Plant Physiology

Article	Citations
Root plasticity under abiotic stress	195
Transcription-associated metabolomic adjustments in maize occur during combined drought and cold stress	127
Plant SWEETs: from sugar transport to plant–pathogen interaction and more unexpected physiological roles	119
Building an extensible cell wall	118
Hormonal impact on photosynthesis and photoprotection in plants	112
Oxygen and reactive oxygen species-dependent regulation of plant growth and development	92
Inactivating transcription factorOsWRKY5enhances drought tolerance through abscisic acid signaling pathways	90
Brassica carinata genome characterization clarifies U’s triangle model of evolution and polyploidy in Brassica	87
Histone acetyltransferase TaHAG1 acts as a crucial regulator to strengthen salt tolerance of hexaploid wheat	85
The metabolic origins of non-photorespiratory CO2 release during photosynthesis: a metabolic flux analysis	81
The protein kinase CPK28 phosphorylates ascorbate peroxidase and enhances thermotolerance in tomato	77
Family-wide evaluation of RAPID ALKALINIZATION FACTOR peptides	77
Perception of solar UV radiation by plants: photoreceptors and mechanisms	73
Estimating leaf area index using unmanned aerial vehicle data: shallow vs. deep machine learning algorithms	73
Chloroplast-derived photo-oxidative stress causes changes in H2O2 and EGSH in other subcellular compartments	70
Stomatal, mesophyll conductance, and biochemical limitations to photosynthesis during induction	68
GRAS-domain transcription factor PAT1 regulates jasmonic acid biosynthesis in grape cold stress response	68
The impact of slow stomatal kinetics on photosynthesis and water use efficiency under fluctuating light	67
How plants protect themselves from ultraviolet-B radiation stress	66
Sucrose promotes stem branching through cytokinin	66
Mitochondrial redox systems as central hubs in plant metabolism and signaling	65
2021 update on ATP-binding cassette (ABC) transporters: how they meet the needs of plants	64
Vacuolar fructose transporter SWEET17 is critical for root development and drought tolerance	62
Perspectives on improving light distribution and light use efficiency in crop canopies	62
Redox regulation of chloroplast metabolism	61

Transporter SlSWEET15 unloads sucrose from phloem and seed coat for fruit and seed development in tomato	58
Wound-inducible WUSCHEL-RELATED HOMEOBOX 13 is required for callus growth and organ reconnection	57
Manipulating exudate composition from root apices shapes the microbiome throughout the root system	57
TIR signal promotes interactions between lipase-like proteins and ADR1-L1 receptor and ADR1-L1 oligomerization	57
OsYUC11-mediated auxin biosynthesis is essential for endosperm development of rice	56
Melatonin functions in priming of stomatal immunity inPanax notoginseng and Arabidopsis thaliana	55
Single-cell transcriptomics sheds light on the identity and metabolism of developing leaf cells	55
The fast and the furious: rapid long-range signaling in plants	54
Tobacco transcription factor bHLH123 improves salt tolerance by activating NADPH oxidase NtRbohE expression	54
Machine learning-enabled phenotyping for GWAS and TWAS of WUE traits in 869 field-grown sorghum accessions	53
Tomato roots secrete tomatine to modulate the bacterial assemblage of the rhizosphere	52
Knock out of transcription factor WRKY53 thickens sclerenchyma cell walls, confers bacterial blight resistance	51
Transport, functions, and interaction of calcium and manganese in plant organellar compartments	51
Adaptation of the parasitic plant lifecycle: germination is controlled by essential host signaling molecules	49
The molecular and genetic regulation of shoot branching	48
The mobile SAR signal N-hydroxypipecolic acid induces NPR1-dependent transcriptional reprogramming and immune priming	48
Herb and conifer roots show similar high sensitivity to water deficit	47
Nitric oxide coordinates growth, development, and stress response via histone modification and gene expression	47
SALT AND ABA RESPONSE ERF1 improves seed germination and salt tolerance by repressing ABA signaling in rice	47
The emerging role of GABA as a transport regulator and physiological signal	46
Soil textures rather than root hairs dominate water uptake and soil–plant hydraulics under drought	46
Shouting out loud: signaling modules in the regulation of stomatal development	46
MKK4-MPK3-WRKY17-mediated salicylic acid degradation increases susceptibility to Glomerella leaf spot in apple	46
New horizons for building pyrenoid-based CO2-concentrating mechanisms in plants to improve yields	46
MdWRKY126 modulates malate accumulation in apple fruit by regulating cytosolic malate dehydrogenase (MdMDH5)	46
Osa-miR1320targets the ERF transcription factor OsERF096 to regulate cold tolerance via JA-mediated signaling	45
The mechanism for brassinosteroids suppressing climacteric fruit ripening	45
Expanding the plant genome editing toolbox with recently developed CRISPR–Cas systems	45
The role of GDP-l-galactose phosphorylase in the control of ascorbate biosynthesis	44
Nitrate-induced CLE35 signaling peptides inhibit nodulation through the SUNN receptor and miR2111 repression	44
Salt stress alters membrane lipid content and lipid biosynthesis pathways in the plasma membrane and tonoplast	43
Illuminating the hidden world of calcium ions in plants with a universe of indicators	43
Kinase SnRK1.1 regulates nitrate channel SLAH3 engaged in nitrate-dependent alleviation of ammonium toxicity	43
OsmiR396/growth regulating factor modulate rice grain size through direct regulation of embryo-specific miR408	43
Impact of the SnRK1 protein kinase on sucrose homeostasis and the transcriptome during the diel cycle	43
DNA-free CRISPR-Cas9 gene editing of wild tetraploid tomato Solanum peruvianum using protoplast regeneration	43
The mechanism of host-induced germination in root parasitic plants	43
To the proteome and beyond: advances in single-cell omics profiling for plant systems	43
Ethylene response factors 15 and 16 trigger jasmonate biosynthesis in tomato during herbivore resistance	43
lncRNA7 and lncRNA2 modulate cell wall defense genes to regulate cotton resistance to Verticillium wilt	42
Genome editing around the globe: An update on policies and perceptions	42
SAUR proteins and PP2C.D phosphatases regulate H+-ATPases and K+ channels to control stomatal movements	42
TWAS results are complementary to and less affected by linkage disequilibrium than GWAS	42
Gibberellin and auxin signaling genes RGA1 and ARF8 repress accessory fruit initiation in diploid strawberry	42
Systematic analysis of specific and nonspecific auxin effects on endocytosis and trafficking	41
Current progress in Striga management	41
Brassinosteroids regulate rice seed germination through the BZR1-RAmy3D transcriptional module	41
Hexose transporter CsSWEET7a in cucumber mediates phloem unloading in companion cells for fruit development	41
miR169q and NUCLEAR FACTOR YA8 enhance salt tolerance by activating PEROXIDASE1 expression in response to ROS	41
A systemic whole-plant change in redox levels accompanies the rapid systemic response to wounding	41

Intracellular phosphate sensing and regulation of phosphate transport systems in plants	41
A regulatory network driving shoot lignification in rapidly growing bamboo	40
The rice phosphate transporter OsPHT1;7 plays a dual role in phosphorus redistribution and anther development	40
Narrow Leaf21, encoding ribosomal protein RPS3A, controls leaf development in rice	40
Genetic variation in the promoter of an R2R3−MYB transcription factor determines fruit malate content in apple (Malus domestica Borkh.)	39
FvWRKY48 binds to the pectate lyase FvPLA promoter to control fruit softening in Fragaria vesca	39
A long noncoding RNA functions in high-light-induced anthocyanin accumulation in apple by activating ethylene synthesis	39
Live monitoring of plant redox and energy physiology with genetically encoded biosensors	39
OsNAC016 regulates plant architecture and drought tolerance by interacting with the kinases GSK2 and SAPK8	39
Salicylic acid carboxyl glucosyltransferase UGT87E7 regulates disease resistance inCamellia sinensis	39
Auxin biosynthesis maintains embryo identity and growth during BABY BOOM-induced somatic embryogenesis	39
Optical topometry and machine learning to rapidly phenotype stomatal patterning traits for maize QTL mapping	38
Zinc-finger protein MdBBX7/MdCOL9, a target of MdMIEL1 E3 ligase, confers drought tolerance in apple	38
The impact of drought-induced root and root hair shrinkage on root–soil contact	38
Parental variation in CHG methylation is associated with allelic-specific expression in elite hybrid rice	38
Sheet-like clay nanoparticles deliver RNA into developing pollen to efficiently silence a target gene	38
Ethylene response factor MdERF4 and histone deacetylase MdHDA19 suppress apple fruit ripening through histone deacetylation of ripening-related genes	38
Melatonin-priming enhances maize seedling drought tolerance by regulating the antioxidant defense system	38
Two stripe rust effectors impair wheat resistance by suppressing import of host Fe–S protein into chloroplasts	38
The unique sweet potato NAC transcription factor IbNAC3 modulates combined salt and drought stresses	38
Pepper NAC-type transcription factor NAC2c balances the trade-off between growth and defense responses	38
A tobacco ringspot virus-based vector system for gene and microRNA function studies in cucurbits	37
The signatures of organellar calcium	37
Maize Golden2-like transcription factors boost rice chloroplast development, photosynthesis, and grain yield	37
Selective redox signaling shapes plant–pathogen interactions	37
Biosynthesis and antifungal activity of fungus-induced O-methylated flavonoids in maize	37
Proton and calcium pumping P-type ATPases and their regulation of plant responses to the environment	37
Transcriptional reprogramming of xylem cell wall biosynthesis in tension wood	37
DIRT/3D: 3D root phenotyping for field-grown maize (Zea mays)	37
Regulation of carotenoid and chlorophyll pools in hesperidia, anatomically unique fruits found only in Citrus	37
Peroxisomes as redox-signaling nodes in intracellular communication and stress responses	36
The transcription factor MdMYB2 influences cold tolerance and anthocyanin accumulation by activating SUMO E3 ligase MdSIZ1 in apple	36
MADS-box transcription factors MADS11 and DAL1 interact to mediate the vegetative-to-reproductive transition in pine	36
Arabidopsis CBP60b is a central transcriptional activator of immunity	36
Lateral root formation and nutrients: nitrogen in the spotlight	36
Redox and low-oxygen stress: signal integration and interplay	36
F-box protein EBF1 and transcription factor ABI5-like regulate banana fruit chilling-induced ripening disorder	35
Imaging plant cells and organs with light-sheet and super-resolution microscopy	35
A roadmap of plant membrane transporters in arbuscular mycorrhizal and legume–rhizobium symbioses	35
Single-cell genomics in plants: current state, future directions, and hurdles to overcome	35
Diversification of plant agronomic traits by genome editing of brassinosteroid signaling family genes in rice	35
X-ray microscopy enables multiscale high-resolution 3D imaging of plant cells, tissues, and organs	35
Unique features of mRNA m6A methylomes during expansion of tomato (Solanum lycopersicum) fruits	35
Phosphorylation of transcription factor bZIP21 by MAP kinase MPK6-3 enhances banana fruit ripening	35
Molecular basis for high ligand sensitivity and selectivity of strigolactone receptors in Striga	34
Shoot and root single cell sequencing reveals tissue- and daytime-specific transcriptome profiles	34
The positive feedback regulatory loop of miR160-Auxin Response Factor 17-HYPONASTIC LEAVES 1 mediates drought tolerance in apple trees	34
Transcription factor StABI5-like 1 binding to the FLOWERING LOCUS T homologs promotes early maturity in potato	34
HSP70-3 Interacts with Phospholipase Dδ and Participates in Heat Stress Defense	34
γ-Aminobutyric acid plays a key role in plant acclimation to a combination of high light and heat stress	34
Epigenetic features drastically impact CRISPR–Cas9 efficacy in plants	34
The URL1–ROC5–TPL2 transcriptional repressor complex represses the ACL1 gene to modulate leaf rolling in rice	33
Xylem network connectivity and embolism spread in grapevine(Vitis viniferaL.)	33
Identification and characterization of sorgomol synthase in sorghum strigolactone biosynthesis	33
Reinforcement of CHH methylation through RNA-directed DNA methylation ensures sexual reproduction in rice	33
Kiwifruit bZIP transcription factorAcePosF21elicits ascorbic acid biosynthesis during cold stress	33
Life history, diversity, and distribution in parasitic flowering plants	33
Ethylene augments root hypoxia tolerance via growth cessation and reactive oxygen species amelioration	33
Ubiquitylome analysis reveals a central role for the ubiquitin-proteasome system in plant innate immunity	33
The bright side of parasitic plants: what are they good for?	33
Aquaporin OsPIP2;2 links the H2O2 signal and a membrane-anchored transcription factor to promote plant defense	32
ConnecTF: A platform to integrate transcription factor–gene interactions and validate regulatory networks	32
Function of membrane domains in rho-of-plant signaling	32
Jasmonic acid and salicylic acid modulate systemic reactive oxygen species signaling during stress responses	32
In vivo single-particle tracking of the aquaporin AtPIP2;1 in stomata reveals cell type-specific dynamics	32
Insights into the mechanisms of transport and regulation of the arabidopsis high-affinity K+ transporter HAK51	32
AUXIN RESPONSE FACTOR 18–HISTONE DEACETYLASE 6 module regulates floral organ identity in rose (Rosa hybrida)	32
Inducible epigenome editing probes for the role of histone H3K4 methylation in Arabidopsis heat stress memory	31
Vascular and nonvascular transmission of systemic reactive oxygen signals during wounding and heat stress	31
Distinct signaling routes mediate intercellular and intracellular rhizobial infection inLotus japonicus	31
Classical phenotyping and deep learning concur on genetic control of stomatal density and area in sorghum	31
HECATE2 acts with GLABROUS3 and Tu to boost cytokinin biosynthesis and regulate cucumber fruit wart formation	31
Alternative oxidase (AOX) 1a and 1d limit proline-induced oxidative stress and aid salinity recovery in Arabidopsis	31
OsGRETCHENHAGEN3-2modulates rice seed storability via accumulation of abscisic acid and protective substances	31
RLB (RICE LATERAL BRANCH) recruits PRC2-mediated H3K27 tri-methylation on OsCKX4 to regulate lateral branching	31
Designs, applications, and limitations of genetically encoded fluorescent sensors to explore plant biology	31
SeedQuant: a deep learning-based tool for assessing stimulant and inhibitor activity on root parasitic seeds	31
IRONMAN tunes responses to iron deficiency in concert with environmental pH	30
A 2-oxoglutarate-dependent dioxygenase converts dihydrofuran to furan in Salvia diterpenoids	30
Large-scale identification of ubiquitination sites on membrane-associated proteins in Arabidopsis thaliana seedlings	30

The NAC transcription factor ANAC017 regulates aluminum tolerance by regulating the cell wall-modifying genes	30
Pathways to de novo domestication of crop wild relatives	30
Stomatal morphology and physiology explain varied sensitivity to abscisic acid across vascular plant lineages	30
YSL3-mediated copper distribution is required for fertility, seed size and protein accumulation in Brachypodium	30
Insights into cell wall changes during fruit softening from transgenic and naturally occurring mutants	30
An in situ sequencing approach maps PLASTOCHRON1 at the boundary between indeterminate and determinate cells	30
Motif-based endomembrane trafficking	30
The interplay of auxin and brassinosteroid signaling tunes root growth under low and different nitrogen forms	30
Piriformospora indica recruits host-derived putrescine for growth promotion in plants	30
Temporal changes in metabolism late in seed development affect biomass composition	30
Sucrose nonfermenting-1-related protein kinase 1 regulates sheath-to-panicle transport of nonstructural carbohydrates during rice grain filling	30
Phenotyping stomatal closure by thermal imaging for GWAS and TWAS of water use efficiency-related genes	30
Cytotoxic function of xylanase VdXyn4 in the plant vascular wilt pathogen Verticillium dahliae	30
Metabolic control of histone demethylase activity involved in plant response to high temperature	30
A temperature-sensitive FERONIA mutant allele that alters root hair growth	29
Phylloquinone is the principal Mehler reaction site within photosystem I in high light	29
miR2105 and the kinase OsSAPK10 co-regulate OsbZIP86 to mediate drought-induced ABA biosynthesis in rice	29
Multi-omics approach reveals the contribution of KLU to leaf longevity and drought tolerance	29
The bHLH/HLH transcription factors GhFP2 and GhACE1 antagonistically regulate fiber elongation in cotton	29
Rice CIRCADIAN CLOCK ASSOCIATED 1 transcriptionally regulates ABA signaling to confer multiple abiotic stress tolerance	29
Genome- and transcriptome-wide off-target analyses of an improved cytosine base editor	29
Sensing stress responses in potato with whole-plant redox imaging	29
Auxin-independent effects of apical dominance induce changes in phytohormones correlated with bud outgrowth	29
Deficiency in flavonoid biosynthesis genesCHS,CHI, andCHILalters rice flavonoid and lignin profiles	29
Flavonoids naringenin chalcone, naringenin, dihydrotricin, and tricin are lignin monomers in papyrus	29
Neofunctionalization of a polyploidization-activated cotton long intergenic non-coding RNA DAN1 during drought stress regulation	29
Fatty acid photodecarboxylase is an ancient photoenzyme that forms hydrocarbons in the thylakoids of algae	29
B-box protein BBX32 integrates light and brassinosteroid signals to inhibit cotyledon opening	29
Rapid stomatal closure contributes to higher water use efficiency in major C4 compared to C3 Poaceae crops	29
Improvement of base editors and prime editors advances precision genome engineering in plants	29
Linker histone variant HIS1-3 and WRKY1 oppositely regulate salt stress tolerance in Arabidopsis	28
The regulatory module MdBT2–MdMYB88/MdMYB124–MdNRTs regulates nitrogen usage in apple	28
Cellular export of sugars and amino acids: role in feeding other cells and organisms	28
bHLH11 inhibits bHLH IVc proteins by recruiting the TOPLESS/TOPLESS-RELATED corepressors	28
Attracted to membranes: lipid-binding domains in plants	28
Membrane voltage as a dynamic platform for spatiotemporal signaling, physiological, and developmental regulation	28
Disruption of mitochondrial open reading frame 352 partially restores pollen development in cytoplasmic male sterile rice	28
Drought induces epitranscriptome and proteome changes in stem-differentiating xylem of Populus trichocarpa	28
CONSTANS-LIKE 1a positively regulates salt and drought tolerance in soybean	28
The adaptive nature of the plant circadian clock in natural environments	28
Asymmetric redundancy of soybean Nodule Inception (NIN) genes in root nodule symbiosis	28
The transcription factor OsMYBc and an E3 ligase regulate expression of a K+ transporter during salt stress	27
DIOXYGENASE FOR AUXIN OXIDATION 1 catalyzes the oxidation of IAA amino acid conjugates	27
WRKY transcription factors and ethylene signaling modify root growth during the shade-avoidance response	27
Heat stress interferes with formation of double-strand breaks and homolog synapsis	27
Simultaneous imaging of ER and cytosolic Ca2+ dynamics reveals long-distance ER Ca2+ waves in plants	27
Tuning promoter boundaries improves regulatory motif discovery in nonmodel plants: the peach example	27
Transcription factor LcNAC002 coregulates chlorophyll degradation and anthocyanin biosynthesis in litchi	27
Resources for image-based high-throughput phenotyping in crops and data sharing challenges	27
Advances in gene editing without residual transgenes in plants	27
The phosphorylated pathway of serine biosynthesis links plant growth with nitrogen metabolism	26
Can we harness digital technologies and physiology to hasten genetic gain in US maize breeding?	26
CRISPR–Cas-mediated transcriptional control and epi-mutagenesis	26
An update on precision genome editing by homology-directed repair in plants	26
Inflorescence abscission protein SlIDL6 promotes low light intensity-induced tomato flower abscission	26
High-efficiency multiplex biallelic heritable editing in Arabidopsis using an RNA virus	26
Importance of the description of light interception in crop growth models	26
pHBMT1, a BAHD-family monolignol acyltransferase, mediates lignin acylation in poplar	26
Fluorescent biosensors illuminating plant hormone research	26
MdbHLH4 negatively regulates apple cold tolerance by inhibiting MdCBF1/3 expression and promoting MdCAX3L-2 expression	26
m6A mRNA modification promotes chilling tolerance and modulates gene translation efficiency in Arabidopsis	26
A multiple ion-uptake phenotyping platform reveals shared mechanisms affecting nutrient uptake by roots	26
Maize miR167-ARF3/30-polyamine oxidase 1 module-regulated H2O2 production confers resistance to maize chlorotic mottle virus	26
Transcription factor BZR2 activates chitinase Cht20.2 transcription to confer resistance to wheat stripe rust	26
CYTOKININ-RESPONSIVE GROWTH REGULATOR regulates cell expansion and cytokinin-mediated cell cycle progression	26
Arabidopsis Ca2+-ATPases 1, 2, and 7 in the endoplasmic reticulum contribute to growth and pollen fitness	26
GRAS transcription factor LOSS OF AXILLARY MERISTEMS is essential for stamen and runner formation in wild strawberry	26
CALCIUM-DEPENDENT PROTEIN KINASE38 regulates flowering time and common cutworm resistance in soybean	26
Transcription factors ABF4 and ABR1 synergistically regulate amylase-mediated starch catabolism in drought tolerance	25
Root acid phosphatases and rhizobacteria synergistically enhance white lupin and rice phosphorus acquisition	25
Kingdom-wide analysis of the evolution of the plant type III polyketide synthase superfamily	25
ECERIFERUM1-6A is required for the synthesis of cuticular wax alkanes and promotes drought tolerance in wheat	25
Revealing the architecture of the photosynthetic apparatus in the diatom Thalassiosira pseudonana	25
CRISPR/Cas9 mutants of tomato MICRORNA164 genes uncover their functional specialization in development	25
Electron microscopy for imaging organelles in plants and algae	25
Phytophthora sojae apoplastic effector AEP1 mediates sugar uptake by mutarotation of extracellular aldose and is recognized as a MAMP	25
SlERF52 regulates SlTIP1;1 expression to accelerate tomato pedicel abscission	25
Downsizing in plants—UV light induces pronounced morphological changes in the absence of stress	25
The HD-Zip transcription factor SlHB15A regulates abscission by modulating jasmonoyl-isoleucine biosynthesis	25
The latest HyPe(r) in plant H2O2 biosensing	25
Abscisic acid increases hydrogen peroxide in mitochondria to facilitate stomatal closure	25
BETA-AMYLASE9 is a plastidial nonenzymatic regulator of leaf starch degradation	25
The rice germin-like protein OsGLP1 participates in acclimation to UV-B radiation	25
Transcriptional networks regulating suberin and lignin in endodermis link development and ABA response	25
Tomato brown rugose fruit virus resistance generated by quadruple knockout of homologs of TOBAMOVIRUS MULTIPLICATION1 in tomato	25
Epigenomic features of DNA G-quadruplexes and their roles in regulating rice gene transcription	24
Toward synthetic plant development	24
A seed coat-specific β-ketoacyl-CoA synthase, KCS12, is critical for preserving seed physical dormancy	24
Nutrient cycling is an important mechanism for homeostasis in plant cells	24
Large-scale field phenotyping using backpack LiDAR and CropQuant-3D to measure structural variation in wheat	24
Rubisco regulation in response to altered carbon status in the cyanobacteriumSynechococcus elongatusPCC 7942	24
F-box protein MdAMR1L1 regulates ascorbate biosynthesis in apple by modulating GDP-mannose pyrophosphorylase	24
The cell biology of charophytes: Exploring the past and models for the future	24
The histone variant H3.3 promotes the active chromatin state to repress flowering in Arabidopsis	24
The transcription factor PbrMYB24 regulates lignin and cellulose biosynthesis in stone cells of pear fruits	24