Journal of Medical Microbiology

Article	Citations
Explore intersection genes of oxymatrine and COVID-19 with lung cancer as potential therapeutic targets based on network pharmacology	85
Mycoplasma affects baseline gene expression and the response to glucocorticoids in vocal fold fibroblasts	81
High levels of multidrug-resistant isolates of genetically similar Salmonella 1,4, [5],12:I:- from Brazil between 1983 and 2020	74
Profile of specific antibodies to the SARS-CoV-2	67
Comparative analyses of clinical features reveal the severity of human adenovirus type 55 and type 7 in acute respiratory tract infections	52
Emergence of a multidrug-resistant plasmid encoding bla NDM-1, bla OXA-420 and armA in a clinical isolate of Acinetobacter variabilis in Japan	31
Impact of the COVID-19 restrictions on the epidemiology of Cryptosporidium spp. in England and Wales, 2015–2021: a time series analysis	23
Network pharmacology and molecular docking analysis on mechanisms of Tibetan Hongjingtian (Rhodiola crenulata) in the treatment of COVID-19	22
Multi-site analysis of biosynthetic gene clusters from the periodontitis oral microbiome	21
Genomic characterization of Haemophilus influenzae harbouring an exogenous resistance gene	21
Genetic variations of penicillin-binding protein 1A: insights into the current status of amoxicillin-based regimens for Helicobacter pylori eradication in Malaysia	20
JMM Profile: Tick-borne encephalitis virus	20
Bacterial secretions in growth medium stimulate the mouse respiratory innate immune response	19
Antimicrobial resistance genes and genetic characteristics of multidrug-resistant Escherichia coli in a veterinary hospital in Taiwan	19
Pharmacodynamics of colistin resistance in carbapenemase-producing Klebsiella pneumoniae: the double-edged sword of heteroresistance and adaptive resistance	19
Additional C-type lectin receptors mediate interactions with Pneumocystis organisms and major surface glycoprotein	17
Malaria vaccines to moderate the impact of antibiotic resistance in endemic countries	17
Microbiome analysis of feline odontoclastic resorptive lesion (FORL) and feline oral health	17
The foundations of aetiology: a common language for infection science	17
JMM Profile: Bacillus anthracis	16
Molecular mechanism of Enteroaggregative Escherichia coli induced apoptosis in cultured human intestinal epithelial cells	16
Anti-tumour effect of Huangqin Decoction on colorectal cancer mice through microbial butyrate mediated PI3K/Akt pathway suppression	16
Evaluation of the World Health Organization Global Invasive Bacterial Vaccine-Preventable Disease (IB-VPD) Surveillance Network’s Laboratory External Quality Assessment Programme, 2014–2019	15
A simple PCR assay for the identification of the novel Streptococcus pneumoniae serotype 7D	15
Combined oropharyngeal/nares and nasopharyngeal swab sampling remain effective for molecular detection of SARS-CoV-2 Omicron variant	15

Unique intestinal microflora and metabolic profile in different stages of hypertension reveal potential biomarkers for early diagnosis and prognosis	15
Evaluation of anti-biofilm effect of antimicrobial sonodynamic therapy-based periodontal ligament stem cell-derived exosome-loaded kojic acid on Enterococcus faecalis biofilm	15
Genomic oropharyngeal Neisseria surveillance detects MALDI-TOF MS species misidentifications and reveals a novel Neisseria cinerea clade	15
2020: the year of living cautiously	14
An alternative strategy to increasing influenza virus replication for vaccine production in chicken embryo fibroblast (DF-1) cells by inhibiting interferon alpha and beta using peptide-conjugated phos	14
Implication of COVID-19 pandemic on the incidence of Clostridioides difficile infection in a Greek tertiary hospital	14
Antimicrobial resistance and molecular characterization of gene cassettes from class 1 integrons in Salmonella strains	13
Treating autism spectrum disorder by intervening with gut microbiota	13
Haemophilus influenzae type f in the post-Haemophilus influenzae type b vaccination era: a systematic review	13
Animal and Plant Health Agency Disinfection Webinar, November 2021	13
Deletion of codY impairs Staphylococcus epidermidis biofilm formation, generation of viable but non-culturable cells and stimulates cytokine production in human macrophages	13
Clinical efficacy and safety of antifungal drugs for the treatment of Candida parapsilosis infections: a systematic review and network meta-analysis	12
Characterization of a carbapenem-resistant Citrobacter amalonaticus coharbouring bla IMP-4 and qnrs1 genes	12
Sensitivity and specificity of DPP® Fever Panel II Asia in the diagnosis of malaria, dengue and melioidosis	12
Clinical features relating to pneumococcal colony phase variation in hospitalized adults with pneumonia	12
Environmental and clinical isolates of Herbaspirillum induce pulmonary infection in mice and its secretome is cytotoxic to human lung cells	12
Integrated analysis of intestinal microbiota and host gene expression in colorectal cancer patients	11
Genomic characterization of colistin resistance in Klebsiella spp. under the pressure of colistin	11
MARGINAL NOTES, March 2023 – point of care?	11
Differential susceptibility of airway and ocular surface cell lines to FlhDC-mediated virulence factors PhlA and ShlA from Serratia marcescens	11
A comparison of qPCR and microscopy for the detection and enumeration of Cryptosporidium oocysts from drinking water	11
Antimicrobial resistance, molecular characteristics, virulence and pathogenicity of bla NDM-1-positive Enterobacter cloacae	11
Rapid macrolide and amikacin resistance testing for Mycobacterium abscessus in people with cystic fibrosis	11
The characterisation of antimicrobial resistant Escherichia coli from dairy calves	11
A systematic approach to microbial forensics	10
To zinc or not to zinc for COVID-19 prophylaxis or treatment?	10
Promising activity of etomidate against mixed biofilms of fluconazole-resistant Candida albicans and methicillin-resistant Staphylococcus aureus	10
Hospital transmission of borderline oxacillin-resistant Staphylococcus aureus evaluated by whole-genome sequencing	10
Antimicrobial resistance patterns among critical priority pathogens in an intensive care unit at a tertiary hospital in Egypt: a descriptive analysis comparing pre- and COVID-19 eras	10
Analysis of the antimicrobial resistance gene frequency in whole-genome sequenced Vibrio from Latin American countries	10
Performance of a loop-mediated isothermal amplification assay (Isoplex CRE-ART) to detect common carbapenemase-encoding genes in Gram-negative bacteria	10
Adaptation of gltA and ssrA assays for diversity profiling by Illumina sequencing to identify Bartonella henselae, B. clarridgeiae and B. koehlerae	10
Insights into the challenging multi-country outbreak of Mpox: a comprehensive review	10
The rare Salmonella enterica serovar Isangi: genomic characterization of the antimicrobial resistance, virulence potential and epidemiology of Brazilian strains in comparison to global isolates	10
Evaluation of a novel chromogenic screening method for detection of carbapenem-resistant Escherichia coli	10
Diagnosis and clinical significance of Human bocavirus 1 in children hospitalized for lower acute respiratory infection: molecular detection in respiratory secretions and serum	9
Changes in serum amyloid A, plasma high-density lipoprotein cholesterol and apolipoprotein A-I as useful biomarkers for Mycobacterium tuberculosis infection	9
Plant-associated Pseudomonas aeruginosa strains harbour multiple virulence traits critical for human infection	9
Lipopolysaccharide from biofilm-forming Pseudomonas aeruginosa PAO1 induces macrophage hyperinflammatory responses	9
Changes in the expression of miR-103a and miR-21: a functional diagnosis of toxocariasis in rats	9
mgpB genotyping and genetic diversity for antimicrobial resistance of Mycoplasma genitalium	9
Class 1 integrons in clinical and swine industry isolates of Salmonella Typhimurium from Colombia, dating 1997 to 2017	9
Antimicrobial resistance profiles and genome characteristics of Klebsiella isolated from the faeces of neonates in the neonatal intensive care unit	9
Serum biomarkers to differentiate Gram-negative, Gram-positive and fungal infection in febrile patients	9
JMM Profile: Bordetella pertussis and whooping cough (pertussis): still a significant cause of infant morbidity and mortality, but vaccine-preventable	9
Impact of COVID-19 on tuberculosis services: an experience from a tertiary care hospital	8
In vitro synergistic activity of aztreonam (AZT) plus novel and old β-lactamase inhibitor combinations against metallo-β-lactamase-producing AZT-resistant Enterobacterales	8
Phenotypic characterization of Eimeria tenella-specific chicken T-cells responding to in vitro parasite antigen re-stimulation	8
Phenotypic and genetic characteristics of Streptococcus mutans isolates from site-specific dental plaque in China	8
JMM Profile: Brachyspira species: the causative agent of Avian Intestinal Spirochaetosis	8

Clinical evaluation of a fully automated, laboratory-developed multiplex RT-PCR assay integrating dual-target SARS-CoV-2 and influenza A/B detection on a high-throughput platform	8
Rhein kills Actinobacillus pleuropneumoniae, reduces biofilm formation, and effectively treats bacterial lung infections in mice	8
Non-typhoidal Salmonella bacteremia: comparison of adults and children in a single medical center	8
Impact of extreme weather events on the occurrence of infectious diseases in Belgium from 2011 to 2021	8
Altered intestinal Streptococcus anginosus and 5α-reductase gene levels in patients with hepatocellular carcinoma and elevated Bacteroides stercoris in atezolizumab/bevacizumab non-responders	8
Detection and partial characterization of extracellular inducers of persistence in Staphylococcus epidermidis and Staphylococcus aureus	8
JMM profile: rifampicin: a broad-spectrum antibiotic	7
Altered gut microbial profiles in drug-treated rats with alcoholic heart disease	7
Is Panton–Valentine leucocidin (PVL) toxin associated with poor clinical outcomes in patients with community-acquired Staphylococcus aureus bacteraemia?	7
Performance of targeted next-generation sequencing in the detection of respiratory pathogens and antimicrobial resistance genes for children	7
Macrolide resistance is pervasive in oral streptococci in the Belgian general population: a cross-sectional survey	7
Antimicrobial spectrum against wound pathogens and cytotoxicity of star-arranged poly-l-lysine-based antimicrobial peptide polymers	7
Environment in the lung of cystic fibrosis patients stimulates the expression of biofilm phenotype in Mycobacterium abscessus	7
Antibacterial activity of menadione alone and in combination with oxacillin against methicillin-resistant Staphylococcus aureus and its impact on biofilms	7
In vitro activity of bedaquiline against Mycobacterium avium complex	7
Prebiotics and probiotics for autism spectrum disorder: a systematic review and meta-analysis of controlled clinical trials	7
Frequency of and risk factors for carbapenem-resistant Enterobacteriaceae	7
Identification of consensus head and neck cancer-associated microbiota signatures: a systematic review and meta-analysis of 16S rRNA and The Cancer Microbiome Atlas datasets	7
An end-point multiplex RT-PCR for SARS-CoV-2, Influenza A and B detection, including simultaneous RNAse P amplification: a timely tool for more accessible differential diagnosis	7
Serological status for TORCH in women of childbearing age: a decade-long surveillance (2012–2022) in Italy	7
Sample collection and transport strategies to enhance yield, accessibility, and biosafety of COVID-19 RT-PCR testing	7
JMM Profile: Streptococcus pneumoniae: sugar-coated captain of the men of death	7
Susceptibility of Gram-negative bacteria from blood cultures assessed by a rapid antimicrobial susceptibility assay, the VITEK® Reveal™: a preliminary study	6
Machine learning for identifying resistance features of Klebsiella pneumoniae using whole-genome sequence single nucleotide polymorphisms	6
The bacteriology of diabetic foot ulcers and infections and incidence of Staphylococcus aureus Small Colony Variants	6
Dysbiosis–epigenetics–immune system interaction and ageing health problems	6
Sayonara from the outgoing JMM co-Editors-in-Chief	6
A stop–gain mutation in sigma factor SigH (MAB_3543c) may be associated with tigecycline resistance in Mycobacteroides abscessus	6
Evaluation of metal-based antimicrobial compounds for the treatment of bacterial pathogens	6
Performance of metagenomic next-generation sequencing for microbiological diagnosis of infectious uveitis	6
Introducing JMM Profiles for the Journal of Medical Microbiology	6
Characterization of invasive meningococcal disease case isolates in Atlantic Canada, 2014 to 2020: spatial–temporal variations of clones and predicted meningococcal B vaccine coverage	6
Predominance of community-associated, methicillin-susceptible Staphylococcus aureus infections among hospitalized children and adolescents	6
RshA mutations contributing to tigecycline resistance in Mycobacteroides abscessus	6
The first UK report of a rare Cryptosporidium hominis genetic variant isolated during a complex Scottish swimming pool outbreak	6
An antipathogenic compound that targets the OxyR peroxide sensor in Pseudomonas aeruginosa	6
Unveiling the complexity of rifampicin drug susceptibility testing in Mycobacterium tuberculosis: comparative analysis with next-generation sequencing	6
Clinically healthy household dogs and cats as carriers of multidrug-resistant Salmonella enterica with variable R plasmids	5
Aspiration pneumonia after SARS-CoV-2 Omicron infection frequently induced physical functional decline in Japan	5
MARGINAL NOTES, April 2023. Learning to breathe again	5
Prevalence of genotypic antimicrobial resistance in clinical Shiga toxin-producing Escherichia coli in Norway, 2018 to 2020	5
Saliva sampling and its direct lysis is an excellent option for SARS-CoV-2 diagnosis in paediatric patients: comparison with the PanBio COVID-19 antigen rapid test in symptomatic and asymptomatic chil	5
Sickle cell disease children’s gut colonization by extended-spectrum β-lactamase (ESBL)-producing Enterobacterales: an antibiotic prophylaxis effect?	5
Detection of avian reovirus (ARV) by ELISA based on recombinant σB, σC and σNS full-length proteins and protein fragments	5
Correlation analysis for alterations of intestinal flora in hepatocellular carcinoma patients: combinatorial detection of Coriobacterium, Atopobium, Coprococcus and Veillonella dispar may be a new met	5
Next-generation sequencing for the diagnosis of Listeria monocytogenes meningoencephalitis: a case series of five consecutive patients	5
In vitro and in silico assessment of anti-biofilm and anti-quorum sensing properties of 2,4-Di-tert butylphenol against Acinetobacter baumannii	5
Quantification of Vibrio cholerae cholix exotoxin by sandwich bead-ELISA	5
BCG and BCGΔBCG1419c transiently protect hypersusceptible I/St mice and induce different influx of macrophages and neutrophils during pulmonary tuberculosis	5
Symptoms and PCR testing interval for bacterial pathogens in patients with diarrhoea	5
Surveillance of carbapenem-resistant Klebsiella pneumoniae in a paediatric hospital in China revealed the dynamics of carbapenemase and the prevalence of ST2735 K. pneumoniae	5
Serotypes and antimicrobial resistance of Streptococcus pneumoniae in children under 5 years of age pre- and post-pneumococcal conjugate vaccine introduction in Paraguay	5
JMM Profile: Sindbis virus, a cause of febrile illness and arthralgia	5
Sensitivity of the acute flaccid paralysis surveillance system for poliovirus in South Africa, 2016–2019	5
Effects of calcineurin inhibitors, cyclosporine A and tacrolimus (FK506), on the activity of antifungal drugs against Candida spp.	5
Immunization with a bicistronic DNA vaccine modulates systemic IFN-γ and IL-10 expression against Vibrio cholerae infection	5
Variations in oral microbiome and its predictive functions between tumorous and healthy individuals	5
Antimicrobial resistance and multilocus sequence types of Stenotrophomonas maltophilia isolated from dogs and cats in Japan	5
Corrigendum: Stenotrophomonas maltophilia phenotypic and genotypic features through 4-year cystic fibrosis lung colonization	5
The landscape of bacterial antibiotic susceptibility in a multi-tier ophthalmology network in India: an electronic medical record driven analytics report	5
JMM Profile: Avian influenza: a veterinary pathogen with zoonotic potential	5
Emergence of mgrB locus deletion mediating polymyxin resistance in pandemic KPC-producing Klebsiella pneumoniae ST15 lineage	5
Bacteria associated with infectious keratoconjunctivitis outbreak in confined lambs	5
JMM Profile: Swine influenza A virus: a neglected virus with pandemic potential	5
JMM Profile: West Nile virus	5
Effect of antifungal agents, lysozyme and human antimicrobial peptide LL-37 on clinical Candida isolates with high biofilm production	4
Clostridioides difficile detection and infection in children: are they just small adults?	4
8-Hydroxyquinoline derivative as a promising antifungal agent to combat ocular fungal infections	4
Impact of pH on growth of Staphylococcus epidermidis and Staphylococcus aureus in vitro	4
Performance of CHROMagar ESBL media for the surveillance of extended-spectrum cephalosporin-resistant Enterobacterales (ESCrE) from rectal swabs in Botswana	4
Massive sequencing of the V3–V4 hypervariable region of bronchoalveolar lavage from patients with COVID-19 and VAP reveals the collapse of the pulmonary microbiota	4
First identification of bla NDM-5 producing Escherichia coli from neonates and a HIV infected adult in Tanzania	4
Engineering of the LAMP-CRISPR/Cas12b platform for Chlamydia psittaci detection	4
The human bile salt sodium deoxycholate induces metabolic and cell envelope changes in Salmonella Typhi leading to bile resistance	4
Clinical and public health implications of increasing notifications of LEE-negative Shiga toxin-producing Escherichia coli in England, 2014–2022	4
Thymidine utilisation pathway is a novel phenotypic switch of Mycoplasma hominis	4
A longitudinal study of antibody responses to selected host antigens in rheumatic fever and rheumatic heart disease	4
The state of play of rodent models for the study of Clostridioides difficile infection	4
Development of an immunochromatographic lateral flow assay to rapidly detect OXA-23-, OXA-40-, OXA-58- and NDM-mediated carbapenem resistance determinants in Acinetobacter baumannii	4
Characterization of invasive Group B Streptococcus isolates from Western Australian infants, 2004–2020	4

Novel automated antifungal susceptibility testing system for yeasts based on dual-detection algorithm of turbidimetry and colorimetry	4
Antifungal potential of silver nanoparticles stabilized with the flavonoid naringenin	4
Transcriptome analysis of Candida albicans planktonic cells in response to plasma medicine	4
Volatile compounds from in vitro metabolism of seven Listeria monocytogenes isolates belonging to different clonal complexes	4
Efficacy of ceftobiprole in a murine model of bacteremia and disseminated infection	4
Utility of in-house and commercial PCR assay in diagnosis of Covid-19 associated mucormycosis in an emergency setting in a tertiary care center	4
Diazepam’s antifungal activity in fluconazole-resistant Candida spp. and biofilm inhibition in C. albicans: evaluation of the relationship with the proteins ALS3 and SAP5	4
Microbiome depiction through user-adapted bioinformatic pipelines and parameters	4
Clinical relevance and antimicrobial susceptibility profile of the unknown human pathogen Corynebacterium aurimucosum	4
A large food-borne outbreak of campylobacteriosis in kindergartens and primary schools in Pescara, Italy, May–June 2018	4
Legionellapneumophila induces methylomic changes in ten-eleven translocation to ensure bacterial reproduction in human lung epithelial cells	4
Sertraline has in vitro activity against both mature and forming biofilms of different Candida species	4
Citrobacter koseri stimulates dendritic cells to induce IL-33 expression via abundant ATP production	4
CXCR2 perturbation promotes Staphylococcus aureus implant-associated infection	4
Genomic and metabolic versatility of Pseudomonas aeruginosa contributes to its inter-kingdom transmission and survival	4
Bioarchaeological investigation of individuals with suspected multibacillary leprosy from the mediaeval leprosarium of St Mary Magdalen, Winchester, Hampshire, UK	4
Characterization of the follicular fluid microbiota based on culturomics and sequencing analysis	4
Difference in drug susceptibility distribution and clinical characteristics between Mycobacterium avium and Mycobacterium intracellulare lung diseases in Shanghai, China	4
Development and evaluation of Microbe Finder (MiFi)®: a novel in silico diagnostic platform for pathogen detection from metagenomic data	4
Leishmanicidal potentials of Gossypium hirsutum extract and its fractions on Leishmania major in a murine model: parasite burden, gene expression, and histopathological profile	4
Gut microbiota plays a significant role in gout	4
Isolation of Clostridioides difficile PCR Ribotype 027 from single-use hospital gown ties	4
Effects of hepatitis B vaccine boosters in different levels of epidemic areas on anti-HBs-negative children after primary vaccination	4
Molecular characterization of carbapenem-resistant Enterobacteriaceae and emergence of tigecycline non-susceptible strains in the Henan province in China: a multicentrer study	4
Lipid A modification-induced colistin-resistant Klebsiella variicola from healthy adults	4