SIAM Journal on Applied Mathematics

Article	Citations
Detecting and Resetting Tipping Points to Create More HIV Post-Treatment Controllers with Bifurcation and Sensitivity Analysis	76
A Diffuse Interface Model for Cell Blebbing Including Membrane-Cortex Coupling with Linker Dynamics	49
Diffraction by a Right-Angled No-Contrast Penetrable Wedge Revisited: A Double Wiener--Hopf Approach	40
Modelling of Initially Stressed Solids: Structure of the Energy Density in the Incompressible Limit	39
Vaccinating According to the Maximal Endemic Equilibrium Achieves Herd Immunity	29
Analysis and Simulation of Plasmons on Graphene with Time- and Space-Dependent Drude Weight	25
The Role of Higher-Order Self-Dynamics in Neural Dynamical Networks: Preserving Memory Capacity and Enhancing Retrieval Basin	24
Addressing Complex Boundary Conditions of Miscible Flow and Transport in Two and Three Dimensions with Application to Optimal Control	23
Dissipation of Traffic Jams Using a Single Autonomous Vehicle on a Ring Road	23
An Integro-Differential Model of Cadmium Yellow Photodegradation	22
Wobbling of Pedestrian Bridges	19
High Spots for the Ice-Fishing Problem with Surface Tension	18
Reconstruction of an Interface Between the Fluid and Piezoelectric Solid by Acoustic Measurements	18
Mean-Field Approximation of Dynamics on Networks	17
Fast Solver for Diffusive Transport Times on Dynamic Intracellular Networks	16
Analysis and Simulation of a Nonlocal Gray–Scott Model	16
Acoustics of a Partially Partitioned Narrow Slit Connected to a Half-Plane: Case Study for Exponential Quasi-Bound States in the Continuum and their Resonant Excitation	15
Analysis of a Toy Model for Optimal Crop Protection	15
Generalized Schwarz Integral Formulas for Multiply Connected Domains	15
Time-Delay Impact on the Stability of Kinetic Systems Linearly Conjugated to Complex Balanced Chemical Reaction Networks	15
Nonlinear Monotone Energy Stability of Plane Shear Flows: Joseph or Orr Critical Thresholds?	14
Bound-Preserving Finite-Volume Schemes for Systems of Continuity Equations with Saturation	14
Spectral Diffusion of MMT Model with Condensate in Two or Higher Dimensions	14
Wave Propagation On a String Resting on a General Nonlinear Substrate	13
Large Deviations for Additive Functionals of Reflected Jump-Diffusions	13

Phase Transition in a Periodic Tubular Structure	13
Robustness of Solutions of Almost Every System of Equations	13
Critical Patch Size of a Two-Population Reaction Diffusion Model Describing Brain Tumor Growth	13
Maxwell’s Equations with Nonlinear Inhomogeneous Constitutive Relation: Guided Waves in a Film Filled with Inhomogeneous Kerr Medium	12
Two-Layer Flexural-Gravity Wave Propagation at a Blocking Point	12
Phase Reduction of Waves, Patterns, and Oscillations Subject to Spatially Extended Noise	12
Applications of Mathematical Programming to Genetic Biocontrol	12
Linear and Nonlinear Speed Selection for Traveling Waves in Quadratic Autocatalytic Systems with Complexing Agents	12
Incorporating Drug Adherence Stochasticity Into Pharmacokinetics and Pharmacodynamics to Understand the HIV Transmission Dynamics Through a MultiScale System	11
Selection Mechanism in Non-Newtonian Saffman–Taylor Fingers	11
Multiwindow Approaches for Direct and Stable STFT Phase Retrieval	11
Fixation Dynamics on Multilayer Networks	11
Pseudodifferential Models for Ultrasound Waves with Fractional Attenuation	11
A Two-Way Coupled Model of Visco-Thermo-Acoustic Effects in Photoacoustic Trace Gas Sensors	11
On a Spatial Mosquito-Borne Disease Model with Density-Dependent Dispersal	11
Effective Medium Theory for Time-Modulated Subwavelength Resonators	10
Modeling Spatial Waves of Wolbachia Invasion for Controlling Mosquito-Borne Diseases	10
Existence and Stability of a Boundary Layer with an Interior Spike in the Singularly Perturbed Shadow Gierer–Meinhardt System	10
Evolution of Derivative Singularities in Hyperbolic Quasilinear Systems of Conservation Laws	10
An Exact Stochastic Simulation Method for Fractional Order Compartment Models	10
Geometry-Based Approximation of Waves in Complex Domains	10
Jacobi Processes with Jumps as Neuronal Models: A First Passage Time Analysis	10
Iteratively Adaptive Identification of Parameters Solely Using Short-Term Data of Transient Dynamics	10
Bifurcation Analysis in a Tumor-Immune System Interaction Model with Dendritic Cell Therapy and Immune Response Delay	10
Ellipsoidal Embeddings of Graphs	10
Singularities of Capillary-Gravity Waves on Dielectric Fluid Under Normal Electric Fields	9
Dynamic Behaviors of a Periodic System with Threshold Policy-Guided Periodic and Intermittent Therapy of Tumor	9
Calculation of Expected Reward Rate in a Two-Alternative Decision Process	9
Dynamics of a Reaction-Diffusion SIS Epidemic Model with a Control Zone	9
Wasserstein Hamiltonian Flow with Common Noise on Graph	9
Asymptotic and Transient Dynamics of a Stoichiometric Algal Growth Model with Two-Stage Phosphate Uptake	9
Extreme First Passage Times for Populations of Identical Rare Events	9
Conservation Laws with Nonlocal Velocity: The Singular Limit Problem	9
Recovery of the Order of Derivation for Fractional Diffusion Equations in an Unknown Medium	9
Neural Fields and Noise-Induced Patterns in Neurons on Large Disordered Networks	9
Computation of Riesz \(\boldsymbol{\alpha }\)-Capacity \(\boldsymbol{\textrm{C}}_{\boldsymbol{\alpha}}\) of General Sets in \(\boldsymbol{\mathbb{R}}^{\boldsymbol{d}}\) Using Stable Random Walks	9
Evolutionary Attractors in the Chemostat Model	9
Shape Taylor Expansion for Wave Scattering Problems	8
Fourier Representation of the Diffusion MRI Signal Using Layer Potentials	8
Parametric Resonance for Enhancing the Rate of Metastable Transition	8
Mathematical Models for Nonlinear Ultrasound Contrast Imaging with Microbubbles	8
On an Inverse Problem of the Generalized Bathtub Model of Network Trip Flows	8
Slow Migration of Brine Inclusions in First-Year Sea Ice	8
Tristability and Elite Control in an HIV Infection Model with Natural Killer Cells Effect and Immune Impairment	8
Electromagnetic Waves Generated by a Hybrid Dielectric-Plasmonic Dimer	8
Simultaneous Determination of Wave Speed, Diffusivity, and Nonlinearity in the Westervelt Equation Using Complex Time-Periodic Solutions	8
Quasi-three-dimensional Viscous Steady Streaming in a Rectangular Channel past a Cylinder	8
The Impact of Fear and Behavior Response to Established and Novel Diseases	7
Asymptotic Relaxation of Moment Equations for a Multi-species, Homogeneous BGK Model	7
Accumulation Time of Diffusion in a 3D Singularly Perturbed Domain	7

Classifying Minimum Energy States for Interacting Particles: Spherical Shells	7
Fractal and Hurst Effects in Solenoidal and Irrotational Vector Random Fields	7
Passive Inverse Obstacle Scattering Problems for the Helmholtz Equation	7
First Passage Time of Loop Formation in Chromatin Chains	7
Dirac Points for the Honeycomb Lattice with Impenetrable Obstacles	7
Constitutive Relations for Granular Flow That Include the Three Flow Regimes of Chialvo et al.	7
Wearable Data Assimilation to Estimate the Circadian Phase	7
Bifurcation-Induced Species Coexistence in a Stage-Structured Intraguild Predation Model	6
Tangential Cone Condition for the Full Waveform Forward Operator in the Viscoelastic Regime: The Nonlocal Case	6
Frame Hydrodynamics of Biaxial Nematics from Molecular-Theory-Based Tensor Models	6
A Conservation Law for Evolving Borehole Geometry in Drilling	6
Uniform Asymptotic Approximations for the Phase Plane Trajectories of the SIR Model with Vital Dynamics	6
Continuous and Discrete Baroclinic Modes in Continuously Varying Stratification	6
Optimal Epidemic Control by Social Distancing and Vaccination of an Infection Structured by Time Since Infection: The COVID-19 Case Study	6
Identification of Nonconcave Aggregate Production Functions in Spatial Solow Models with Technology Diffusion	6
Sliding-Mode Theory Under Feedback Constraints and the Problem of Epidemic Control	6
Simultaneous Reconstruction of Optical and Acoustical Properties in Photoacoustic Imaging Using Plasmonics	6
The KP Equation of Plane Elastodynamics	6
Viscous Regularization of the MHD Equations	6
Instability of Hysteretic Phase Interfaces in a Mean-Field Model with Inhomogeneities	6
Linearized Calderón Problem: Reconstruction of Unbounded Perturbations in Three Dimensions	6
Dissipative Dynamics of Volterra Disclinations	6
Modularity Maximization for Graphons	6
Resource-Driven Pattern Formation in Consumer-Resource Systems with Asymmetric Dispersal on a Plane	6
Local Bifurcation Analysis of Circular von-Kármán Plate with Kirchhoff Rod Boundary	6
The Behavior of the Direct Current Density at the Edge of Electrodes	6
Signal Reconstruction from Phase-Only Measurements: Uniqueness Condition, Minimal Measurement Number and Beyond	6
On the Identifiability of Nonlocal Interaction Kernels in First-Order Systems of Interacting Particles on Riemannian Manifolds	5
Local Perception and Learning Mechanisms in Resource-Consumer Dynamics	5
Modeling Floral and Arthropod Electrostatics Using a Two-Domain AAA-Least Squares Algorithm	5
The Carleman Contraction Mapping Method for a Coefficient Inverse Problem of the Epidemiology	5
Connecting GANs, Mean-Field Games, and Optimal Transport	5
Coarse-Grained Stochastic Model of Myosin-Driven Vesicles into Dendritic Spines	5
Modeling and Optimal Control of a Two-Species Bioproducing Microbial Consortium	5
Tipping Points in Seed Dispersal Mutualism Driven by Environmental Stochasticity	5
The Repulsion Property in Nonlinear Elasticity and a Numerical Scheme to Circumvent It	5
Finite Amplitude Analysis of Poiseuille Flow in Fluid Overlying Porous Domain	5
Optimal Stochastic Control Problem for a Carbon Emission Reduction Process	5
Inference of Interaction Kernels in Mean-Field Models of Opinion Dynamics	5
Agro-Ecological Control of a Pest-Host System: Preventing Spreading	5
Generic Convergence to Periodic Orbits for Monotone Flows with Respect to 2-Cones and Applications to SEIRS Models	5
Path Integration and the Structural Sensitivity Problem in Partially Specified Biological Models	5
Far-from-Equilibrium Traveling Pulses in Sloped Semiarid Environments Driven by Autotoxicity Effects	5
Apodizer Design to Efficiently Couple Light into a Fiber Bragg Grating	5
Analysis of the Lévy Flight Foraging Hypothesis in \(\mathbb{R}^{n}\) and Unreliability of the Most Rewarding Strategies	5
Global Dynamics and Pattern Formation in a Diffusive Population-Toxicant Model with Negative Toxicant-Taxis	5
Fast Anthropogenic Environmental Change Can Cause the Collapse of Fishery Ecosystems	5
A Continuous Integral Model for White Blood Cell Production	5
Inverse Source Problems for the Stochastic Wave Equations: Far-Field Patterns	5
Pattern Formation and Oscillations in Nonlinear Random Walks on Networks	5
Localization of Moving Sources: Uniqueness, Stability, and Bayesian Inference	5
Mean Field Analysis of Hypergraph Contagion Models	5
An Inversion Scheme for Elastic Diffraction Tomography Based on Mode Separation	5
Bayesian Experimental Design for Head Imaging by Electrical Impedance Tomography	4
Splitting Reactions Preserves Nondegenerate Behaviors in Chemical Reaction Networks	4
An Efficient Model For Scaffold Mediated Bone Regeneration	4
Normal Forms, Differentiable Conjugacies, and Elementary Bifurcations of Maps	4
Geometric Theory of Distribution Shapes for Autoregulatory Gene Circuits	4
On Spatial Cohesiveness of Second-Order Self-Propelled Swarming Systems	4
Near-Exact Radiating Fins via Boundary Tracing	4
Mathematical Justifications of Dipolar Resonances with Hard Inclusions Embedded in a Soft Elastic Material	4
Sparse Optimal Control of Pattern Formations for an SIR Reaction-Diffusion Epidemic Model	4
Design and Control of Quasiperiodic Patterns of Particles with Standing Acoustic Waves	4
A Chemostat Model with Variable Dilution Rate Due to Biofilm Growth	4
Exact Switching Time Distributions for Autoregulated Gene Expression Models with mRNA and Protein Descriptions	4
Scaling Limit of the Kuramoto Model on Random Geometric Graphs	4
The Beavers--Joseph Interface Boundary Condition is Well Approximated by the Beavers--Joseph--Saffman--Jones Interface Boundary Condition	4
Computational Translation Framework Identifies Biochemical Reaction Networks with Special Topologies and Their Long-Term Dynamics	4
Discrete Inverse Method for Extracting Disease Transmission Rates from Accessible Infection Data	4
Multiplicity of Endemic Equilibria for a Diffusive SIS Epidemic Model with Mass-Action	4
Phase Separation in Systems of Interacting Active Brownian Particles	4
Mathematical Modeling and Solution Landscape Reveal Cancer Progression Dynamics in Tumor Ecological Microenvironment	4
Transport Models for Wave Propagation in Scattering Media with Nonlinear Absorption	4
Long-Time Dynamics of a Competition Model with Nonlocal Diffusion and Free Boundaries: Chances of Successful Invasion	4
Realistic Pattern Formations on Surfaces by Adding Arbitrary Roughness	4
Reconstruction of Multiscale Elastic Sources from Multifrequency Sparse Far Field Patterns	4
Appropriate State-Dependent Friction Coefficient Accelerates Kinetic Langevin Dynamics	4
Dynamics of an LPAA Model for Tribolium Growth: Insights into Population Chaos	3
Power-Engine-Load Form for Dynamic Absolute Concentration Robustness	3
A Matrix Basis Formulation for the Dyadic Green’s Functions of Maxwell’s Equations in Layered Media	3

PB-Steric Equations: A General Model of Poisson–Boltzmann Equations	3
The BCC Lattice in a Long-Range Interaction System	3
On the Validity of the Tight-Binding Method for Describing Systems of Subwavelength Resonators	3
Spurious Quasi-Resonances in Boundary Integral Equations for the Helmholtz Transmission Problem	3
On the Orbital Stability of Solitary Waves for the Fourth Order Nonlinear Schrödinger Equation	3
Self-Similar Accumulation of Passive Particles Against Solute Gradients in One-Dimensional Channels or Porous Layers	3
Exploring Low-Rank Structure for an Inverse Scattering Problem with Far-Field Data	3
Existence, Uniqueness, and Numerical Modeling of Wine Fermentation Based on Integro-Differential Equations	3
Nontrivial Traveling Waves of Phage-Bacteria Models in Different Media Types	3
Identifying Active Anomalies in a Multilayered Medium by Passive Measurement in EIT	3
Metropolized Forest Recombination for Monte Carlo Sampling of Graph Partitions	3
Pattern Formation of Bulk-Surface Reaction-Diffusion Systems in a Ball	3
Derivation and Stability Analysis of a Macroscopic Multilane Model for Traffic Flow	3
Twisted TMDs in the Small-Angle Limit: Exponentially Flat and Trivial Bands	3
Mathematical Analysis of a Subsurface Flow Model	3
Flow Measurement: An Inverse Problem Formulation	3
Infinite Energy Cavitating Solutions: A Variational Approach	3
Equivalent Formulations of the Oxygen Depletion Problem, Other Implicit Moving Boundary Value Problems, and Implications for Numerical Approximation	3
A Stable Imaging Functional for Anisotropic Periodic Media in Electromagnetic Inverse Scattering	3
Stability and Eigenvalue Asymptotics of Multi-Dimensional Fully Magnetic Effected Piezoelectric System with Friction-Type Infinite Memory	3
A New Perfectly Matched Layer Method for the Helmholtz Equation in Nonconvex Domains	3
Erratum: Classical and Quantum Random-Walk Centrality Measures in Multilayer Networks	3
Target Signatures for Anisotropic Screens in Electromagnetic Scattering	3
Modeling, Inference, and Prediction in Mobility-Based Compartmental Models for Epidemiology	3
Asymptotic Modeling of a Skin Effect in Magnetic Conductors	3
On the Dynamics of a Diffusive Foot-and-Mouth Disease Model with Nonlocal Infections	3
General Reconstruction of Elastic Strain Fields from their Longitudinal Ray Transform	3
A Homogenized Model for Dispersive Transport and Sorption in a Heterogeneous Porous Medium	3
Standing Waves of Reaction-Diffusion Equations on an Unbounded Graph with Two Vertices	3
Analyzing and Mimicking the Optimized Flight Physics of Soaring Birds: A Differential Geometric Control and Extremum Seeking System Approach with Real Time Implementation	3
Inverse Source Problem for Acoustically-Modulated Electromagnetic Waves	3
An Asymptotic Model for Gas-Solid Flow in a Countercurrent Moving Bed Reactor	3
Periodic Dynamics of a Reaction-Diffusion-Advection Model with Michaelis–Menten Type Harvesting in Heterogeneous Environments	3
The Combinatorial Code and the Graph Rules of Dale Networks	3
Continuation of Capillary Surfaces with Topological Change via the Van der Waals–Cahn–Hilliard Theory	3
A Maxwell–Ampère Nernst–Planck Framework for Modeling Charge Dynamics	3
Soil Searching by an Artificial Root	3
An Asymptotic Analysis of Space Charge Layers in a Mathematical Model of a Solid Electrolyte	3
Cover Times of Many Diffusive or Subdiffusive Searchers	3
Optimal Intervention Strategies for Minimizing Total Incidence During an Epidemic	3
KP-II Approximation for a Scalar Fermi–Pasta–Ulam System on a 2D Square Lattice	3
Exponential Asymptotics and Higher-Order Stokes Phenomenon in Singularly Perturbed ODEs	3
A Piecewise Deterministic Markov Process Approach Modeling a Dry Friction Problem with Noise	2
A Three-Dimensional Model of Skeletal Muscle Tissues	2
A Bimaterial Plane with a Nano-Sized Flexible Line Inclusion on the Interface	2
Probabilistic Modeling of Car Traffic Accidents	2
A PML Method for Signal-Propagation Problems in Axon	2
Time- Versus Frequency-Domain Inverse Elastic Scattering: Theory and Experiment	2
Reconstructing the Kinetic Chemotaxis Kernel Using Macroscopic Data: Well-Posedness and Ill-Posedness	2
A Domain Decomposition Method for Solution of a PDE-Constrained Generalized Nash Equilibrium Model of Biofilm Community Metabolism	2
Generalized Lotka–Volterra Systems and Complex Balanced Polyexponential Systems	2
A Hierarchy of Kinetic Discrete-Velocity Models for Traffic Flow Derived from a Nonlocal Prigogine–Herman Model	2
Time and Energy Costs for Synchronization of Kuramoto-Oscillator Networks With or Without Noise Perturbation	2
An Adaptive Compensation Strategy for Optimizing Release of Sterile Mosquitoes to Achieve Better Wild Mosquito Population Suppression: Insights from a Delay Differential Model and Analysis	2
A Gaussian Process Model for Insulin Secretion Reconstruction with Uncertainty Quantification: Applications in Cystic Fibrosis	2
Steady Wind-Generated Gravity-Capillary Waves on Viscous Liquid Film Flows	2
Topological Interface Modes in Systems with Damping	2
The Velocity Field and Birkhoff–Rott Integral for Nondecaying, Nonperiodic Vortex Sheets	2
A Modified Landau–de Gennes Theory for Smectic Liquid Crystals: Phase Transitions and Structural Transitions	2
Dweller-Wanderer Interaction for Chemotactic Phenomena	2
A Numerical Scheme and Validation of the Asymptotic Energy Release Rate Formula for a 2D Gel Thin-Film Debonding Problem	2
Population Dynamics on Periodically Evolving Domain with Periodic Growth Mechanisms	2
Radial Amplitude Equations for Fully Localized Planar Patterns	2
Linear Quadratic Regulation Control for Falling Liquid Films	2
Generating Customized Field Concentration via Virtual Surface Transmission Resonance	2
Asymmetric Deformations of a Perturbed Spherical Bubble in an Incompressible Fluid	2
Near-Collision Dynamics in a Noisy Car-Following Model	2
Joint Impact of Diffusion and Advection on Predator-Prey Dynamics with Delay and Fear Effect	2
Diffraction and Interaction of Interfacial Solitons in a Two-Layer Fluid of Great Depth	2
Density Fluctuations in Stochastic Kinematic Flows	2
A Homogenized Model of Fluid-String Interaction	2
Diffraction of Acoustic Waves by a Wedge of Point Scatterers	2
Linear Regularized 13-Moment Equations with Onsager Boundary Conditions for General Gas Molecules	2
Complex Structure in the Endemic Equilibrium Set of an SIS Epidemic Patch Model with the Mass-Action Infection Mechanism	2
Paraxial Wave Propagation in Random Media with Long-Range Correlations	2
First Hitting Time of a One-Dimensional Lévy Flight to Small Targets	2
Coarsening of Thin Films with Weak Condensation	2
Accumulation of Particles Towards the Envelope of a Fluid-Infused Patch Under Evaporation	2
Information-Open Electromagnetic Cloaks: Mathematical Analysis and Numerical Simulations	2
Effects of Anisotropy in Tridimensional Diffusion: Flow Patterns and Transport Efficiency	2
Finite Population Size Effects on Optimal Communication for Social Foragers	2
On Long Waves and Solitons in Particle Lattices with Forces of Infinite Range	2
An Axisymmetric Problem for a Patch Loaded Material Surface Attached to the Boundary of an Elastic Semi-space	2
Maximizing Metapopulation Growth Rate and Biomass in Stream Networks	2
Combined Field-Only Boundary Integral Equations for PEC Electromagnetic Scattering Problem in Spherical Geometries	2
Mathematical Analysis of a Model-Constrained Inverse Problem For the Reconstruction of Early States of Prostate Cancer Growth	2
A Stochastic Version of the Hopfield–Ninio Kinetic Proofreading Model	2
Why Increase of Heterogeneity Signals Pre-Deterioration During Tumor Progression: A Unified Mathematical Model	2
Targeting Influence in a Harmonic Opinion Model	2
A Density Description of a Bounded-Confidence Model of Opinion Dynamics on Hypergraphs	2
Asymptotic Properties of a General Model of Immune Status	2
Hypernetworks: Cluster Synchronization Is a Higher-Order Effect	2
A Macroscopically Consistent Reactive Langevin Dynamics Model	2
The Dynamics of a Collapsing Polyelectrolyte Gel	2
Homogenization for a Variational Problem with a Slip Interface Condition	2