Soil Biology & Biochemistry

Papers
(The median citation count of Soil Biology & Biochemistry is 8. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-03-01 to 2025-03-01.)
ArticleCitations
Dual isotopic (33P and 18O) tracing and solution 31P NMR spectroscopy to reveal organic phosphorus synthesis in organic soil horizons572
Impact of grassland afforestation with contrasting tree species on soil phosphorus fractions and alkaline phosphatase gene communities400
The unexplored role of preferential flow in soil carbon dynamics393
Comparing plant litter molecular diversity assessed from proximate analysis and 13C NMR spectroscopy207
Termite bioturbation: Fungal versus non-fungal building strategies lead to different soil sheeting stability170
Warming shifts the biomass distribution of soil microarthropod communities168
Tree species richness increases spatial variation but not overall wood decomposition151
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Depth-dependent driver of global soil carbon turnover times134
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Obituary127
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Termite graveyards. Hidden geochemical patches?111
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Obituary : Clive Arthur Tudor Edwards - 16 June 1925–20 July 2021102
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Normalizing time in terms of space: What drives the fate of spring thaw-released nitrogen in a sloping Arctic landscape?100
A microbial-explicit model with comprehensive nitrogen processes to quantify gaseous nitrogen production from agricultural soils100
Earthworms as conveyors of mycorrhizal fungi in soils98
Limited effects of century-old biochar on taxonomic and functional diversities of collembolan communities across land-uses98
Drying-rewetting of permanent pasture and agricultural soils induces a shift towards microbial use of more C-rich organic matter97
Decoupled responses of leaf and root decomposition to nutrient deposition in a subtropical plantation97
Tracing sources and turnover of soil organic matter in a long-term irrigated dry forest using a novel hydrogen isotope approach94
Susceptibility of new soil organic carbon to mineralization during dry-wet cycling in soils from contrasting ends of a precipitation gradient93
Top-down effects on biological soil crust function88
Belowground responses to altered precipitation regimes in two semi-arid grasslands88
Will a legacy of enhanced resource availability accelerate the soil microbial response to future climate change?87
Biochar strategy for long-term N2O emission reduction: Insights into soil physical structure and microbial interaction84
Distinct N-cycling microbial communities contribute to microtopographic variation in soil N2O emissions from denitrification84
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Deepened snow in combination with summer warming increases growing season nitrous oxide emissions in dry tundra, but not in wet tundra82
Forest dieback switches the relationships between microfaunal bacterivore guilds and soil nutrients81
Testing microbial models with data from a 14C glucose tracer experiment81
Aligning theoretical and empirical representations of soil carbon-to-nitrogen stoichiometry with process-based terrestrial biogeochemistry models78
Mitigating generative AI inaccuracies in soil biology77
Seasonal changes in soil biofilm microbial communities75
Sequestration of soil carbon by burying it deeper within the profile: A theoretical exploration of three possible mechanisms74
Investigating drivers of free-living diazotroph activity in paddy soils across China72
Microbial “hotspots” of organic matter decomposition in temperate peatlands are driven by local spatial heterogeneity in abiotic conditions and not by vegetation structure72
Short-term soil fungal community dynamics following fire in mediterranean climate-type banksia woodlands72
Resistance of microbial community and its functional sensitivity in the rhizosphere hotspots to drought71
The positive role of root decomposition on the bioremediation of organic pollutants contaminated soil: A case study using PCB-9 as a model compound71
Litter mixture effects on nitrogen dynamics during decomposition predominantly vary among biomes but little with litter identity, diversity and soil fauna71
From diversity to complexity: Microbial networks in soils70
Abundant and rare fungal taxa exhibit different patterns of phylogenetic niche conservatism and community assembly across a geographical and environmental gradient69
Biochar application differentially affects soil micro-, meso-macro-fauna and plant productivity within a nature restoration grassland69
Global prediction of soil microbial growth rates and carbon use efficiency based on the metabolic theory of ecology69
Tree species richness and N-fixing tree species enhance the chemical stability of soil organic carbon in subtropical plantations69
Cropping system modulates the effect of spring drought on ammonia-oxidizing communities68
Higher free-living N2 fixation at rock-soil interfaces than topsoils during vegetation recovery in karst soils68
Disentangling the abiotic and biotic components of AMF suppressive soils67
Can moisture affect temperature dependences of microbial growth and respiration?67
Aridity and NPP constrain contribution of microbial necromass to soil organic carbon in the Qinghai-Tibet alpine grasslands65
Impact of common sample pre-treatments on key soil microbial properties63
Shaping of soil microbial communities by plants does not translate into specific legacy effects on organic carbon mineralization63
Stoichiometric imbalance and microbial community regulate microbial elements use efficiencies under nitrogen addition63
Effect of rice (Oryza sativa L.) genotype on yield: Evidence from recruiting spatially consistent rhizosphere microbiome62
Casing soil microbiome mediates suppression of bacterial blotch of mushrooms during consecutive cultivation cycles62
Response of soil microbial communities to mixed beech-conifer forests varies with site conditions61
What drives leaf litter decomposition and the decomposer community in subtropical forests – The richness of the above-ground tree community or that of the leaf litter?60
Protists modulate fungal community assembly in paddy soils across climatic zones at the continental scale59
Importance of microbial communities at the root-soil interface for extracellular polymeric substances and soil aggregation in semiarid grasslands59
Trophic interrelationships drive the biogeography of protistan community in agricultural ecosystems59
Spatially-distributed microbial enzyme activities at intact, coated macropore surfaces in Luvisol Bt-horizons59
Soil bacterial community functions and distribution after mining disturbance58
Amino acid isotopes in functional assemblages of Collembola reveal the influence of vertical resource heterogeneity and root energy supply on trophic interactions in soil food webs58
Measurements of fine root decomposition rate: Method matters57
Polar soils exhibit distinct patterns in microbial diversity and dominant phylotypes57
Adaptation of soil micro-food web to elemental limitation: evidence from the forest-steppe ecotone57
A meta-analysis of phosphatase activity in agricultural settings in response to phosphorus deficiency57
Long-term regional evidence of the effects of livestock grazing on soil microbial community structure and functions in surface and deep soil layers56
Canonical ammonia oxidizers, rather than comammox Nitrospira, dominated autotrophic nitrification during the mineralization of organic substances in two paddy soils56
Direction and magnitude of the change in water content between two periods influence soil respiration, microbial biomass and nutrient availability which can be modified by intermittent air-drying56
Phosphorus fertiliser source determines the allocation of root-derived organic carbon to soil organic matter fractions56
Seasonality drives microbiome composition and nitrogen cycling in soil below biocrusts55
Nitrogen limitation of microbial activity in alpine tundra soils along an environmental gradient: Intra-seasonal variations and effect of rising temperature55
Evidence for a genetic basis in functional trait tradeoffs with microbial growth rate but not growth yield55
Biochar with large specific surface area recruits N2O-reducing microbes and mitigate N2O emission55
Within-species plant phylogeny drives ectomycorrhizal fungal community composition in tree roots along a timberline54
Specific utilization of biopolymers of plant and fungal origin reveals the existence of substrate-specific guilds for bacteria in temperate forest soils54
How the Birch effect differs in mechanisms and magnitudes due to soil texture54
Increasing plant species diversity enhances microbial necromass carbon content but does not alter its contribution to soil organic carbon pool in a subtropical forest54
The soil microbial community and plant biomass differentially contribute to the retention and recycling of urinary-N in grasslands54
Earthworms facilitate stabilization of both more-available maize biomass and more-recalcitrant maize biochar on mineral particles in an agricultural soil53
Iron oxidation coupled with nitrate reduction affects the acetate-assimilating microbial community structure elucidated by stable isotope probing in flooded paddy soil52
Dynamics of root–microbe interactions governing crop phosphorus acquisition after straw amendment52
Functional trait variation and community-weighted means of tree traits can alter soil microbial biomass and community composition51
Mycorrhizal fungi-mediated uptake of tree-derived nutrients by crops – the role of tree-maintained versus crop-associated fungal mycelia51
Response of soil organic carbon decomposition to intensified water variability co-determined by the microbial community and aggregate changes in a temperate grassland soil of northern China51
A pulse of simulated root exudation alters the composition and temporal dynamics of microbial metabolites in its immediate vicinity51
Bacterial community response to environmental change varies with depth in the surface soil51
N2 fixation per unit microbial biomass increases with aridity51
Drought accentuates the role of mycorrhiza in phosphorus uptake51
Stabilized microbial necromass in soil is more strongly coupled with microbial diversity than the bioavailability of plant inputs50
Increase of temperature exacerbates the conversion of P fractions in organic horizon50
Number of global change factors alters plant-soil feedbacks via its effect on soil fungal communities50
Intercropping with legumes alleviates soil N limitation but aggravates P limitation in a degraded agroecosystem as shown by ecoenzymatic stoichiometry49
Dominant herbaceous plants contribute to the spatial heterogeneity of beech and riparian forest soils by influencing fungal and bacterial diversity49
Poly(L-lactide) mineralisation under environmental conditions is enhanced in earthworm guts49
Arbuscular mycorrhizal fungi associated with alpine meadow multifunctionality in a warmer climate with variable precipitation49
The influence of forest-to-cropland conversion on temperature sensitivity of soil microbial respiration across tropical to temperate zones49
Fourteen-year field experiment reveals neutral effects of N and P deposition on abundance and stoichiometric traits of the earthworm Pontoscolex corethrurus in tropical plantations49
Phase transformation of schwertmannite changes microbial iron and sulfate-reducing processes in flooded paddy soil and decreases arsenic accumulation in rice (Oryza sativa L.)48
Spatial substrate heterogeneity limits microbial growth as revealed by the joint experimental quantification and modeling of carbon and heat fluxes48
Increased soil organic carbon response to fertilization is associated with increasing microbial carbon use efficiency: Data synthesis48
Virome responses to heating of a forest soil suggest that most dsDNA viral particles do not persist at 90°C48
Contributions of microbial necromass and plant lignin to soil organic carbon stock in a paddy field under simulated conditions of long-term elevated CO2 and warming47
Nitrate-induced hydroxyl radical releases deep soil organic carbon by opening the ‘enzyme latch’ under micro-aerobic conditions47
Tree species-dependent effects of urbanization and plant invasion on deadwood biota and decomposition rates47
A rhizosphere effect promotes the persistence of gas oxidization activity in soil47
Keystone bacterial functional module activates P-mineralizing genes to enhance enzymatic hydrolysis of organic P in a subtropical forest soil with 5-year N addition46
Soil bacterial and fungal communities show within field heterogeneity that varies by land management and distance metric46
Methane flux from transplanted soil monoliths depends on moisture, but not origin45
Scaling up taxon-specific microbial traits to predict community-level microbial activity in agricultural systems45
Iron–organic carbon associations stimulate carbon accumulation in paddy soils by decreasing soil organic carbon priming45
Altered rainfall greatly affects enzyme activity but has limited effect on microbial biomass in Australian dryland soils45
Short-term toxicity assessment of a triazine herbicide (terbutryn) underestimates the sensitivity of soil microorganisms45
Niche differentiation of bacteria and fungi in carbon and nitrogen cycling of different habitats in a temperate coniferous forest: A metaproteomic approach45
Are carbon-storing soils more sensitive to climate change? A laboratory evaluation for agricultural temperate soils45
Strong rhizosphere priming effects on N dynamics in soils with higher soil N supply capacity: The ‘Matthew effect’ in plant-soil systems45
Biogeography of soil protistan consumer and parasite is contrasting and linked to microbial nutrient mineralization in forest soils at a wide-scale44
New insights into the patterns of ecoenzymatic stoichiometry in soil and sediment44
Nitrogen addition slows litter decomposition accompanied by accelerated manganese release: A five-year experiment in a subtropical evergreen broadleaf forest44
Soil fungal community and mating type development of Tuber melanosporum in a 20-year chronosequence of black truffle plantations44
Oxygen gas derived oxygen does not affect the accuracy of 18O-labelled water approach for microbial carbon use efficiency43
Invasive Spartina alterniflora accelerates soil gross nitrogen transformations to optimize its nitrogen acquisition in an estuarine and coastal wetland of China43
Opportunities and limits in imaging microorganisms and their activities in soil microhabitats43
Globally nitrogen addition alters soil microbial community structure, but has minor effects on soil microbial diversity and richness43
Ephemeral microbial responses to pulses of bioavailable carbon in oxic and anoxic salt marsh soils42
Rice root Fe plaque enhances oxidation of microbially available organic carbon via Fe(III) reduction-coupled microbial respiration42
Mosses stimulate soil carbon and nitrogen accumulation during vegetation restoration in a humid subtropical area42
Biological denitrification inhibition (BDI) on nine contrasting soils: An unexpected link with the initial soil denitrifying community42
Microbial transformation mechanisms of particulate organic carbon to mineral-associated organic carbon at the chemical molecular level: Highlighting the effects of ambient temperature and soil moistur41
Aridity thresholds of microbiome-soil function relationship along a climatic aridity gradient in alpine ecosystem41
The effects of cadmium-copper stress on the accumulation of antibiotic-resistance genes in soil and pakchoi leaves41
Study of soil heterotrophic respiration as a function of soil moisture under different land covers41
Shifts in C-degradation genes and microbial metabolic activity with vegetation types affected the surface soil organic carbon pool41
An optimised molecular-based method for ecological study of tardigrades in soils40
Experimental evidence that poor soil phosphorus (P) solubility typical of drylands due to calcium co-precipitation favors autonomous plant P acquisition over collaboration with mycorrhizal fungi40
The importance of rare versus abundant phoD-harboring subcommunities in driving soil alkaline phosphatase activity and available P content in Chinese steppe ecosystems39
The influence of soil development on the depth distribution and structure of soil microbial communities39
Nitrogen deposition stimulates decomposition via changes in the structure and function of litter food webs39
The mechanisms underpinning microbial resilience to drying and rewetting – A model analysis39
The role of the soil microbiome in the colonisation of glacier forefields by Antarctic pearlwort (Colobanthus quitensis) under current and future climate change scenarios39
Root traits explain multitrophic interactions of belowground microfauna on soil nitrogen mineralization and plant productivity39
The effects of tree-mycorrhizal type on soil organic matter properties from neighborhood to watershed scales39
Distribution of phosphorus cycling genes across land uses and microbial taxonomic groups based on metagenome and genome mining39
Energy flux across multitrophic levels drives ecosystem multifunctionality: Evidence from nematode food webs39
Organic amendments, deficit irrigation, and microbial communities impact extracellular polysaccharide content in agricultural soils38
The path less taken: Long-term N additions slow leaf litter decomposition and favor the physical transfer pathway of soil organic matter formation38
Organic and inorganic sulfur and nitrogen uptake by co-existing grassland plant species competing with soil microorganisms38
Heterotrophic nitrification – An eternal mystery in the nitrogen cycle38
Microbial substrate stoichiometry governs nutrient effects on nitrogen cycling in grassland soils38
Deepened snow cover accelerates litter decomposition by stimulating microbial degradation38
Long-term N inputs shape microbial communities more strongly than current-year inputs in soils under 10-year continuous corn cropping38
Seed treatment with plant-defense elicitors decreases the abundance of ammonia oxidizers associated with winter wheat roots37
A synthesis of soil organic carbon mineralization in response to biochar amendment37
Estimating the temperature optima of soil priming37
Microbial organic matter reduction regulates methane and carbon dioxide production across an ombrotrophic-minerotrophic peatland gradient37
Carbon acquisition ecological strategies to connect soil microbial biodiversity and carbon cycling37
The nitrogen gap in soil health concepts and fertility measurements36
Biocrusts drive soil respiration across seasons and depths in a cold-winter desert36
Nitrogen-15 natural abundance is robust to quantify nitrogen transfer from clover to grass in temporary grassland36
Soil nutrient conditions alter viral lifestyle strategy and potential function in phosphorous and nitrogen metabolisms36
Vegetation transition from meadow to forest reduces priming effect on SOM decomposition36
Altered litter stoichiometry drives energy dynamics of food webs through changing multiple facets of soil biodiversity36
Anaerobic oxidation of methane mitigates net methane production and responds to long-term experimental warming in a northern bog35
No effect of long-term soil warming on diffusive soil inorganic and organic nitrogen fluxes in a temperate forest soil35
Deepened snow enhances gross nitrogen cycling among Pan-Arctic tundra soils during both winter and summer35
Phosphorus - A key element determining nitrous oxide emissions from boreal cultivated peat soil35
Rhizosphere effects of woody plants on soil biogeochemical processes: A meta-analysis35
Responses of root architecture and the rhizosphere microbiome assembly of maize (Zea mays L.) to a soil texture gradient34
Decadal application of mineral fertilizers alters the molecular composition and origins of organic matter in particulate and mineral-associated fractions34
Wildland fire ash enhances short-term CO2 flux from soil in a Southern African savannah34
Effects of microplastics on plant growth and arbuscular mycorrhizal fungal communities in a soil spiked with ZnO nanoparticles34
D genome acquisition and breeding have had a significant impact on interaction of wheat with ACC deaminase producers in soil or ACC deaminase potential activity in the rhizosphere34
Seasonality of gross ammonification and nitrification altered by precipitation in a semi-arid grassland of Northern China34
Microbial community dynamics during decomposition of insect exuviae and frass in soil33
Soluble phenols in litter are reduced during passage through the soil macrofauna gut due to the formation of insoluble complexes with proteins: A case study with isopods and Diptera larvae33
Threats to the soil microbiome from nanomaterials: A global meta and machine-learning analysis33
Differential effects of soil trophic networks on microbial decomposition activity in mountain ecosystems33
Revisiting process-based simulations of soil nitrite dynamics: Tighter cycling between nitrite and nitrate than considered previously33
Plant litter traits control microbial decomposition and drive soil carbon stabilization32
Phosphorus-mediated succession of microbial nitrogen, carbon, and sulfur functions in rice-driven saline-alkali soil remediation31
Legacy effects of rhizodeposits on soil microbiomes: A perspective31
Lithologic control of microbial-derived carbon in forest soils31
Arbuscular mycorrhizal fungi and goethite promote carbon sequestration via hyphal-aggregate mineral interactions31
Gross N transformations and plant N use efficiency in intensive vegetable production soils31
Linkages between the temperature sensitivity of soil respiration and microbial life strategy are dependent on sampling season30
Corrigendum to “Impact of nitrogen addition on plant-soil-enzyme C–N–P stoichiometry and microbial nutrient limitation” [Soil Biol. Biochem. 170 (2022) 108714]30
Drought mediates the response of soil fungal communities post-wildfire in a Californian grassland and coastal sage scrubland30
Chronic enhanced nitrogen deposition and elevated precipitation jointly benefit soil microbial community in a temperate forest30
Land use intensification homogenizes soil protist communities and alters their diversity across Europe30
Large-scale patterns and drivers of soil organic nitrogen depolymerization30
Pasture-crop rotations modulate the soil and rhizosphere microbiota and preserve soil structure supporting oat cultivation in the Pampa biome30
Revegetation promotes soil mineral-associated organic carbon sequestration and soil carbon stability in the Tengger Desert, northern China30
Life in the dark: Impact of future winter warming scenarios on carbon and nitrogen cycling in Arctic soils30
Corrigendum to “Nitrite-dependent anaerobic oxidation decreases methane emissions from peatlands” [Soil Biology and Biochemistry 169, 108658]30
Mechanisms behind high N2O emissions from livestock enclosures in Kenya revealed by dual-isotope and functional gene analyses30
Invasive plant-derived dissolved organic matter alters microbial communities and carbon cycling in soils30
Chemical identity of carbon substrates drives differences in denitrification and N2O reduction within agricultural soils29
VNIR and MIR spectroscopy of PLFA-derived soil microbial properties and associated soil physicochemical characteristics in an experimental plant diversity gradient29
Carbon stabilization pathways in soil aggregates during long-term forest succession: Implications from δ13C signatures29
Strong conditionality in plant-fungal community assembly after soil inoculation in post-agricultural grasslands29
Physical characterisation of chia mucilage polymeric gel and its implications on rhizosphere science - Integrating imaging, MRI, and modelling to gain insights into plant and microbial amended soils29
Co-symbiosis of arbuscular mycorrhizal fungi (AMF) and diazotrophs promote biological nitrogen fixation in mangrove ecosystems29
Soil sample sizes for DNA extraction substantially affect the examination of microbial diversity and co-occurrence patterns but not abundance29
Pool complexity and molecular diversity shaped topsoil organic matter accumulation following decadal forest restoration in a karst terrain29
Are enzymes transported in soils by water fluxes?29
Microbiome structure and interconnection in soil aggregates across conservation and conventional agricultural practices allow to identify main prokaryotic and fungal taxa related to soil functioning29
Community composition, and not species richness, of microbes influences decomposer functional diversity in soil29
Editorial Board29
Changes in soil bacterial and fungal community composition and functional groups during the succession of boreal forests29
Tree decline and mortality following pathogen invasion alters the diversity, composition and network structure of the soil microbiome29
Enlarging interface reverses the dominance of fungi over bacteria in litter decomposition29
Decoupling soil community structure, functional composition, and nitrogen metabolic activity driven by salinity in coastal wetlands28
Microbial metabolic capacity regulates the accrual of mineral-associated organic carbon in subtropical paddy soils28
Can heavy metal pollution stress reduce microbial carbon-use efficiencies?28
Dodder parasitism limited the effect of arbuscular mycorrhizal fungi on litter decomposition28
Different stochastic processes regulate bacterial and fungal community assembly in estuarine wetland soils28
Revising the dynamic energy budget theory with a new reserve mobilization rule and three example applications to bacterial growth28
Optimizing stand density for climate-smart forestry: A way forward towards resilient forests with enhanced carbon storage under extreme climate events28
Congruent changes in microbial community dynamics and ecosystem methane fluxes following natural drought in two restored fens28
A rapid and sensitive assay to quantify amino sugars, neutral sugars and uronic acid necromass biomarkers using pre-column derivatization, ultra-high-performance liquid chromatography and high-resolut28
Phosphorus addition ameliorates soil micro-food web simplification due to nitrogen enrichment but does not restore nematode community composition28
Predicting measures of soil health using the microbiome and supervised machine learning28
Comparative analysis of diversity and environmental niches of soil bacterial, archaeal, fungal and protist communities reveal niche divergences along environmental gradients in the Alps28
Biocrusts regulate the effect of rainfall pulses on soil respiration at different temporal scales on the Loess Plateau28
Nitrogen application influences the effect of bacteria on the belowground allocation of photosynthesized carbon under elevated CO227
Obituary: Philip Charles Brookes: 26th March 1951–28th September 202327
Magnetic enzyme-mimetic minerals with peroxidase-like activity can contribute to measured soil peroxidase activity27
Crop productivity, resource allocation and nitrogen concentration as affected by soil decomposers, mixed cropping and crop genotype27
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Clover increases N2O emissions in boreal leys during winter27
Soil fauna actively change their diet to survive stress27
Effects of copper contamination on N cycling microbial guilds and plant performance in two contrasting grassland soils27
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2D distribution of Pseudomonas fluorescens activities at the soil-root interface of sunflower grown on vineyard soils: Effects on copper uptake27
Biochar addition regulates soil and earthworm gut microbiome and multifunctionality26
Priming is frequently overestimated in studies using 14C-labelled substrates due to underestimation of 14CO2 activity26
Mutualistic interaction between arbuscular mycorrhiza fungi and soybean roots enhances drought resistant through regulating glucose exudation and rhizosphere expansion26
Divergent responses of soil microorganisms to throughfall exclusion across tropical forest soils driven by soil fertility and climate history26
Long-term warming-induced trophic downgrading in the soil microbial food web26
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