Journal of Microscopy

Article	Citations
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TOC ‐ Issue Information	37
Self‐pressurised rapid freezing at arbitrary cryoprotectant concentrations	29
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High‐speed 4‐dimensional scanning transmission electron microscopy using compressive sensing techniques	18
TOC ‐ Issue Information	18
Innovating in a bioimaging core through instrument development	17
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Laboratory phase‐contrast nanotomography of unstained Bombus terrestris compound eyes	17
A method for crystallographic mapping of an alpha‐beta titanium alloy with nanometre resolution using scanning precession electron diffraction and open‐source software libraries	16
Seeing clearly – Plant anatomy through Katherine Esau's microscopy lens	15
Study on line‐scan profile for a trapezoid line under varying sample temperatures through Monte–Carlo simulation	15
Integrated opto‐mechanical cantilever sensor with a rib waveguide	14
A practical guide to bioimaging research data management in core facilities	14
Pairwise interaction Markov model for 3D epidermal nerve fibre endings	14
TOC ‐ Issue Information	13
Multi‐foci parallelised RESOLFT nanoscopy in an extended field‐of‐view	12
A method for extraction of exosomes from breast tumour cells and characterisation by transmission electron microscopy	12
High‐pressure freezing of mechanically stretched cells	12
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ApoNecV: A macro for cell death type differentiation	11
Poly‐L‐lysine/hyaluronan nanocarriers as a novel nanosystem for gene delivery	11
In‐depth polarisation resolved SHG microscopy in biological tissues using iterative wavefront optimisation	11
Towards affordable biomedical imaging: Recent advances in low‐cost, high‐resolution optoacoustic microscopy	10
Seven‐layer analysis model of an optical waveguide excitation fluorescence microscopy	10

Quantification of cell shape, intracellular flows and transport based on DIC object detection and tracking	10
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High‐accuracy, direct aberration determination using self‐attention‐armed deep convolutional neural networks	9
Simple automation of SEM‐EDS spectral maps analysis with Python and the edxia framework	9
Automated Euler number of the alveolar capillary network based on deep learning segmentation with verification by stereological methods	8
Adsorption of PCE in alkali‐activated materials analysed by fluorescence microscopy	8
Subsurface phase imaging of tapping‐mode atomic force microscopy at phase resonance	8
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Subcellular localisation and identification of single atoms using quantitative scanning transmission electron microscopy	8
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TOC ‐ Issue Information	8
Characterisation of bond between cement paste and steel fibres with different surface roughness using SEM	8
Repair effect of Centella asiatica (L.) extract on damaged HaCaT cells studied by atomic force microscopy	8
CellPhePy: A python implementation of the CellPhe toolkit for automated cell phenotyping from microscopy time‐lapse videos	8
Investigation of the interface of fungal mycelium composite building materials by means of low‐vacuum scanning electron microscopy	7
Surpassing light inhomogeneities in structured‐illumination microscopy with FlexSIM	7
Use of Melinex film for flat embedding tissue sections in LR White	7
Multicamera simultaneous total internal reflection and interference reflection microscopy	7
Using the traditional microscope for mineral grain orientation determination: A prototype image analysis pipeline for optic‐axis mapping (POAM)	7
Single‐shot differential phase contrast microscopy using ring‐shaped polarisation multiplexing illumination	7
Microscopy at a glance: New poster article series exploring the intersection of art, science and imaging	7
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Microtexture analysis of copper‐doped iron oxide thin films prepared by air pneumatic spray	6
Morphological and structural analysis of iron‐rich porcelains excavated from the Jian kiln site of Song dynasty	6
Material characteristics of historic scagliola interiors in Vienna: A view through the microscope	6
In memoriam – Hans Jørgen Gottlieb Gundersen	6
Flexible implementation of modulated localisation microscopy based on DMD	6
Challenges and advances in optical 3D mesoscale imaging	6
Automatic detection of Kikuchi bands based on Radon transform and PPHT	6
Open‐source hardware‐ and software‐based cryomicroscopy system for investigation of phase transitions in cryobiological research	6
A perspective of fluorescence microscopy for cellular structural biology with EGFR as witness	6
Fluorescence microscopic investigation of PCE superplasticiser adsorption in calcined clay blended cement	6
ToTEM: A software for fast TEM image simulation	6
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TOC ‐ Issue Information	6
TOC ‐ Issue Information	5
Correction to ‘Non‐fitting FLIM‐FRET facilitates analysis of protein interactions in live Zebrafish embryos’	5
Unveiling the limits of precision in iterative MINFLUX	5
Comparison of holotomographic microscopy and coherence‐controlled holographic microscopy	5
A Python tool to determine the thickness of the hydrate layer around clinker grains using SEM‐BSE images	5
Correction to “Image quality evaluation for FIB‐SEM images”	5
Quantitative analysis of human umbilical vein endothelial cell morphology and tubulogenesis	5
Primed conversion: The emerging player of precise and nontoxic photoconversion	5
Microscopic investigation of the optical and morphological properties of iPP/TiO2 nanocomposite fibres using computed tomography technique	5
Elemental mapping of labelled biological specimens at intermediate energy loss in an energy‐filtered TEM acquired using a direct detection device	5
Corrigendum	5
An automated slide scanning system for membrane filter imaging in diagnosis of urogenital schistosomiasis	5

Made to measure: An introduction to quantifying microscopy data in the life sciences	4
A case study of distress mechanism(s) in a concrete structure foundation in the saturated zone and above the saturated zone	4
TOC ‐ Issue Information	4
Detecting charge transfer at defects in 2D materials with electron ptychography	4
Implications of gnomonic distortion on electron backscatter diffraction and transmission Kikuchi diffraction	4
Comparative study on the Ru ware, Ru‐type ware of Qingliangsi kiln and celadon of Zhanggongxiang kiln	4
Semi‐automatic stitching of filamentous structures in image stacks from serial‐section electron tomography	4
Comparison of microstructural imaging of the root canal isthmus using propagation‐based X‐ray phase‐contrast and absorption micro‐computed tomography	4
An integrated optical waveguide micro‐cantilever system for chip‐based AFM	4
Non‐fitting FLIM‐FRET facilitates analysis of protein interactions in live zebrafish embryos	4
TUNA‐EBSD‐CL correlative multi‐microscopy study, on the example of Cu(In,Ga)S2 solar cell absorber	4
The effect of the combined addition of copper, lithium and sulphur on the formation of Portland cement clinker	4
TOC ‐ Issue Information	4
Kikuchi pattern simulations of backscattered and transmitted electrons	4
Cryo‐SEM and large volume FIB‐SEM of Arabidopsis cotyledons: Degradation of lipid bodies, biogenesis of glyoxysomes and reorganisation of organelles during germination	4
Characterisation and correction of polarisation effects in fluorescently labelled fibres	4
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PUMA – An open‐source 3D‐printed direct vision microscope with augmented reality and spatial light modulator functions	4
Automated particle recognition for engine soot nanoparticles	3
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Quantification of surface grinding during the sample preparation of cementitious materials by optical profilometry	3
Diversity under the microscope: Lessons for building belonging in interdisciplinary spaces from the Women in Imaging + Industry bootcamp	3
TOC ‐ Issue Information	3
The structure of the eggshell and eggshell membranes of Crocodylus niloticus	3
The incorporation of Cu into the clinker phases	3
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Diagnostic electron microscopy in human infectious diseases – Methods and applications	3
The Journal of Microscopy would like to thank all those referees who reviewed papers for the Journal during 2021. Your assistance and contribution to the Journal is greatly apprec	3
Handheld cross‐polarised microscope for imaging individual pigmented cells in human skin in vivo	3
Data analysis in imaging (DAIM) – A new RMS science section	3
Image quality evaluation for FIB‐SEM images	3
Influence of alumina ratio on reactions at the surface of alite crystals during cooling	3
Comparison of the SMLM technique and the MSSR algorithm in confocal microscopy for super‐resolved imaging of cellulose fibres	3
TOC ‐ Issue Information	3
Quantifying phase magnitudes of open‐source focused‐probe 4D‐STEM ptychography reconstructions	3
Staying on track – Keeping things running in a high‐end scientific imaging core facility	3
Estimating microstructural feature distributions from image data using a Bayesian framework	3
Comparison of the effects of AgNPs on the morphological and mechanical characteristics of cancerous cells	3
Accelerating iterative ptychography with an integrated neural network	2
Several factors influencing energy‐loss near‐edge structure calculations using Wien2k	2
Important aspects of investigating optical excitations in semiconductors using a scanning transmission electron microscope	2
Overcoming the challenges of preserving lipid‐richCannabis sativaL. glandular trichomes for transmission electron microscopy	2
More than just ‘added value’: The perils of not establishing shared core facilities in resource‐constrained communities	2
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A new approach to etching low‐carbon microalloyed steels to reveal prior austenite grain boundaries and the dual‐phase microstructure	2
Investigation of trapped charges profile for an irradiated insulated material	2
Identifying rotational symmetry axes in Kikuchi patterns by reciprocal vectors	2
Quantifying superimposed protein flow dynamics in live cells using spatial filtering and spatiotemporal image correlation spectroscopy	2
Setting up an institutional OMERO environment for bioimage data: Perspectives from both facility staff and users	2
Improving light microscopy training routines with evidence‐based education	2
The fertility tracks of pollen tube in the ovary of Solanum nigrum by three‐dimensional reconstruction	2
A method for the fast and photon‐efficient analysis of time‐domain fluorescence lifetime image data over large dynamic ranges	2
Electrolyte pH dependence of composition, roughness parameters, particle diameter and magnetic features of nanostructured Fe‐Co‐Ni/ITO deposits prepared by electrochemical deposition method	2
Sulphate resistance of low‐clinker engineered cementitious composites examined by MicroXRF imaging	2
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Improving Cavalieri volume estimation based on non‐equidistant planar sections: The trapezoidal estimator	2
Resolution enhancement of total internal reflection microscopy via polarised scattering	2
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TOC ‐ Issue Information	2
ModularImageAnalysis (MIA): Assembly of modularised image and object analysis workflows in ImageJ	2
TOC ‐ Issue Information	2
Preface to EMABM (Euroseminar on Microscopy Applied to Building Materials) 2022	2
Two‐stage particle separation channel based on standing surface acoustic wave	2
Introduction to Festschrift for Professor Tony Wilson	2
Differential phase contrast (DPC) mapping electric fields: Optimising experimental conditions	2
TOC ‐ Issue Information	2
Slags from roasting of antimony ore in the Brioude‐Massiac (France) area used as aggregates: An early example of circular economy	2
Suborganellar resolution imaging for the localisation of human glycosylation enzymes in tobacco Golgi bodies	2
TOC ‐ Issue Information	2
Application of various microscopy techniques to study early‐age and longer‐term behaviour of super sulphated cement microstructure	2
Investigations on lightweight concrete by in situ compression tests using high‐resolution computed tomography (μ‐CT)	2
TOC ‐ Issue Information	2
Live cell imaging of plant infection provides new insight into the biology of pathogenesis by the rice blast fungus Magnaporthe oryzae	2
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Real‐time monitoring of carbonation of hardened cement pastes using Raman microscopy	2
Clinker based on calcium looped meals from the Cleanker Project	2
3D microscopy in industrial measurements	2
Trainable segmentation for transmission electron microscope images of inorganic nanoparticles	2
Microscopical palynology: Birch woodland expansion and species hybridisation coincide with periods of climate warming during the Holocene epoch in Iceland	2

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TOC ‐ Issue Information	2
Correction and quantification of MTF in scanning laser microscopy	2
Carbon‐film‐based Zernike phase plates with smooth thickness gradient for phase‐contrast transmission electron microscopy with reduced fringing artefacts	2
In situ quantification of ribosome number by electron tomography	2