 172	51
Stages, scaffolds and strings in the spatial organisation of non-homologous end joining: Insights from X-ray diffraction and Cryo-EM	50
ENRICH: A fast method to improve the quality of flexible macromolecular reconstructions	48
Editorial for volume 169	48
Spectral characterization of cell surface motion for mechanistic investigations of cellular mechanobiology	48
The generation of the flower by self-organisation	48
Editorial Board	46
Editors introduction JBPM volume 174	42
Transforming agents: The power of structural modifications in glioblastoma multiforme therapy	37
Cellular Darwinism: Regulatory networks, stochasticity, and selection in cancer development	34
The role of non-coding genome in the behavior of infiltrated myeloid-derived suppressor cells in tumor microenvironment; a perspective and state-of-the-art in cancer targeted therapy	33
The role of ion channels in immune-related diseases	33
Biological autoluminescence as a perturbance-free method for monitoring oxidation in biosystems	31
Electrical impedance sensing in stem cell research: Insights, applications, and future directions	29
Coronavirus disease 2019 (COVID-19): Biophysical and biochemical aspects of SARS-CoV-2 and general characteristics	28
Corrigendum to “A survey of pathways for mechano-electric coupling in the atria” [Prog. Biophys. Mol. Biol. 159 (January 2021) 136–145]	28
Metabolite Biomarkers of Response (BoRs): Towards a fingerprint for the evolution of metastatic breast cancer	27
Insulin fibrillation: Strategies for inhibition	27
Editorial Board	27
Corrigendum to “Investigation of machine learning techniques on proteomics: A comprehensive survey [Prog. Biophys. Mol. Biol. 149 (2019) 54–69]	27
The renaissance in biophysics and molecular biology enabled by the interface of DNA repair and replication with cancer	27
Corrigendum to “The gene: An appraisal” [Prog. Biophys. Mol. Biol. (2021) 46–62]	26
Clinical significance of circulating tumor cell (CTC)-specific microRNA (miRNA) in breast cancer	25

Origin of life: Drawing the big picture	25
The cancer puzzle: Welcome to organicism	25
Static magnetic field: A potential tool of controlling stem cells fates for stem cell therapy in osteoporosis	24
Optical studies of membrane state during action potential propagation	24
An Overview	23
Exploring different computational approaches for effective diagnosis of breast cancer	22
The multiple biological roles of the cholinesterases	21
A systematic review and repeatability study on the use of deep learning for classifying and detecting tuberculosis bacilli in microscopic images	21
Time delay during the proton tunneling in the base pairs of the DNA double helix	21
Consciousness, embodied Quantum Entanglement	21
Amyloid oligomers and their membrane toxicity - A perspective study	20
Editorial Board	20
An effective human uracil-DNA glycosylase inhibitor targets the open pre-catalytic active site conformation	20
Computational approaches for modeling and structural design of biological systems: A comprehensive review	20
Long non-coding RNAs (lncRNAs) in hepatocellular carcinoma progression: Biological functions and new therapeutic targets	20
Cyclic nucleotide signaling and pacemaker activity	19
The quantum cell	18
A special role for the genotype? Some comments on Keith Baverstock: “The gene: An appraisal”	18
The gene: An appraisal	17
Trees suck. Notes on the physics of transpiration in trees	17
The important consequences of the reversible heat production in nerves and the adiabaticity of the action potential	17
DNA replication stress and emerging prospects for PARG inhibitors in ovarian cancer therapy	17
Responses to commentaries on “The gene: An appraisal”	17
The holism of cosmology and consciousness	17
Cellular metabolism and colloids: Realistically linking physiology and biological physical chemistry	17
A systematic review of artificial intelligence-based COVID-19 modeling on multimodal genetic information	17
Appreciation of Sir Tom Blundell	16
From information to physics to biology	16
Cellular and organismal agency – Not based on genes: A comment on Baverstock	16
Different methods, techniques and their limitations in protein structure prediction: A review	16
Action potential alterations induced by single F11 neuronal cell loading	16
Correspondence insights into the role of genes in cell functionality. Comments on “The gene: An appraisal” by K. Baverstock	16
Decrypting the mechanistic basis of CRISPR/Cas9 protein	15
Do plants pay attention? A possible phenomenological-empirical approach	15
Music, cells and the dimensionality of nature	15
DNA microcircles - The promising tool for in vivo studies of the behavior of non-canonical DNA	15
Exploring the human cerebral cortex using confocal microscopy	15
Roles of ATM and ATR in DNA double strand breaks and replication stress	15
m6A methylation regulators and ncRNAs in osteosarcoma: Potential therapeutic strategies	15
Universality and diversity in living systems	15
Editorial Board	14
The biological effects of radiation-induced liver damage and its natural protective medicine	14
Xanthohumol: An underestimated, while potent and promising chemotherapeutic agent in cancer treatment	14
Exploring gene regulation and biological processes in insects: Insights from omics data using gene regulatory network models	14
Smartphone-based diagnostics for biosensing infectious human pathogens	14
WITHDRAWN: Long non-coding RNA RP5-821D11.7 promotes proliferation, migration, and epithelial-mesenchymal transition in glioma and glioma stem-like cells	13
HCN1 channels: A versatile tool for signal processing by primary sensory neurons	13
The Gene: An appraisal	13
Advances in the synthesis and application of self-assembling biomaterials	13
Tumour-regulatory role of long non-coding RNA HOXA-AS3	13

The epigenetic basis of evolution	12
Optical clearing in cardiac imaging: A comparative study	12
Review of historic article: Ebashi, S & Endo, M. 1968 Calcium Ion and Muscle Contraction. Progress in Biophysics and Molecular Biology, 18, 123–183	12
FTIR based approach to study EnaC mechanosensory functions	12
Targeting SARS-CoV-2 Nsp3 macrodomain structure with insights from human poly(ADP-ribose) glycohydrolase (PARG) structures with inhibitors	12
Editorial Board	12
Recent advancements to engineer mesenchymal stem cells and their extracellular vesicles for targeting and destroying tumors	12
Regulation of sinus node pacemaking and atrioventricular node conduction by HCN channels in health and disease	12
Roles of ATM and ATR in DNA double strand breaks and replication stress	12
Virtual article collection on infectious diseases	12
Recent progress of mechanosensitive mechanism on breast cancer	12
Treasuring the computational approach in medicinal plant research	11
Further illusions: On key evolutionary mechanisms that could never fit with Modern Synthesis	11
Pacemaker activity and ion channels in the sinoatrial node cells: MicroRNAs and arrhythmia	11
Editorial Board	11
The genetic control paradigm in biology: What we say, and what we are entitled to mean	11
The main sources of molecular organization in the cell. Atlas of self-organized and self-regulated dynamic biostructures	11
Modelling DNA damage-repair and beyond	11
FOXI1 inhibits gastric cancer cell proliferation by activating miR-590/ATF3 axis via integrating ChIP-seq and RNA-seq data	11
Instrumented nanoindentation in musculoskeletal research	10
The effect of magnetic fields on tumor occurrence and progression: Recent advances	10
The electron as a self-organising entity in physics and biology	10
Biophysical mechanisms underlying the effects of static magnetic fields on biological systems	10
Editorial Board	10
The first resolution revolution in protein structure analysis: X-ray diffraction of polypeptide conformations and globular protein folds in 1950s and 1960s	10
Expansion light sheet fluorescence microscopy of extended biological samples: Applications and perspectives	10
Kinetic modelling of voltage-dependent gating in funny channels	10
Reversibility of excitation waves in brain and heart and the energy of interfacial water. Can reversibility be explained by it?	9
Something’s gotta give: How PCNA alters its structure in response to mutations and the implications on cellular processes	9
A quantitative approach relating emergent features of complex traits to protein expression	9
The value of treating cancer as an evolutionary disease	9
Regulation of sinoatrial funny channels by cyclic nucleotides: From adrenaline and IK2 to direct binding of ligands to protein subunits	9
Shock and detonation waves at an interface and the collision of action potentials	9
The surprising heart revisited: an early history of the funny current with modern lessons	9
Advances in the understanding of protein misfolding and aggregation through molecular dynamics simulation	9
A review on mechanobiology of cell adhesion networks in different stages of sporadic colorectal cancer to explain its tumorigenesis	8
Beyond pacemaking: HCN channels in sinoatrial node function	8
How an emergent cosmology of a nonlocally unified, meaningfully in-formed and holographically manifested Universe can underpin and frame the biological embodiment of quantum entanglement	8
The funny current in genetically modified mice	8
f/HCN channels: From a tiny current controlling cardiac pacemaking to a pleiotropic current all over the body	8
Editorial Board	8
An overview of the intracellular localization of high-Z nanoradiosensitizers	8
A common pathway to cancer: Oncogenic mutations abolish p53 oscillations	8
Review of historic article: Butler, J.A.V., Johns, E.W. and Philips, D. M. P. 1968. Recent investigations on histones and their functions. Progress in Biophysics and molecular biology, 18, 209–244,	8
Review of historic article: Huxley 1957 Muscle Structure and theories of contraction. Progress in Biophysics and biophysical chemistry, 7, 255–318.	8
Targeting cell-matrix interface mechanobiology by integrating AFM with fluorescence microscopy	8
Mathematical and physical considerations indicating that the cell genome is a read-write memory	7
The mobius strip, the cell, and soft logic mathematics	7
Editorial Board	7
What prevents mainstream evolutionists teaching the whole truth about how genomes evolve?	7
Fragment- and structure-based drug discovery for developing therapeutic agents targeting the DNA Damage Response	7
Exosomes in bone remodeling and breast cancer bone metastasis	7
TUDCA receptors and their role on pancreatic beta cells	7
In vitro study of the expression of autophagy genes ATG101, mTOR and AMPK in breast cancer with treatment of lactoferrin and in silico study of their communication networks and protein interactions	6
Evolution, gravity, and the topology of consciousness	6
Innovations in ex vivo Light Sheet Fluorescence Microscopy	6
The role of Actopaxin in tumor metastasis	6
Commentary on “A systematic review on machine learning and deep learning techniques in cancer survival prediction”: Validation of survival methods	6
Editorial for online collection — The gene: An appraisal	6
Ih from synapses to networks: HCN channel functions and modulation in neurons	6
Fluorescence tissue microscopy	6
Inosine and its methyl derivatives: Occurrence, biogenesis, and function in RNA	6
Development as explanation: Understanding phenotypic stability and variability after the failure of genetic determinism	5
Promising application of pulsed electromagnetic fields on tissue repair and regeneration	5
Sound pulses in lipid membranes and their potential function in biology	5
A review of regulated self-organizing approaches for tissue regeneration	5
What can evolutionary biology learn from cancer biology?	5
Editorial Board	5
Two-phased evolution: Genome chaos-mediated information creation and maintenance	5
Autophagy and kidney aging	5
A review on salt-induced DNA compaction and charge inversion	5
It's clearly the heart! Optical transparency, cardiac tissue imaging, and computer modelling	5
Vinculin: A new target for the diagnosis and treatment of disease	5
Why death and aging ? All memories are imperfect	5
Identification and diagnosis of long COVID-19: A scoping review	5
Integration of mechanics and biology in computer simulation of bone remodeling	5
An insight to the recent advancements in detection of Mycobacterium tuberculosis using biosensors: A systematic review	5
Family Constellation therapy: A nascent approach for working with non-local consciousness in a therapeutic container	5
Biological effects of rotating magnetic field: A review from 1969 to 2021	5
Cold snapshots of DNA repair: Cryo-EM structures of DNA-PKcs and NHEJ machinery	5

Infrared neural stimulation at different wavelengths and pulse shapes	4
Shannon's (informational) dissipation as the major engine leading to living dynamic and the origin of self.	4
Editorial Board	4
Uncovering DNA-PKcs ancient phylogeny, unique sequence motifs and insights for human disease	4
The HCN channel as a pharmacological target: Why, where, and how to block it	4
The role of quantum mechanics in cognition-based evolution	4
Cellular evolution of language	4
A hypothesis of teleological evolution, via endogenous acetylcholine, nitric oxide, and calmodulin pathways	4
Reverting to single-cell biology: The predictions of the atavism theory of cancer	4
Autonomic modulation of sinoatrial node: Role of pacemaker current and calcium sensitive adenylyl cyclase isoforms	4
Protein folding, cellular stress and cancer	4
Mesoscale microscopy and image analysis tools for understanding the brain	4
Towards solving the mystery of spiral phyllotaxis	4
From straight to curved: A historical perspective of DNA shape	4