Journal of Experimental Botany

Papers
(The TQCC of Journal of Experimental Botany is 14. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-08-01 to 2026-08-01.)
ArticleCitations
Correction215
NtMYB1 and NtNCED1/2 control abscisic acid biosynthesis and tepal senescence in Chinese narcissus (Narcissus tazetta)146
Investigating plant morphogenesis using 3D digital organs114
Mycorrhizal ecology: in the land of the one-eyed king109
Intrinsic cues guiding changes in division orientation in the Arabidopsis root meristem: a formative experience106
A ribose world: current status and future challenges of plant RNA biology105
Auxins and grass shoot architecture: how the most important hormone makes the most important plants90
Unveiling the virulence mechanism of Leptosphaeria maculans in the Brassica napus interaction: the key role of sirodesmin PL in the induction of cell death87
Complementary water and nutrient utilization of perianth structural units help maintain long floral lifespan inDendrobium87
The configuration of the vacuole is driven by clathrin-mediated trafficking in root cells of Arabidopsis thaliana83
The Phytophthora capsici RxLR effector CRISIS2 triggers cell death via suppressing plasma membrane H+-ATPa82
Dynamic regulation of the chloroplast SUFBC2D complex by SUFB expression and CLP protease in Arabidopsis76
Polycomb proteins RING1A/B promote H2A monoubiquitination to regulate female gametophyte development in Arabidopsis74
The InternationalOryzaMap Alignment Project (IOMAP): the Americas—past achievements and future directions71
Transcriptome-wide association study coupled with eQTL analysis reveals the genetic connection between gene expression and flowering time in Arabidopsis70
Introduction of a terminal electron sink in chloroplasts decreases leaf cell expansion associated with higher proteasome activity and lower endoreduplication69
Salicylic acid suppresses 1O2-mediated susceptibility to Alternaria alternata in Arabidopsis69
Salicaceae endophyte inoculation alters stomatal patterning and improves the intrinsic water-use efficiency of Populus trichocarpa after a water deficit68
Dynamic growth QTL action in diverse light environments: characterization of light regime-specific and stable QTL in Arabidopsis67
Studying root–environment interactions in structured microdevices66
Understanding cell wall enzyme function: from classical approaches to new biotechnology66
Scaling of leaf area with biomass in trees reconsidered: constant metabolically active sapwood volume per unit leaf area with height growth64
Cellular integrity beyond xylem embolism underpins drought tolerance in zoysiagrasses62
WRKY30 negatively regulates lateral root development downstream of the RGF1–RGI1 peptide–receptor module in Arabidopsis60
Plant age-dependent dynamics of annatto pigment (bixin) biosynthesis in Bixa orellana60
Panicle temperature explains contrasting yield responses of rice genotypes to elevated CO2 and increased temperature in T-FACE environments60
Jasmonate/ethylene- and NaWRKY6/3-regulated Alternaria resistance depends on ethylene response factor 1B-like in Nicotiana attenuata60
Ice and air: visualisation of freezing spread and freeze–thaw embolism in young Liriodendron tulipifera leaves60
Photoperiodic control of growth and reproduction in non-flowering plants59
Wheat leaf dark respiration acclimates more strongly at night than in the day when responding to nocturnal warming58
Exogenous RNAs: promising tools for the second green revolution58
Sulfur metabolism-dependent retrograde signalling for oxidative stress acclimation58
Causes and consequences of cytonuclear incompatibility in hybrids of flowering plants57
The protein phosphatase 2A catalytic subunit StPP2Ac2b is involved in the control of potato tuber sprouting and source–sink balance in tubers and sprouts56
Non-Rabl chromosome organization in endoreduplicated nuclei of barley embryo and endosperm tissues56
Conserved and divergent mechanisms by which endoplasmic reticulum stress reprograms lipid metabolism in microalgae55
From biosynthesis to signaling: unveiling the multifaceted roles of phytosulfokine peptide in plants54
Impact of CP12 deletion on inorganic carbon acquisition and Rubisco partitioning in Chlamydomonas reinhardtii54
Biophysical boundaries for dormancy release in sunflower achenes54
Single-Cell Atlases as Meta-Analytic Compasses for Developmental Biology: A Case Study Using the Arabidopsis Root53
Electron transport in cyanobacterial thylakoid membranes: are cyanobacteria simple models for photosynthetic organisms?53
Growth conditions trigger genotype-specific metabolic responses that affect the nutritional quality of kale cultivars53
TCP8 transcription factor negatively regulates Arabidopsis seed germination and antagonizes the function of TCP1452
Biosensors reveal distinct cytosolic pH and redox dynamics across seedlings in response to danger signals and pathogen infection52
The transcriptional co-regulators NBCL1 and NBCL2 redundantly coordinate aerial organ development and root nodule identity in legumes52
Interplay between auxin and abiotic stresses in maize52
How to use CRISPR/Cas9 in plants: from target site selection to DNA repair52
Multilayered regulation of seed oil biosynthesis: transcriptional networks, structural insights, and emerging mechanistic understanding51
High-resolution methylome analysis uncovers stress-responsive genomic hotspots and drought-sensitive transposable element superfamilies in the clonal Lombardy poplar51
Molecular and genetic regulation of petal number variation50
An overview of low-oxygen sensing and flooding responses of tomato49
The PEBP genes FLOWERING LOCUS T and TERMINAL FLOWER 1 modulate seed dormancy and size49
Multi-omic profiles of Sorghum genotypes with contrasting heat tolerance connect pathways related to thermotolerance48
Genetic variation and Rht gene distribution across a century of breeding in North American spring wheat47
Turgor pressure affects transverse stiffness and resonant frequencies of buzz-pollinated poricidal anthers47
Rubisco and its regulation—major advances to improve carbon assimilation and productivity47
Plant oxalate oxidases: key enzymes in redox and stress regulation47
Glandular trichome rupture in tomato plants is an ultra-fast and sensitive defense mechanism against insects47
Genome editing of SlMYB3R3, a cell cycle transcription factor gene of tomato, induces elongated fruit shape47
Stripping off the rice panicle: induced genetic variation awakens the sheathed spikelet for a better yield47
Dissecting ubiquitin-mediated circadian clock regulation in Arabidopsis via high-throughput yeast screening46
Stomatal properties of Arabidopsis cauline and rice flag leaves and their contributions to seed production and grain yield46
Dynamic responses of carbon assimilation and stomatal conductance in the future climate46
Correction to: Growth–defence trade-off in rice: fast-growing and acquisitive genotypes have lower expression of genes involved in immunity46
Genetic modification of PIN genes induces causal mechanisms of stay-green drought adaptation phenotype46
Nodule-specific cystatin GmCYS18 promotes soybean nodulation by inhibiting expression of the cysteine protease gene GmCYP1746
Spatiotemporal dynamics of anionic phospholipids orchestrate lateral root initiation and morphogenesis in Arabidopsis thaliana45
Methylthioadenosine-driven rewiring of sulfur assimilation lowers the methyl index and fertility in Arabidopsis45
Mechanisms of the formation of acquired drought tolerance in wheat: insights from combining high-throughput phenotyping and genome-wide association study45
Elevated methionine in plants: the effect on development, stress responses, epigenetics and nutritional biofortification45
Structural coloration and epicuticular wax properties of the distinctive glaucous leaves of Encephalartos horridus44
The α form of Rubisco activase supports photosynthesis during heat stress in the absence of the β form in Setaria viridis43
The transcription factor GhTCP7 suppresses petal expansion by interacting with the WIP-type zinc finger protein GhWIP2 in Gerbera hybrida42
Single-cell and spatial transcriptomics in plants: from cell states to inter-tissue coordination41
Homoeologous exchange enables rapid evolution of tolerance to salinity and hyper-osmotic stresses in a synthetic allotetraploid wheat41
Overcoming drought: life traits driving tree strategies to confront drought stress41
The RNA recognition motif (RRM) of the Arabidopsis RS2Z32 and RS2Z33 splicing factors coordinates protein–protein and protein–RNA interactions, and contributes to their nucleocytoplasmic dynamics41
Tomato POLLEN DEFICIENT 2 encodes a G-type lectin receptor kinase required for viable pollen grain formation40
Hyperspectral imaging reveals small-scale water gradients in apple leaves due to minimal cuticle perforation by Venturia inaequalis conidiophores40
The conformation of glutenin polymers in wheat grain: some genetic and environmental factors associated with this important characteristic40
OsRH52A, a DEAD-box protein, regulates functional megaspore specification and is required for embryo sac development in rice40
Pollen counting made easy: mobile pollen counter provides real-time results in the field40
Gene regulatory networks underlying sulfate deficiency responses in plants40
N-terminal domain swapping contributes to phosphatidylcholine:diacylglycerol cholinephosphotransferase function40
Knocking down a DNA demethylase gene affects potato plant defense against a specialist insect herbivore39
Characterization of biochemistry and anatomy for underwater carbon uptake in leaves of the amphibious plant Hygrophila difformis39
Reducing PHYTOENE SYNTHASE activity fine-tunes the abundance of a cis-carotene-derived signal that regulates the PIF3/HY5 module and plastid biogenesis38
Impact of severe water stress on drought resistance mechanisms and hydraulic vulnerability segmentation in grapevine: the role of rootstock38
Shedding light on iron nutrition: exploring intersections of transcription factor cascades in light and iron deficiency signaling38
An effector of ‘Candidatus Liberibacter asiaticus’ manipulates autophagy to promote bacterial infection38
Galactinol synthase 2 influences the metabolism of chlorophyll, carotenoids, and ethylene in tomato fruits38
Biolistics-mediated transformation of hornworts and its application to study pyrenoid protein localization38
Comprehensive Lipidomic and Transcriptomic Analysis of Arabidopsis upon Verticillium dahliae Infection38
Photosensory adaptation mechanisms in hypocotyl phototropism: how plants recognize the direction of a light source38
The potential of considering photosynthesis parameters in crop yield breeding by genomic prediction38
Belowground carbon allocation, root trait plasticity, and productivity during drought and warming in a pasture grass38
Molecular evolution and interaction of 14-3-3 proteins with H+-ATPases in plant abiotic stresses38
Contrasting photosynthetic, stomatal, and mesophyll mechanisms drive common reductions in leaf water-use efficiency under blue light37
Recent advances in the multifaceted functions of Cys2/His2-type zinc finger proteins in plant growth, development, and stress responses37
PagWOX11/12a positively regulates the PagSAUR36 gene that enhances adventitious root development in poplar37
DNA methylation and gene transcription act cooperatively in driving the adaptation of a marine diatom to global change37
Evolution of drought and frost responses in cool season grasses (Pooideae): was drought tolerance a precursor to frost tolerance?37
Traits linked to natural variation of sulfur content in Arabidopsis thaliana37
Delayed development of basal spikelets in wheat explains their increased floret abortion and rudimentary nature37
Primary multistep phosphorelay activation comprises both cytokinin and abiotic stress responses: insights from comparative analysis of Brassica type-A response regulators37
Stress granules as central players in the plant stress response37
WOX1 controls leaf serration development via temporally restricting BRASSINAZOLE RESISTANT 1 and CUP SHAPED COTYLEDON 3 expression in Arabidopsis37
Differential sensitivities of photosynthetic processes and carbon loss mechanisms govern N-induced variation in net carbon assimilation rate for field-grown cotton37
Salinity tolerance in wheat: rethinking the targets36
Technological advances in imaging and modelling of leaf structural traits: a review of heat stress in wheat36
Cytokinin signaling promotes root hair growth by directly regulating RSL4 expression36
H3K27 demethylase SsJMJ4 negatively regulates drought-stress responses in sugarcane36
Natural variation in DXR expression is associated with apical hook bending under NaCl stress in Arabidopsis thaliana36
The dawn of stomatal control by the hormone of darkness36
A negative feedback regulatory module comprising R3-MYB repressor MYBL2 and R2R3-MYB activator PAP1 fine-tunes high light-induced anthocyanin biosynthesis in Arabidopsis36
Diel carbon buffering by floridoside enables source–sink resilience in the intertidal red alga Pyropia haitanensis36
Adjustments of plant primary metabolism in the face of climate change36
Genetic and genomic resources for accelerating marker-assisted ideotype breeding in pigeonpea ( Cajanus cajan L. Millsp.)35
Multiscale strategies to enhance plant resilience under climate change35
Acylamino acid-releasing enzyme, a bifunctional protease with a potential role in aging35
Comparative morphoanatomy and transcriptomic analyses reveal key factors controlling floral trichome development in Aristolochia (Aristolochiaceae)35
Red Rubiscos and opportunities for engineering green plants35
To tolerate drought or resist aphids? A new challenge to plant science is on the horizon35
Haploid induction by nanobody-targeted ubiquitin-proteasome-based degradation of EYFP-tagged CENH3 in Arabidopsis thaliana35
Seed germination variability: why do genetically identical seeds not germinate at the same time?35
Inhibition of RNA degradation integrates the metabolic signals induced by osmotic stress into the Arabidopsis circadian system35
CNGC15 and DMI1 ion channel gating in nuclear calcium signaling: opening new questions and closing controversies34
Receptor kinase LecRK-I.9 regulates cell wall remodelling during lateral root formation in Arabidopsis34
Aphid infestation induces plant sex-specific changes in floral chemistry and pollinator behaviour in Silene latifolia34
Barley powdery mildew effector CSEP0162 interacts with the endosome membrane-binding domain of barley MON134
3',5'-cAMP in plants: an integrated view of homeostasis, effectors, and physiological functions34
The dynamic duo: how DNA methylation and gene transcription help diatoms thrive in modern oceans34
Ubiquitin negatively regulates ABA responses by inhibiting SnRK2.2 and SnRK2.3 kinase activity in Arabidopsis34
GABA transport: beyond stress? A closer look at AtGAT234
Correction to: Auxin transport at the endoplasmic reticulum: roles and structural similarity of PIN-FORMED and PIN-LIKES34
Genetic diversity of leaf photosynthesis under fluctuating light conditions among temperate japonica rice varieties34
THO5 subunit of the Arabidopsis thaliana TREX complex: role in mRNA export and heat tolerance33
Time-resolved transcriptomics of single Vitis vinifera fruits: membrane transporters as switches of the double sigmoidal growth33
Functional characterization of bicarbonate transporters from the cyanobacterial SbtA2 family and subsequent expression in tobacco33
Hyperspectral imaging for chloroplast movement detection33
Nitrogen status defines grapevine metabolic response to sulfur deficiency33
TPR domain-containing co-chaperones of HSP70 and HSP90 in plants33
Plant proteases: guardians of proteome integrity and regulators of protein function33
An ANTHRANILATE SYNTHASE interacts with ABA and is required for ABA-dependent stomatal closing33
Development of pollinated and unpollinated ovules in Ginkgo biloba: unravelling the role of pollen in ovule tissue maturation33
A novel salivary effector, BtE3, is essential for whitefly performance on host plants33
Enhancing the resilience of plant systems to climate change33
Fine mapping of the grain chalkiness quantitative trait locus qCGP6 reveals the involvement of Wx in grain chalkiness formation32
Leaf width expansion and biomass allocation, rather than photosynthetic rate, drive early vigor in newly developed rice lines32
Integrative analysis of CAM photosynthesis reveals its impact on primary metabolism in Yucca32
The Arabidopsis eATP receptor DORN1 and CNGC19 calcium channel act in tandem to regulate plant defense upon Spodoptera litura herbivory32
Jasmonate signaling controls negative and positive effectors of salt stress tolerance in rice32
Circadian and diurnal regulation of plant lipid metabolism32
The impact of growth at elevated [CO2] on stomatal anatomy and behavior differs between wheat species and cultivars32
Flowering Newsletter 202432
Flower jasmonates control fertility but are largely disconnected from defense metabolites in reproductive tissues of rice31
Deciphering underexplored rhizosphere processes: root acquisition of citric acid and its metabolic journey in tomato31
High water use efficiency due to maintenance of photosynthetic capacity in sorghum under water stress31
Nitrate reductase-mediated nitric oxide synthesis in shaping stress resilience in plants31
Waxy ( Wx ) gene, which encodes a granule-bound starch synthase I (GBSSI), promotes rapid seed germination and embryo growth i31
Combination of in vivo proximity labeling and co-immunoprecipitation identifies the host target network of a tumor-inducing effector in the fungal maize pathogen Ustilago maydis31
Tracing nutrient and cadmium accumulation in wheat from vegetative growth to grain filling: source dependencies and grain transcriptional programs31
Cascading functional water balance traits enhance wheat grain yield under terminal drought31
Autophagy: a key player in the recovery of plants from heat stress31
The maize B chromosome shapes the transcriptome throughout the entire plant life cycle31
Regulation of climacteric fruit ripening in melon: recent advances and future challenges31
The role of reactive oxygen, nitrogen, and sulfur species in the integration of (a)biotic stress signals in legumes31
Physiological and molecular mechanisms associated with potato tuber dormancy30
Advances in cis-element- and natural variation-mediated transcriptional regulation and applications in gene editing of major crops30
Comparative transcriptomics reveals epigenetic and transcriptional regulatory genes associated with drought stress memory in winter wheat30
Hydrogen sulfide and protein persulfidation in plant stress signaling30
Root hairs: an underexplored target for sustainable cereal crop production30
New molecular components that regulate the transcriptional hub in root hairs: coupling environmental signals with endogenous hormones to coordinate growth30
Evidence for dual targeting control of Arabidopsis 6-phosphogluconate dehydrogenase isoforms by N-terminal phosphorylation30
Berry shrivel in grapevine: a review considering multiple approaches30
TOR represses stress responses through global regulation of H3K27 trimethylation in plants30
Oxidative stress: a new player in the regulation of AGO1 homeostasis?29
Editor’s Note to: Barley endosomal MONENSIN SENSITIVITY1 is a target of the powdery mildew effector CSEP0162 and plays a role in plant immunity29
Correction to: The maize aquaporin ZmPIP1;6 enhances stomatal opening and CO2- and ABA-induced stomatal closure29
Non-specific phospholipase Cs and their potential for crop improvement29
Lipid droplet proteome plasticity in plant evolution, growth and development, and response to stress29
Estimating intra-seasonal photosynthetic discrimination and water use efficiency using δ13C of leaf sucrose in Scots pine29
Single-nuclei sequencing of Moricandia arvensis reveals bundle sheath cell function in the photorespiratory shuttle of C3-C4 intermediate Brassicaceae29
Regulatory structural variations upstream of a NAC transcription factor control fruit maturity timing in peach29
Plant–plant interactions in wheat mixtures modulate mean and variance of susceptibility to Septoria tritici blotch29
Identification of causal agent of gray blight disease in Camellia sinensis and screening of resistance cultivars29
Correction to: Scaling of leaf area with biomass in trees reconsidered: constant metabolically active sapwood volume per unit leaf area with height growth29
Ubiquitination from the perspective of plant pathogens29
A model estimating the level of floral transition in olive trees exposed to warm periods during winter29
ZmMPK6, a mitogen-activated protein kinase, regulates maize kernel weight29
Fifty years of sperm cell isolations: from structural to omic studies28
Internal micro-CT image enhancement method for rice seedling stems based on a pre-enhancement network and diffusion model28
Cell wall fucosylation in Arabidopsis influences control of leaf water loss and alters stomatal development and mechanical properties28
Towards holistic phenotype prediction beyond genotypic data28
Photoperiod sensitivity of Ppd-H1 and ppd-H1 isogenic lines of a spring barley cultivar: exploring extreme photoperiods28
Terpene synthase genes conferring aphid resistance via enhanced d -limonene and myrcene biosynthesis in purslane ( Portulaca olera28
The early hormone signaling network underlying wound-induced de novo root regeneration28
A novel molecular switch in plant growth: how adenosine kinase activity modulates plant development and growth pathways28
More than meets the eye: knowns and unknowns of the trafficking of small secreted proteins in Arabidopsis28
Grafting reveals organ-autonomous and feedback roles of root phloem development in source–sink dynamics28
A phospho-dawn of protein modification anticipates light onset in the picoeukaryoteOstreococcus tauri28
What's in a name? The case for standardized nomenclature for mutualistic Mucoromycotina ‘fine root endophytes’27
Experimental validation of the mechanism of stomatal development diversification27
Deciphering the genetic architecture and regulatory mechanism underlying the accumulation of seed storage proteins in wheat27
Crosstalks between plant proteostasis and chromatin remodeling machineries27
Genome shock in a synthetic allotetraploid wheat invokes subgenome-partitioned gene regulation, meiotic instability, and karyotype variation27
Integrative genome and transcriptome analysis identifies smoke-responsive glycosyltransferases in grapevine berries27
The potential of silicon in crop protection against phloem feeding and chewing insect pests: a review27
Is now the time for a Rubiscuit or Ruburger? Increased interest in Rubisco as a food protein27
New insights into microbial manipulation of the plant spliceosome27
Quantifying the relative importance of disease-suppressive mechanisms in species mixtures: a case study of late blight in strip-intercropped potato27
Keep in touch: the soil–root hydraulic continuum and its role in drought resistance in crops27
Comparative analysis of storage compound metabolism in the embryo and endosperm of Cakile maritima seeds26
The function, evolution, and future of carboxysomes26
Differences in foliar phosphorus fractions, rather than in cell-specific phosphorus allocation, underlie contrasting photosynthetic phosphorus use efficiency among chickpea genotypes26
PHO1: linking phosphate nutrition translocation and floral signalling in plants26
Multi-parental cross design-based QTL mapping approach elucidates fruit firmness and softening genetic control in European pears ( Pyrus communis )26
Redox-mediated regulation of ABSCISIC ACID-INSENSITIVE 5 affects seed germination and seedling development in Arabidopsis26
When two negatives make a positive: the favorable impact of the combination of abiotic stress and pathogen infection on plants26
Low sucrose availability reduces basal spikelet fertility by inducing abscisic acid and jasmonic acid synthesis in wheat26
Potential of rice tillering for sustainable food production26
The apple transcription factor MdZF-HD11 regulates fruit softening by promoting Mdβ-GAL18 expression26
Metabolic link between auxin production and specialized metabolites in Sorghum bicolor26
Endosperm cell death: roles and regulation in angiosperms26
Receptor-like kinases OsRLK902-1 and OsRLK902-2 form immune complexes with OsRLCK185 to regulate rice blast resistance26
Resolving spatially distinct phytohormone response zones in Arabidopsis thaliana roots colonized by Fusarium oxysporum26
Volatile defense signaling: molecular basis of herbivory-induced terpene biosynthesis and emission in purple willow leaves25
Redox regulation, thioredoxins, and glutaredoxins in retrograde signalling and gene transcription25
Jujube development and ripening process provides a two-stage coloration model: ZjHY5 -mediated flavonoid biosynthesis precedes senescence-driven phenolic25
Non-coding and epigenetic mechanisms in the regulation of seed germination in Arabidopsis thaliana25
The zinc finger transcription factor MtSTOP1 modulates aluminum resistance and low pH tolerance in Medicago truncatula25
Regulation of cell-to-cell trafficking by viral movement proteins25
Rational gene stacking for seed-specific carbon partitioning to simultaneously enhance lipid and protein contents in Arabidopsis25
Rubisco, the imperfect winner: it’s all about the base25
The secreted immune response peptide 1 functions as a phytocytokine in rice immunity25
Deciphering molecular events behind Systemin-induced resistance to Botrytis cinerea in tomato plants25
The confluence of TOR signalling and plant growth regulators in development and stress responses25
Molecular advances in bud dormancy in trees25
A reciprocal feedback loop between General Regulatory Factor 9 and SNF1-related protein kinase 1 integrates shade signaling with autophagy-mediated flower bud abortion in lotus25
Nitrogen demand and availability: relative roles in driving C3 plant responses to elevated CO224
Steroidal glycoalkaloids contribute to anthracnose resistance in Solanum lycopersicum24
Carbon allocation in banana: revisiting assumptions and proposing research directions24
Arabidopsis G-protein β subunit AGB1 represses abscisic acid signaling via attenuation of the MPK3–VIP1 phosphorylation cascade24
Lipid transfer protein VAS inhibits the hypersensitive response via reactive oxygen species signaling in Nicotiana benthamiana24
A spontaneous mutation in a key C4 pathway gene significantly alters leaf δ13C, uncoupling its relationship with water use efficiency and photosynthetic performance in Zea mays<24
Iron retention coupled with trade-offs in localized symbiotic effects confers tolerance to combined iron deficiency and drought in soybean24
Hyperspectral mapping of the response of grapevine cultivars to Plasmopara viticola infection at the tissue scale24
Secure but flexible: temporary adhesion in mistletoe seedlings24
Correction to: Hyperspectral imaging for chloroplast movement detection24
Nocturnal foliar water uptake: an unexplored process in crops?24
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