Journal of Molecular Evolution

Papers
(The TQCC of Journal of Molecular Evolution is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2021-05-01 to 2025-05-01.)
ArticleCitations
Molecular Evolution of Malacostracan Short Wavelength Sensitive Opsins71
Correction: Analysis of Cancer-Resisting Evolutionary Adaptations in Wild Animals and Applications for Human Oncology43
Prebiotic N-(2-Aminoethyl)-Glycine (AEG)-Assisted Synthesis of Proto-RNA?27
Correction: Stochastic Epigenetic Modification and Evolution of Sex Determination in Vertebrates27
Modified Metabolism and Response to UV Radiation: Gene Expression Variations Along an Elevational Gradient in the Asiatic Toad (Bufo gargarizans)21
Extant Sequence Reconstruction: The Accuracy of Ancestral Sequence Reconstructions Evaluated by Extant Sequence Cross-Validation20
Learning from the Codon Table: Convergent Recoding Provides Novel Understanding on the Evolution of A-to-I RNA Editing19
An Ultimate Question for Functional A-to-I mRNA Editing: Why Not a Genomic G?18
The Ancient Origins of Death Domains Support the ‘Original Sin’ Hypothesis for the Evolution of Programmed Cell Death16
Unusual Evolution of Cephalopod Tryptophan Indole-Lyases15
Post-Subfunctionalization Functions of HIF-1αA and HIF-1αB in Cyprinid Fish: Fine-Tuning Mitophagy and Apoptosis Regulation Under Hypoxic Stress14
Scaling up Functional Analyses of the G Protein-Coupled Receptor Rhodopsin14
Embracing Complexity: Yeast Evolution Experiments Featuring Standing Genetic Variation14
dN/dS-H, a New Test to Distinguish Different Selection Modes in Protein Evolution and Cancer Evolution13
Overlaps Between CDS Regions of Protein-Coding Genes in the Human Genome: A Case Study on the NR1D1-THRA Gene Pair13
Organophosphorus Compound Formation Through the Oxidation of Reduced Oxidation State Phosphorus Compounds on the Hadean Earth13
Odorant-Binding and Chemosensory Proteins in Fig Wasps: Evolutionary Insights From Comparative Studies13
Evolution of Transcript Abundance is Influenced by Indels in Protein Low Complexity Regions11
On the Nature of the Last Common Ancestor: A Story from its Translation Machinery11
On Protein Loops, Prior Molecular States and Common Ancestors of Life10
Pheromone Gene Diversification and the Evolution of Courtship Glands in Plethodontid Salamanders9
Phylogenetic and Evolutionary Analysis of Plant Small RNA 2′-O-Methyltransferase (HEN1) Protein Family9
Molecular Footprints on Osmoregulation-Related Genes Associated with Freshwater Colonization by Cetaceans and Sirenians8
Biochemical Property Based Positional Matrix: A New Approach Towards Genome Sequence Comparison8
Detecting Selection on Segregating Gene Duplicates in a Population8
RNA or DNA? Revisiting the Chemical Nature of the Cenancestral Genome8
A Closer Look at Non-random Patterns Within Chemistry Space for a Smaller, Earlier Amino Acid Alphabet8
Functional Diversity of the Lepidopteran ATP-Binding Cassette Transporters8
Informatic Capabilities of Translation and Its Implications for the Origins of Life7
Understanding the Origin and Evolution of Tea (Camellia sinensis [L.]): Genomic Advances in Tea7
Conservation of Protein Kinase A Substrates in the Cnidarian Coral Spermatozoa Among Animals and Their Molecular Evolution7
Best Practices in Designing, Sequencing, and Identifying Random DNA Barcodes7
The Last Universal Common Ancestor of Ribosome-Encoding Organisms: Portrait of LUCA7
GC Content Across Insect Genomes: Phylogenetic Patterns, Causes and Consequences7
The De Novo Emergence of Two Brain Genes in the Human Lineage Appears to be Unsupported7
Adaptation and Exaptation: From Small Molecules to Feathers7
PAReTT: A Python Package for the Automated Retrieval and Management of Divergence Time Data from the TimeTree Resource for Downstream Analyses6
Correction: Sequence Divergence in Venom Genes Within and Between Montane Pitviper (Viperidae: Crotalinae: Cerrophidion) Species is Driven by Mutation–Drift Equilibrium6
Evolution and Functional Diversification of Serine Racemase Homologs in Bacteria6
The Evolutionary Fate of Mitochondrial Aminoacyl-tRNA Synthetases in Amitochondrial Organisms6
Promiscuous Domains in Eukaryotes and HAT Proteins in FUNGI Have Followed Different Evolutionary Paths6
Biothermodynamics of Hemoglobin and Red Blood Cells: Analysis of Structure and Evolution of Hemoglobin and Red Blood Cells, Based on Molecular and Empirical Formulas, Biosynthesis Reactions, and Therm6
A Law of Redundancy Compounds the Problem of Cancer and Precision Medicine6
EasyDIVER + : An Advanced Tool for Analyzing High Throughput Sequencing Data from In Vitro Evolution of Nucleic Acids or Amino Acids6
A New View of the Last Universal Common Ancestor6
Context-Dependent Mutation Dynamics, Not Selection, Explains the Codon Usage Bias of Most Angiosperm Chloroplast Genes5
Evidence for Multiple Independent Expansions of Fox Gene Families Within Flatworms5
Costly circRNAs, Effective Population Size, and the Origins of Molecular Complexity5
Correction: Principles of Molecular Evolution: Concepts from Non-equilibrium Thermodynamics for the Multilevel Theory of Learning5
Selection Pressure Regulates the Evolution-Structure–Function Paradigm of Monocyte Chemoattractant Protein Family5
Molecular Evolution of clock Genes in Vertebrates5
Origins and Functional Significance of Eukaryotic Protein Folds5
Deep Conservation and Unexpected Evolutionary History of Neighboring lncRNAs MALAT1 and NEAT15
Main Factors Shaping Amino Acid Usage Across Evolution5
Putative MutS2 Homologs in Algae: More Goods in Shopping Bag?5
Evolutionary Nonindependence Between Human piRNAs and Their Potential Target Sites in Protein-Coding Genes5
Jump-Chain Simulation of Markov Substitution Processes Over Phylogenies5
Analysis of the MCTP Amino Acid Sequence Reveals the Conservation of Putative Calcium- and Lipid-Binding Pockets Within the C2 Domains In Silico5
FEZF2 and AIRE1: An Evolutionary Trade-off in the Elimination of Auto-reactive T Cells in the Thymus5
Reenacting the Birth of a Function: Functional Divergence of HIUases and Transthyretins as Inferred by Evolutionary and Biophysical Studies5
The Mystery of Cancer Resistance: A Revelation Within Nature5
Transposable Element Diversity Remains High in Gigantic Genomes5
Tracking the Diversity and Chromosomal Distribution of the Olfactory Receptor Gene Repertoires of Three Anurans Species5
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