OOIR: Observatory of International Research

Papers

(The median citation count of Journal of Virology is 4. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-04-01 to 2024-04-01.)

Article	Citations
Human Leukocyte Antigen Susceptibility Map for Severe Acute Respiratory Syndrome Coronavirus 2	369
The Nucleocapsid Protein of SARS–CoV-2: a Target for Vaccine Development	306
Genomic Characterization of a Novel SARS-CoV-2 Lineage from Rio de Janeiro, Brazil	243
Type I Interferon Susceptibility Distinguishes SARS-CoV-2 from SARS-CoV	239
Type I and Type III Interferons Restrict SARS-CoV-2 Infection of Human Airway Epithelial Cultures	228
Changes in SARS-CoV-2 Spike versus Nucleoprotein Antibody Responses Impact the Estimates of Infections in Population-Based Seroprevalence Studies	178
The Enzymatic Activity of the nsp14 Exoribonuclease Is Critical for Replication of MERS-CoV and SARS-CoV-2	176
Susceptibility of White-Tailed Deer (Odocoileus virginianus) to SARS-CoV-2	167
SARS-CoV-2 Triggers an MDA-5-Dependent Interferon Response Which Is Unable To Control Replication in Lung Epithelial Cells	160
The Inhaled Steroid Ciclesonide Blocks SARS-CoV-2 RNA Replication by Targeting the Viral Replication-Transcription Complex in Cultured Cells	147
Design of Potent Membrane Fusion Inhibitors against SARS-CoV-2, an Emerging Coronavirus with High Fusogenic Activity	143
Omicron: What Makes the Latest SARS-CoV-2 Variant of Concern So Concerning?	143
Broad Anti-coronavirus Activity of Food and Drug Administration-Approved Drugs against SARS-CoV-2 In Vitro and SARS-CoV In Vivo	142
Effective Inhibition of SARS-CoV-2 Entry by Heparin and Enoxaparin Derivatives	141
Comparison of Severe Acute Respiratory Syndrome Coronavirus 2 Spike Protein Binding to ACE2 Receptors from Human, Pets, Farm Animals, and Putative Intermediate Hosts	134
Cressdnaviricota : a Virus Phylum Unifying Seven Families of Rep-Encoding Viruses with Single-Stranded, Circular DNA Genomes	117
The Polybasic Cleavage Site in SARS-CoV-2 Spike Modulates Viral Sensitivity to Type I Interferon and IFITM2	115
Broad and Differential Animal Angiotensin-Converting Enzyme 2 Receptor Usage by SARS-CoV-2	114
Identification of Common Deletions in the Spike Protein of Severe Acute Respiratory Syndrome Coronavirus 2	113
Optimized Pseudotyping Conditions for the SARS-COV-2 Spike Glycoprotein	108
An 81-Nucleotide Deletion in SARS-CoV-2 ORF7a Identified from Sentinel Surveillance in Arizona (January to March 2020)	107
Computational Inference of Selection Underlying the Evolution of the Novel Coronavirus, Severe Acute Respiratory Syndrome Coronavirus 2	107
The African Swine Fever Virus Transcriptome	107
Contribution of SARS-CoV-2 Accessory Proteins to Viral Pathogenicity in K18 Human ACE2 Transgenic Mice	90
SARS-CoV-2 and Three Related Coronaviruses Utilize Multiple ACE2 Orthologs and Are Potently Blocked by an Improved ACE2-Ig	89

Nonsteroidal Anti-inflammatory Drugs Dampen the Cytokine and Antibody Response to SARS-CoV-2 Infection	87
A Comparative Analysis of SARS-CoV-2 Antivirals Characterizes 3CL ^pro Inhibitor PF-00835231 as a Potential New Treatment for COVID-19	84
Ca ²⁺ Ions Promote Fusion of Middle East Respiratory Syndrome Coronavirus with Host Cells and Increase Infectivity	83
Comparison of Subgenomic and Total RNA in SARS-CoV-2-Challenged Rhesus Macaques	82
Development of a Fluorescence-Based, High-Throughput SARS-CoV-2 3CL ^pro Reporter Assay	79
The K18-Human ACE2 Transgenic Mouse Model Recapitulates Non-severe and Severe COVID-19 in Response to an Infectious Dose of the SARS-CoV-2 Virus	79
The SARS-CoV-2 Conserved Macrodomain Is a Mono-ADP-Ribosylhydrolase	79
COVID-19 Vaccines: “Warp Speed” Needs Mind Melds, Not Warped Minds	77
Deletion of the SARS-CoV-2 Spike Cytoplasmic Tail Increases Infectivity in Pseudovirus Neutralization Assays	77
COVID-19 Vaccine Candidates Based on Modified Vaccinia Virus Ankara Expressing the SARS-CoV-2 Spike Protein Induce Robust T- and B-Cell Immune Responses and Full Efficacy in Mice	75
V367F Mutation in SARS-CoV-2 Spike RBD Emerging during the Early Transmission Phase Enhances Viral Infectivity through Increased Human ACE2 Receptor Binding Affinity	70
SARS-CoV-2 Nonstructural Protein 1 Inhibits the Interferon Response by Causing Depletion of Key Host Signaling Factors	69
Serum Neutralizing Activity of mRNA-1273 against SARS-CoV-2 Variants	67
SARS-CoV-2 and SARS-CoV Spike-Mediated Cell-Cell Fusion Differ in Their Requirements for Receptor Expression and Proteolytic Activation	66
Distinctive Roles of Furin and TMPRSS2 in SARS-CoV-2 Infectivity	65
SARS-CoV-2 Causes Severe Epithelial Inflammation and Barrier Dysfunction	65
The NF-κB Transcriptional Footprint Is Essential for SARS-CoV-2 Replication	64
Deletion of the A137R Gene from the Pandemic Strain of African Swine Fever Virus Attenuates the Strain and Offers Protection against the Virulent Pandemic Virus	61
LY6E Restricts Entry of Human Coronaviruses, Including Currently Pandemic SARS-CoV-2	60
Remodeling of the Core Leads HIV-1 Preintegration Complex into the Nucleus of Human Lymphocytes	59
Structure of Nonstructural Protein 1 from SARS-CoV-2	58
A Cell Culture-Adapted Vaccine Virus against the Current African Swine Fever Virus Pandemic Strain	56
SARS-CoV-2 Disrupts Proximal Elements in the JAK-STAT Pathway	56
Middle East Respiratory Syndrome Coronavirus Nucleocapsid Protein Suppresses Type I and Type III Interferon Induction by Targeting RIG-I Signaling	55
Evolutionary Arms Race between Virus and Host Drives Genetic Diversity in Bat Severe Acute Respiratory Syndrome-Related Coronavirus Spike Genes	54
African Swine Fever Virus E120R Protein Inhibits Interferon Beta Production by Interacting with IRF3 To Block Its Activation	53
A Founder Effect Led Early SARS-CoV-2 Transmission in Spain	53
SARS-CoV-2 Causes Lung Infection without Severe Disease in Human ACE2 Knock-In Mice	53
African Swine Fever Virus Bearing an I226R Gene Deletion Elicits Robust Immunity in Pigs to African Swine Fever	53
Spike Glycoprotein and Host Cell Determinants of SARS-CoV-2 Entry and Cytopathic Effects	52
Respiratory Syncytial Virus Sequesters NF-κB Subunit p65 to Cytoplasmic Inclusion Bodies To Inhibit Innate Immune Signaling	52
Flavivirus Envelope Protein Glycosylation: Impacts on Viral Infection and Pathogenesis	50
Disruption of Adaptive Immunity Enhances Disease in SARS-CoV-2-Infected Syrian Hamsters	50
Direct Activation of Endothelial Cells by SARS-CoV-2 Nucleocapsid Protein Is Blocked by Simvastatin	49
Replication of Severe Acute Respiratory Syndrome Coronavirus 2 in Human Respiratory Epithelium	48
SARS-CoV-2 Spike Protein Induces Paracrine Senescence and Leukocyte Adhesion in Endothelial Cells	48
HTCC as a Polymeric Inhibitor of SARS-CoV-2 and MERS-CoV	47
T Cell Responses Induced by Attenuated Flavivirus Vaccination Are Specific and Show Limited Cross-Reactivity with Other Flavivirus Species	47
Isolation and Full-Length Genome Characterization of SARS-CoV-2 from COVID-19 Cases in Northern Italy	47
The A137R Protein of African Swine Fever Virus Inhibits Type I Interferon Production via the Autophagy-Mediated Lysosomal Degradation of TBK1	46
Human Nasal and Lung Tissues Infected Ex Vivo with SARS-CoV-2 Provide Insights into Differential Tissue-Specific and Virus-Specific Innate Immune Responses in the Upper	46
Interferon-Induced Protein 44 and Interferon-Induced Protein 44-Like Restrict Replication of Respiratory Syncytial Virus	45
Next-Generation Porcine Intestinal Organoids: an Apical-Out Organoid Model for Swine Enteric Virus Infection and Immune Response Investigations	45
Sequence Evaluation and Comparative Analysis of Novel Assays for Intact Proviral HIV-1 DNA	44
Butyrate Reprograms Expression of Specific Interferon-Stimulated Genes	43
Identification of SARS-CoV-2 Nucleocapsid and Spike T-Cell Epitopes for Assessing T-Cell Immunity	42
Potent Neutralization of SARS-CoV-2 by Hetero-Bivalent Alpaca Nanobodies Targeting the Spike Receptor-Binding Domain	42
RNase L Amplifies Interferon Signaling by Inducing Protein Kinase R-Mediated Antiviral Stress Granules	41
Combination of CD8β Depletion and Interleukin-15 Superagonist N-803 Induces Virus Reactivation in Simian-Human Immunodeficiency Virus-Infected, Long-Term ART-Treated Rhesus Macaques	40
African Swine Fever Virus and Host Response: Transcriptome Profiling of the Georgia 2007/1 Strain and Porcine Macrophages	40

SARS-CoV-2 Rapidly Adapts in Aged BALB/c Mice and Induces Typical Pneumonia	40
Metabolic Syndrome and Viral Pathogenesis: Lessons from Influenza and Coronaviruses	39
Targeting the Conserved Stem Loop 2 Motif in the SARS-CoV-2 Genome	39
An Optimized Reverse Genetics System Suitable for Efficient Recovery of Simian, Human, and Murine-Like Rotaviruses	39
Non-nucleoside Inhibitors of Zika Virus RNA-Dependent RNA Polymerase	38
Activation of STING Signaling Pathway Effectively Blocks Human Coronavirus Infection	38
Coinfection with SARS-CoV-2 and Influenza A Virus Increases Disease Severity and Impairs Neutralizing Antibody and CD4 ⁺ T Cell Responses	38
The Pyrimidine Analog FNC Potently Inhibits the Replication of Multiple Enteroviruses	38
A Dengue Virus Serotype 1 mRNA-LNP Vaccine Elicits Protective Immune Responses	37
Partitiviruses Infecting Drosophila melanogaster and Aedes aegypti Exhibit Efficient Biparental Vertical Transmission	37
Coevolution of Adeno-associated Virus Capsid Antigenicity and Tropism through a Structure-Guided Approach	37
Direct Evidence for Infection of Varroa destructor Mites with the Bee-Pathogenic Deformed Wing Virus Variant B, but Not Variant A, via Fluorescence In Sit	37
Inhibition of Autophagy Suppresses SARS-CoV-2 Replication and Ameliorates Pneumonia in hACE2 Transgenic Mice and Xenografted Human Lung Tissues	37
EGR1 Suppresses Porcine Epidemic Diarrhea Virus Replication by Regulating IRAV To Degrade Viral Nucleocapsid Protein	36
The SARS-CoV-2 N Protein Is a Good Component in a Vaccine	35
Human Cytomegalovirus Glycoprotein B Nucleoside-Modified mRNA Vaccine Elicits Antibody Responses with Greater Durability and Breadth than MF59-Adjuvanted gB Protein Immunization	35
Generation and Characterization of Recombinant SARS-CoV-2 Expressing Reporter Genes	35
Roles of Two Major Domains of the Porcine Deltacoronavirus S1 Subunit in Receptor Binding and Neutralization	35
Structural Basis for Human Receptor Recognition by SARS-CoV-2 Omicron Variant BA.1	35
Absence of Long-Term Protection in Domestic Pigs Immunized with Attenuated African Swine Fever Virus Isolate OURT88/3 or BeninΔMGF Correlates with Increased Levels of Regulatory T Cells and Interleuki	34
International Expansion of a Novel SARS-CoV-2 Mutant	34
Modified Sialic Acids on Mucus and Erythrocytes Inhibit Influenza A Virus Hemagglutinin and Neuraminidase Functions	34
Coronavirus Porcine Epidemic Diarrhea Virus Nucleocapsid Protein Interacts with p53 To Induce Cell Cycle Arrest in S-Phase and Promotes Viral Replication	34
Switching Sides: How Endogenous Retroviruses Protect Us from Viral Infections	34
Universal Influenza Virus Neuraminidase Vaccine Elicits Protective Immune Responses against Human Seasonal and Pre-pandemic Strains	33
The RNA Binding Proteins YTHDC1 and FMRP Regulate the Nuclear Export of N ⁶ -Methyladenosine-Modified Hepatitis B Virus Transcripts and Affect the	33
SARS-CoV-2 N Protein Antagonizes Stress Granule Assembly and IFN Production by Interacting with G3BPs to Facilitate Viral Replication	33
Synergistic Block of SARS-CoV-2 Infection by Combined Drug Inhibition of the Host Entry Factors PIKfyve Kinase and TMPRSS2 Protease	33
Are COVID-19 Vaccine Boosters Needed? The Science behind Boosters	32
SARS-CoV-2 Spike Protein Stabilized in the Closed State Induces Potent Neutralizing Responses	32
Covalent Modifications of the Bacteriophage Genome Confer a Degree of Resistance to Bacterial CRISPR Systems	32
Dengue Virus Targets Nrf2 for NS2B3-Mediated Degradation Leading to Enhanced Oxidative Stress and Viral Replication	32
Amyloid-β and p-Tau Anti-Threat Response to Herpes Simplex Virus 1 Infection in Primary Adult Murine Hippocampal Neurons	32
Coronavirus Endoribonuclease and Deubiquitinating Interferon Antagonists Differentially Modulate the Host Response during Replication in Macrophages	32
Long Noncoding RNA NRAV Promotes Respiratory Syncytial Virus Replication by Targeting the MicroRNA miR-509-3p/Rab5c Axis To Regulate Vesicle Transportation	32
The Omicron Variant BA.1.1 Presents a Lower Pathogenicity than B.1 D614G and Delta Variants in a Feline Model of SARS-CoV-2 Infection	32
Specific Interaction of NovelFriunavirusPhages Encoding Tailspike Depolymerases with Corresponding Acinetobacter baumannii Capsular Types	32
CD21 (Complement Receptor 2) Is the Receptor for Epstein-Barr Virus Entry into T Cells	32
Characterization of Hepatitis B Precore/Core-Related Antigens	32
Structural Basis of the Main Proteases of Coronavirus Bound to Drug Candidate PF-07321332	32
Neutrophil-Airway Epithelial Interactions Result in Increased Epithelial Damage and Viral Clearance during Respiratory Syncytial Virus Infection	31
A Nucleic Acid-Based Orthopoxvirus Vaccine Targeting the Vaccinia Virus L1, A27, B5, and A33 Proteins Protects Rabbits against Lethal Rabbitpox Virus Aerosol Challenge	31
Benefits and Perils of Necroptosis in Influenza Virus Infection	31
Transcriptome Mining Expands Knowledge of RNA Viruses across the Plant Kingdom	31
Genomic Analysis of Early SARS-CoV-2 Variants Introduced in Mexico	31
SARS-CoV-2 Evolution: On the Sudden Appearance of the Omicron Variant	31
Comparative Analysis of RNA Virome Composition in Rabbits and Associated Ectoparasites	30
An R195K Mutation in the PA-X Protein Increases the Virulence and Transmission of Influenza A Virus in Mammalian Hosts	30
Binding of Duck Tembusu Virus Nonstructural Protein 2A to Duck STING Disrupts Induction of Its Signal Transduction Cascade To Inhibit Beta Interferon Induction	29
SMAC Mimetic Plus Triple-Combination Bispecific HIVxCD3 Retargeting Molecules in SHIV.C.CH505-Infected, Antiretroviral Therapy-Suppressed Rhesus Macaques	29
Circular RNA circPIKfyve Acts as a Sponge of miR-21-3p To Enhance Antiviral Immunity through Regulation of MAVS in Teleost Fish	29
The Global and Local Distribution of RNA Structure throughout the SARS-CoV-2 Genome	29
Inhibition of Human Adenovirus Replication by the Importin α/β1 Nuclear Import Inhibitor Ivermectin	29
Rapid SARS-CoV-2 Adaptation to Available Cellular Proteases	29
A Persistent Giant Algal Virus, with a Unique Morphology, Encodes an Unprecedented Number of Genes Involved in Energy Metabolism	29
Highly Efficient SARS-CoV-2 Infection of Human Cardiomyocytes: Spike Protein-Mediated Cell Fusion and Its Inhibition	28
Crystal Structure of African Swine Fever Virus pS273R Protease and Implications for Inhibitor Design	28
Correlates of Neutralization against SARS-CoV-2 Variants of Concern by Early Pandemic Sera	28
African Swine Fever Virus Regulates Host Energy and Amino Acid Metabolism To Promote Viral Replication	28
Characterization and Genomic Analysis of ValSw3-3, a New Siphoviridae Bacteriophage Infecting Vibrio alginolyticus	27
Segment-Specific Kinetics of mRNA, cRNA, and vRNA Accumulation during Influenza Virus Infection	27
The Dynamic Interface of Viruses with STATs	27
Immune Escape Adaptive Mutations in the H7N9 Avian Influenza Hemagglutinin Protein Increase Virus Replication Fitness and Decrease Pandemic Potential	27
Quantifying and Modeling the Acquisition and Retention of Lumpy Skin Disease Virus by Hematophagus Insects Reveals Clinically but Not Subclinically Affected Cattle Are Promoters of Viral Transmission	27
BPIFB3 Regulates Endoplasmic Reticulum Morphology To Facilitate Flavivirus Replication	27
Epstein-Barr Virus-Encoded Latent Membrane Protein 1 and B-Cell Growth Transformation Induce Lipogenesis through Fatty Acid Synthase	27
NS5 Sumoylation Directs Nuclear Responses That Permit Zika Virus To Persistently Infect Human Brain Microvascular Endothelial Cells	26
hnRNP K Is a Novel Internal Ribosomal Entry Site-Transacting Factor That Negatively Regulates Foot-and-Mouth Disease Virus Translation and Replication and Is Antagonized by Viral 3C Protease	26
Characterization of a Novel ACE2-Based Therapeutic with Enhanced Rather than Reduced Activity against SARS-CoV-2 Variants	26
A Highly Conserved Circular RNA, circRasGEF1B, Enhances Antiviral Immunity by Regulating the miR-21-3p/MITA Pathway in Lower Vertebrates	26
Construction of a Noninfectious SARS-CoV-2 Replicon for Antiviral-Drug Testing and Gene Function Studies	26
Reassortment with Dominant Chicken H9N2 Influenza Virus Contributed to the Fifth H7N9 Virus Human Epidemic	26
Zika Virus Subgenomic Flavivirus RNA Generation Requires Cooperativity between Duplicated RNA Structures That Are Essential for Productive Infection in Human Cells	26
DDIT3 Targets Innate Immunity via the DDIT3-OTUD1-MAVS Pathway To Promote Bovine Viral Diarrhea Virus Replication	26
Differential Effect of Deleting Members of African Swine Fever Virus Multigene Families 360 and 505 from the Genotype II Georgia 2007/1 Isolate on Virus Replication, Virulence, and Induction of Protec	26
Ebola Virus Inclusion Body Formation and RNA Synthesis Are Controlled by a Novel Domain of Nucleoprotein Interacting with VP35	26
Epstein-Barr Virus Episome Physically Interacts with Active Regions of the Host Genome in Lymphoblastoid Cells	26
Genome-Wide CRISPR Screen Identifies RACK1 as a Critical Host Factor for Flavivirus Replication	26
Long-Acting BMS-378806 Analogues Stabilize the State-1 Conformation of the Human Immunodeficiency Virus Type 1 Envelope Glycoproteins	26
Mus musculus Papillomavirus 1: a New Frontier in Animal Models of Papillomavirus Pathogenesis	25

Aminopeptidase N Is an Entry Co-factor Triggering Porcine Deltacoronavirus Entry via an Endocytotic Pathway	25
A Single Amino Acid at Residue 188 of the Hexon Protein Is Responsible for the Pathogenicity of the Emerging Novel Virus Fowl Adenovirus 4	25
A Genetically Engineered Rotavirus NSP2 Phosphorylation Mutant Impaired in Viroplasm Formation and Replication Shows an Early Interaction between vNSP2 and Cellular Lipid Droplets	25
Dissecting Herpes Simplex Virus 1-Induced Host Shutoff at the RNA Level	25
Role of African Swine Fever Virus Proteins EP153R and EP402R in Reducing Viral Persistence in Blood and Virulence in Pigs Infected with BeninΔDP148R	25
Oregano Oil and Its Principal Component, Carvacrol, Inhibit HIV-1 Fusion into Target Cells	25
Complexity and Local Specificity of the Virome Associated with Tospovirus-Transmitting Thrips Species	25
Porcine Deltacoronavirus nsp5 Cleaves DCP1A To Decrease Its Antiviral Activity	25
Dual Pathways of Human Immunodeficiency Virus Type 1 Envelope Glycoprotein Trafficking Modulate the Selective Exclusion of Uncleaved Oligomers from Virions	25
Host Cellular RNA Helicases Regulate SARS-CoV-2 Infection	25
African-Lineage Zika Virus Replication Dynamics and Maternal-Fetal Interface Infection in Pregnant Rhesus Macaques	25
Reduced Nucleoprotein Availability Impairs Negative-Sense RNA Virus Replication and Promotes Host Recognition	25
Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment	25
Nonsegmented Negative-Sense RNA Viruses Utilize N ⁶ -Methyladenosine (m ⁶ A) as a Common Strategy To Evade Host	25
Aminopeptidase N Expression, Not Interferon Responses, Determines the Intestinal Segmental Tropism of Porcine Deltacoronavirus	25
Synergetic Contributions of Viral VP1, VP3, and 3C to Activation of the AKT-AMPK-MAPK-MTOR Signaling Pathway for Seneca Valley Virus-Induced Autophagy	25
Potential Role of Nonneutralizing IgA Antibodies in Cross-Protective Immunity against Influenza A Viruses of Multiple Hemagglutinin Subtypes	25
Structures of the Mononegavirales Polymerases	25
Inhibitors of Coronavirus 3CL Proteases Protect Cells from Protease-Mediated Cytotoxicity	25
Deletion of the H240R Gene of African Swine Fever Virus Decreases Infectious Progeny Virus Production Due to Aberrant Virion Morphogenesis and Enhances Inflammatory Cyto	25
Interspecies Recombination Has Driven the Macroevolution of Cassava Mosaic Begomoviruses	24
Combinational Deletions of MGF360-9L and MGF505-7R Attenuated Highly Virulent African Swine Fever Virus and Conferred Protection against Homologous Challenge	24
Epstein-Barr Virus (EBV) Tegument Protein BGLF2 Suppresses Type I Interferon Signaling To Promote EBV Reactivation	24
Selective Interferon Responses of Intestinal Epithelial Cells Minimize Tumor Necrosis Factor Alpha Cytotoxicity	24
Long Noncoding RNA IFITM4P Regulates Host Antiviral Responses by Acting as a Competing Endogenous RNA	24
Virome of Bat-Infesting Arthropods: Highly Divergent Viruses in Different Vectors	24
Nucleoside-Modified mRNA Vaccines Protect IFNAR ^–/– Mice against Crimean-Congo Hemorrhagic Fever Virus Infection	24
Fiber-1, Not Fiber-2, Directly Mediates the Infection of the Pathogenic Serotype 4 Fowl Adenovirus via Its Shaft and Knob Domains	24
The P681H Mutation in the Spike Glycoprotein of the Alpha Variant of SARS-CoV-2 Escapes IFITM Restriction and Is Necessary for Type I Interferon Resistance	24
Expression of Separate Heterologous Proteins from the Rotavirus NSP3 Genome Segment Using a Translational 2A Stop-Restart Element	24
Key Substitutions in the Spike Protein of SARS-CoV-2 Variants Can Predict Resistance to Monoclonal Antibodies, but Other Substitutions Can Modify the Effects	24
Swine ANP32A Supports Avian Influenza Virus Polymerase	24
Adnaviria : a New Realm for Archaeal Filamentous Viruses with Linear A-Form Double-Stranded DNA Genomes	23
Virome of Bat Guano from Nine Northern California Roosts	23
African Swine Fever Virus EP364R and C129R Target Cyclic GMP-AMP To Inhibit the cGAS-STING Signaling Pathway	23
Unpaired Guanosines in the 5′ Untranslated Region of HIV-1 RNA Act Synergistically To Mediate Genome Packaging	23
Epstein-Barr Virus Lytic Replication Induces ACE2 Expression and Enhances SARS-CoV-2 Pseudotyped Virus Entry in Epithelial Cells	23
Natural and Recombinant SARS-CoV-2 Isolates Rapidly Evolve In Vitro to Higher Infectivity through More Efficient Binding to Heparan Sulfate and Reduced S1/S2 Cleavage	23
Cryo-electron Microscopy Structure of S-Trimer, a Subunit Vaccine Candidate for COVID-19	23
Role of Inflammation in Virus Pathogenesis during Pregnancy	23
Coronavirus-Specific Antibody Cross Reactivity in Rhesus Macaques following SARS-CoV-2 Vaccination and Infection	23
Novel Host Recognition Mechanism of the K1 Capsule-Specific Phage of Escherichia coli : Capsular Polysaccharide as the First Receptor and Lipopolysaccharide as the Secon	23
Reverse Genetics Reveals a Role of Rotavirus VP3 Phosphodiesterase Activity in Inhibiting RNase L Signaling and Contributing to Intestinal Viral Replication In Vivo	23
An Alternatively Spliced Sirtuin 2 Isoform 5 Inhibits Hepatitis B Virus Replication from cccDNA by Repressing Epigenetic Modifications Made by Histone Lysine Methyltransferases	23
Structural Basis of Covalent Inhibitory Mechanism of TMPRSS2-Related Serine Proteases by Camostat	23
Co-opted Cellular Sac1 Lipid Phosphatase and PI(4)P Phosphoinositide Are Key Host Factors during the Biogenesis of the Tombusvirus Replication Compartment	23
Comparative Circulation Dynamics of the Five Main HIV Types in China	23
Host-Virus Chimeric Events in SARS-CoV-2-Infected Cells Are Infrequent and Artifactual	23
Host Range of Influenza A Virus H1 to H16 in Eurasian Ducks Based on Tissue and Receptor Binding Studies	23
Diverse Populations of Extracellular Vesicles with Opposite Functions during Herpes Simplex Virus 1 Infection	23
SARS-CoV-2 and Influenza A Virus Coinfections in Ferrets	23
The Andes Orthohantavirus NSs Protein Antagonizes the Type I Interferon Response by Inhibiting MAVS Signaling	23
Analysis of B Cell Receptor Repertoires Reveals Key Signatures of the Systemic B Cell Response after SARS-CoV-2 Infection	23
Transmission and Protection against Reinfection in the Ferret Model with the SARS-CoV-2 USA-WA1/2020 Reference Isolate	23
SARS-CoV-2 NSP12 Protein Is Not an Interferon-β Antagonist	23
Human Cytomegalovirus Protein UL94 Targets MITA to Evade the Antiviral Immune Response	23
The Host Response to Influenza A Virus Interferes with SARS-CoV-2 Replication during Coinfection	23
Inactivating Three Interferon Antagonists Attenuates Pathogenesis of an Enteric Coronavirus	23
Pseudorabies Virus Infection of Epithelial Cells Leads to Persistent but Aberrant Activation of the NF-κB Pathway, Inhibiting Hallmark NF-κB-Induced Proinflammatory Gene Expression	23
Simian-Human Immunodeficiency Virus SHIV.C.CH505 Persistence in ART-Suppressed Infant Macaques Is Characterized by Elevated SHIV RNA in the Gut and a High Abundance of Intact SHIV DNA in Naive CD4	22
Subtype Diversity of Influenza A Virus in North American Waterfowl: a Multidecade Study	22
5-Methylcytosine RNA Modifications Promote Retrovirus Replication in an ALYREF Reader Protein-Dependent Manner	22
Discovery and Evaluation of Entry Inhibitors for SARS-CoV-2 and Its Emerging Variants	22
Axl Deficiency Promotes the Neuroinvasion of Japanese Encephalitis Virus by Enhancing IL-1α Production from Pyroptotic Macrophages	22
Porcine Epidemic Diarrhea Virus Deficient in RNA Cap Guanine-N-7 Methylation Is Attenuated and Induces Higher Type I and III Interferon Responses	22
A Conserved Amino Acid in the C Terminus of Human Papillomavirus E7 Mediates Binding to PTPN14 and Repression of Epithelial Differentiation	22
Using SHAPE-MaP To Model RNA Secondary Structure and Identify 3′UTR Variation in Chikungunya Virus	22
hnRNPA2B1 Associated with Recruitment of RNA into Exosomes Plays a Key Role in Herpes Simplex Virus 1 Release from Infected Cells	22
NF-κB-Interacting Long Noncoding RNA Regulates HIV-1 Replication and Latency by Repressing NF-κB Signaling	22
Deletion of E184L, a Putative DIVA Target from the Pandemic Strain of African Swine Fever Virus, Produces a Reduction in Virulence and Protection against Virulent Challenge	22
Chikungunya Virus Strains from Each Genetic Clade Bind Sulfated Glycosaminoglycans as Attachment Factors	22
IRF1 Promotes the Innate Immune Response to Viral Infection by Enhancing the Activation of IRF3	22
Unique Mutations in the Murine Hepatitis Virus Macrodomain Differentially Attenuate Virus Replication, Indicating Multiple Roles for the Macrodomain in Coronavirus Replication	22
Identification of Reptarenaviruses, Hartmaniviruses, and a Novel Chuvirus in Captive Native Brazilian Boa Constrictors with Boid Inclusion Body Disease	21
NF-κB and Keap1 Interaction Represses Nrf2-Mediated Antioxidant Response in Rabbit Hemorrhagic Disease Virus Infection	21
Oral Probiotic Vaccine Expressing Koi Herpesvirus (KHV) ORF81 Protein Delivered by Chitosan-Alginate Capsules Is a Promising Strategy for Mass Oral Vaccination of Carps against KHV Infection	21
Transactivation of Herpes Simplex Virus 1 (HSV-1) Infected Cell Protein 4 Enhancer by Glucocorticoid Receptor and Stress-Induced Transcription Factors Requires Overlapping Krüppel-Like Transcription F	21
Porcine Complement Regulatory Protein CD46 Is a Major Receptor for Atypical Porcine Pestivirus but Not for Classical Swine Fever Virus	21
Supplementing the Diet with Sodium Propionate Suppresses the Severity of Viral Immuno-inflammatory Lesions	21
GBP5 Is an Interferon-Induced Inhibitor of Respiratory Syncytial Virus	21
A Biosafety Level 2 Mouse Model for Studying Betacoronavirus-Induced Acute Lung Damage and Systemic Manifestations	21
Coinfection of Chickens with H9N2 and H7N9 Avian Influenza Viruses Leads to Emergence of Reassortant H9N9 Virus with Increased Fitness for Poultry and a Zoonotic Potential	21
Human Immunodeficiency Virus-Associated Exosomes Promote Kaposi’s Sarcoma-Associated Herpesvirus Infection via the Epidermal Growth Factor Receptor	21
Coronavirus Endoribonuclease Ensures Efficient Viral Replication and Prevents Protein Kinase R Activation	21
Targeted Long-Read Sequencing Reveals Comprehensive Architecture, Burden, and Transcriptional Signatures from Hepatitis B Virus-Associated Integrations and Translocations in Hepatocellular Carcinoma C	21
Genomic Surveillance Tracks the First Community Outbreak of the SARS-CoV-2 Delta (B.1.617.2) Variant in Brazil	21
Trivalent Glycoprotein Subunit Vaccine Prevents Neonatal Herpes Simplex Virus Mortality and Morbidity	21
SARS-CoV-2 Variants of Concern Hijack IFITM2 for Efficient Replication in Human Lung Cells	21
Computationally Optimized Broadly Reactive H2 HA Influenza Vaccines Elicited Broadly Cross-Reactive Antibodies and Protected Mice from Viral Challenges	21
Divergent Symptoms Caused by Geminivirus-Encoded C4 Proteins Correlate with Their Ability To Bind NbSKη	21
Development of a Single-Cycle Infectious SARS-CoV-2 Virus Replicon Particle System for Use in Biosafety Level 2 Laboratories	21
Susceptibilities of Human ACE2 Genetic Variants in Coronavirus Infection	21
An Early Microglial Response Is Needed To Efficiently Control Herpes Simplex Virus Encephalitis	21
Route of a Multipartite Nanovirus across the Body of Its Aphid Vector	21
Development of a 3Mut-Apex-Stabilized Envelope Trimer That Expands HIV-1 Neutralization Breadth When Used To Boost Fusion Peptide-Directed Vaccine-Elicited Responses	21