Journal of Experimental Botany

Papers
(The TQCC of Journal of Experimental Botany is 15. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2022-01-01 to 2026-01-01.)
ArticleCitations
Correction218
Investigating plant morphogenesis using 3D digital organs135
Mycorrhizal ecology: in the land of the one-eyed king128
Non-Rabl chromosome organization in endoreduplicated nuclei of barley embryo and endosperm tissues116
Polycomb proteins RING1A/B promote H2A monoubiquitination to regulate female gametophyte development in Arabidopsis116
The configuration of the vacuole is driven by clathrin-mediated trafficking in root cells of Arabidopsis thaliana92
Plant oxalate oxidases: key enzymes in redox and stress regulation90
Photoperiodic control of growth and reproduction in non-flowering plants87
High-resolution methylome analysis uncovers stress-responsive genomic hotspots and drought-sensitive transposable element superfamilies in the clonal Lombardy poplar86
Studying root–environment interactions in structured microdevices85
Jasmonate/ethylene- and NaWRKY6/3-regulated Alternaria resistance depends on ethylene response factor 1B-like in Nicotiana attenuata84
Growth conditions trigger genotype-specific metabolic responses that affect the nutritional quality of kale cultivars83
Intrinsic cues guiding changes in division orientation in the Arabidopsis root meristem: a formative experience78
The PEBP genes FLOWERING LOCUS T and TERMINAL FLOWER 1 modulate seed dormancy and size73
Plant age-dependent dynamics of annatto pigment (bixin) biosynthesis in Bixa orellana72
A ribose world: current status and future challenges of plant RNA biology70
Exogenous RNAs: promising tools for the second green revolution66
Panicle temperature explains contrasting yield responses of rice genotypes to elevated CO2 and increased temperature in T-FACE environments66
Altered collective mitochondrial dynamics in the Arabidopsis msh1 mutant compromising organelle DNA maintenance64
Multi-omic profiles of Sorghum genotypes with contrasting heat tolerance connect pathways related to thermotolerance64
Complementary water and nutrient utilization of perianth structural units help maintain long floral lifespan inDendrobium64
Introduction of a terminal electron sink in chloroplasts decreases leaf cell expansion associated with higher proteasome activity and lower endoreduplication63
The InternationalOryzaMap Alignment Project (IOMAP): the Americas—past achievements and future directions61
Dynamic growth QTL action in diverse light environments: characterization of light regime-specific and stable QTL in Arabidopsis61
NtMYB1 and NtNCED1/2 control abscisic acid biosynthesis and tepal senescence in Chinese narcissus (Narcissus tazetta)61
Ice and air: visualisation of freezing spread and freeze–thaw embolism in young Liriodendron tulipifera leaves61
From biosynthesis to signaling: unveiling the multifaceted roles of phytosulfokine peptide in plants60
How to use CRISPR/Cas9 in plants: from target site selection to DNA repair59
TCP8 transcription factor negatively regulates Arabidopsis seed germination and antagonizes the function of TCP1458
The Phytophthora capsici RxLR effector CRISIS2 triggers cell death via suppressing plasma membrane H+-ATPa58
Scaling of leaf area with biomass in trees reconsidered: constant metabolically active sapwood volume per unit leaf area with height growth58
The protein phosphatase 2A catalytic subunit StPP2Ac2b is involved in the control of potato tuber sprouting and source–sink balance in tubers and sprouts57
Biophysical boundaries for dormancy release in sunflower achenes56
Multilayered regulation of seed oil biosynthesis: transcriptional networks, structural insights, and emerging mechanistic understanding56
Molecular and genetic regulation of petal number variation54
Unveiling the virulence mechanism of Leptosphaeria maculans in the Brassica napus interaction: the key role of sirodesmin PL in the induction of cell death53
Salicaceae endophyte inoculation alters stomatal patterning and improves the intrinsic water-use efficiency of Populus trichocarpa after a water deficit53
Electron transport in cyanobacterial thylakoid membranes: are cyanobacteria simple models for photosynthetic organisms?52
Transcriptome-wide association study coupled with eQTL analysis reveals the genetic connection between gene expression and flowering time in Arabidopsis52
Genome editing of SlMYB3R3, a cell cycle transcription factor gene of tomato, induces elongated fruit shape52
Cytokinin oxidase/dehydrogenase family genes exhibit functional divergence and overlap in rice growth and development, especially in control of tillering51
Melatonin as a regulator of plant ionic homeostasis: implications for abiotic stress tolerance51
An overview of low-oxygen sensing and flooding responses of tomato49
Glandular trichome rupture in tomato plants is an ultra-fast and sensitive defense mechanism against insects49
Dynamic regulation of the chloroplast SUFBC2D complex by SUFB and CLP protease in Arabidopsis48
Salicylic acid suppresses 1O2-mediated susceptibility to Alternaria alternata in Arabidopsis48
Interplay between auxin and abiotic stresses in maize47
Auxins and grass shoot architecture: how the most important hormone makes the most important plants47
The transcriptional co-regulators NBCL1 and NBCL2 redundantly coordinate aerial organ development and root nodule identity in legumes47
Wheat photosystem II heat tolerance responds dynamically to short- and long-term warming47
Actin isovariant ACT7 controls root meristem development in Arabidopsis through modulating auxin and ethylene responses47
Rubisco and its regulation—major advances to improve carbon assimilation and productivity47
Stripping off the rice panicle: induced genetic variation awakens the sheathed spikelet for a better yield46
Traits linked to natural variation of sulfur content in Arabidopsis thaliana46
Genetic and multi-omics analyses reveal BnaA07.PAP2 In-184-317 as the key gene conferring anthocyanin-based color in Brassica napus flowers45
Correction to: Growth–defence trade-off in rice: fast-growing and acquisitive genotypes have lower expression of genes involved in immunity45
Salinity tolerance in wheat: rethinking the targets44
Phytomelatonin: an unexpected molecule with amazing performances in plants44
Gene regulatory networks underlying sulfate deficiency responses in plants43
Genetic modification of PIN genes induces causal mechanisms of stay-green drought adaptation phenotype43
Shedding light on iron nutrition: exploring intersections of transcription factor cascades in light and iron deficiency signaling43
Molecular evolution and interaction of 14-3-3 proteins with H+-ATPases in plant abiotic stresses43
Technological advances in imaging and modelling of leaf structural traits: a review of heat stress in wheat43
Red Rubiscos and opportunities for engineering green plants43
The conformation of glutenin polymers in wheat grain: some genetic and environmental factors associated with this important characteristic42
A stress-associated protein OsSAP8 modulates gibberellic acid biosynthesis by reducing the promotive effect of transcription factor OsbZIP58 on OsKO242
An effector of ‘Candidatus Liberibacter asiaticus’ manipulates autophagy to promote bacterial infection42
Differential sensitivities of photosynthetic processes and carbon loss mechanisms govern N-induced variation in net carbon assimilation rate for field-grown cotton42
Impact of severe water stress on drought resistance mechanisms and hydraulic vulnerability segmentation in grapevine: the role of rootstock42
H3K27 demethylase SsJMJ4 negatively regulates drought-stress responses in sugarcane42
The membrane associated NAC transcription factors ANAC060 and ANAC040 are functionally redundant in the inhibition of seed dormancy inArabidopsis thaliana42
Hyperspectral imaging reveals small-scale water gradients in apple leaves due to minimal cuticle perforation by Venturia inaequalis conidiophores41
Spatiotemporal Dynamics of Anionic Phospholipids Orchestrate Lateral Root Initiation and Morphogenesis in Arabidopsis thaliana41
Structural coloration and epicuticular wax properties of the distinctive glaucous leaves of Encephalartos horridus41
Phenotypic variation in photosynthetic traits in wheat grown under field versus glasshouse conditions41
Overcoming drought: life traits driving tree strategies to confront drought stress41
DNA methylation and gene transcription act cooperatively in driving the adaptation of a marine diatom to global change41
Melatonin enhances stress tolerance in pigeon pea by promoting flavonoid enrichment, particularly luteolin in response to salt stress41
Mechanisms of the formation of acquired drought tolerance in wheat: insights from combining high-throughput phenotyping and genome-wide association study41
Stomatal properties of Arabidopsis cauline and rice flag leaves and their contributions to seed production and grain yield40
The RNA recognition motif (RRM) of the Arabidopsis RS2Z32 and RS2Z33 splicing factors coordinates protein–protein and protein–RNA interactions, and contributes to their nucleocytoplasmic dynamics40
OsRH52A, a DEAD-box protein, regulates functional megaspore specification and is required for embryo sac development in rice40
Homoeologous exchange enables rapid evolution of tolerance to salinity and hyper-osmotic stresses in a synthetic allotetraploid wheat40
Cytokinin signaling promotes root hair growth by directly regulating RSL4 expression40
Contrasting photosynthetic, stomatal, and mesophyll mechanisms drive common reductions in leaf water-use efficiency under blue light40
Biolistics-mediated transformation of hornworts and its application to study pyrenoid protein localization40
Dissecting ubiquitin-mediated circadian clock regulation in Arabidopsis via high-throughput yeast screens39
The transcription factor GhTCP7 suppresses petal expansion by interacting with the WIP-type zinc finger protein GhWIP2 in Gerbera hybrida39
WOX1 controls leaf serration development via temporally restricting BRASSINAZOLE RESISTANT 1 and CUP SHAPED COTYLEDON 3 expression in Arabidopsis39
The α form of Rubisco activase supports photosynthesis during heat stress in the absence of the β form in Setaria viridis39
Characterization of biochemistry and anatomy for underwater carbon uptake in leaves of the amphibious plant Hygrophila difformis39
Tomato POLLEN DEFICIENT 2 encodes a G-type lectin receptor kinase required for viable pollen grain formation39
Dynamic responses of carbon assimilation and stomatal conductance in the future climate38
Primary multistep phosphorelay activation comprises both cytokinin and abiotic stress responses: insights from comparative analysis of Brassica type-A response regulators38
Turgor pressure affects transverse stiffness and resonant frequencies of buzz-pollinated poricidal anthers38
Reducing PHYTOENE SYNTHASE activity fine-tunes the abundance of a cis-carotene-derived signal that regulates the PIF3/HY5 module and plastid biogenesis38
Regulation of lignin biosynthesis by an atypical bHLH protein CmHLB inChrysanthemum38
The role of root hairs in water uptake: recent advances and future perspectives38
Photosensory adaptation mechanisms in hypocotyl phototropism: how plants recognize the direction of a light source37
Belowground carbon allocation, root trait plasticity, and productivity during drought and warming in a pasture grass37
Delayed development of basal spikelets in wheat explains their increased floret abortion and rudimentary nature37
A quantitative analysis of temperature-dependent seasonal dormancy cycling in buried Arabidopsis thaliana seeds can predict seedling emergence in a global warming scenario37
A negative feedback regulatory module comprising R3-MYB repressor MYBL2 and R2R3-MYB activator PAP1 fine-tunes high light-induced anthocyanin biosynthesis in Arabidopsis36
Adjustments of plant primary metabolism in the face of climate change36
PagWOX11/12a positively regulates the PagSAUR36 gene that enhances adventitious root development in poplar36
Knocking down a DNA demethylase gene affects potato plant defense against a specialist insect herbivore36
Galactinol synthase 2 influences the metabolism of chlorophyll, carotenoids, and ethylene in tomato fruits36
Evolution of drought and frost responses in cool season grasses (Pooideae): was drought tolerance a precursor to frost tolerance?36
Recent advances in the multifaceted functions of Cys2/His2-type zinc finger proteins in plant growth, development, and stress responses36
The small subunit of Rubisco and its potential as an engineering target35
Fine mapping of the grain chalkiness quantitative trait locus qCGP6 reveals the involvement of Wx in grain chalkiness formation35
Firming up your tomato: a natural promoter variation in a MADS-box gene is causing all-flesh tomatoes35
The Arabidopsis eATP receptor DORN1 and CNGC19 calcium channel act in tandem to regulate plant defense upon Spodoptera litura herbivory34
Flowering Newsletter 202434
Evidence for dual targeting control of Arabidopsis 6-phosphogluconate dehydrogenase isoforms by N-terminal phosphorylation34
C4 trees have a broader niche than their close C3 relatives34
The role of reactive oxygen, nitrogen, and sulfur species in the integration of (a)biotic stress signals in legumes34
Cascading functional water balance traits enhance wheat grain yield under terminal drought34
Plant proteases: guardians of proteome integrity and regulators of protein function34
Flower jasmonates control fertility but are largely disconnected from defense metabolites in reproductive tissues of rice34
The maize B chromosome shapes the transcriptome throughout the entire plant life cycle33
Correction to: Auxin transport at the endoplasmic reticulum: roles and structural similarity of PIN-FORMED and PIN-LIKES33
GABA transport: beyond stress? A closer look at AtGAT233
Ubiquitin negatively regulates ABA responses by inhibiting SnRK2.2 and SnRK2.3 kinase activity in Arabidopsis32
Precipitation and local environment shape the geographic variation of seed size across natural populations of sand rice (Agriophyllum squarrosum)32
The dynamic duo: how DNA methylation and gene transcription help diatoms thrive in modern oceans32
New molecular components that regulate the transcriptional hub in root hairs: coupling environmental signals with endogenous hormones to coordinate growth32
Receptor kinase LecRK-I.9 regulates cell wall remodelling during lateral root formation in Arabidopsis32
Development of pollinated and unpollinated ovules in Ginkgo biloba: unravelling the role of pollen in ovule tissue maturation32
Genetic diversity of leaf photosynthesis under fluctuating light conditions among temperate japonica rice varieties31
Regulation of climacteric fruit ripening in melon: recent advances and future challenges31
Volatile compounds—the language of all kingdoms?31
Nitrate reductase-mediated nitric oxide synthesis in shaping stress resilience in plants31
The stickers and spacers of Rubiscondensation: assembling the centrepiece of biophysical CO2-concentrating mechanisms31
Berry shrivel in grapevine: a review considering multiple approaches31
Jasmonate signaling controls negative and positive effectors of salt stress tolerance in rice31
Hyperspectral imaging for chloroplast movement detection31
Aphid infestation induces plant-sex-specific changes in floral chemistry and pollinator behaviour in Silene latifolia31
Hydrogen sulfide and protein persulfidation in plant stress signaling31
Anabolism and signaling pathways of phytomelatonin31
High water use efficiency due to maintenance of photosynthetic capacity in sorghum under water stress31
Drought stress increases the expression of barley defence genes with negative consequences for infesting cereal aphids30
CNGC15 and DMI1 ion channel gating in nuclear calcium signaling: opening new questions and closing controversies30
Physiological and molecular mechanisms associated with potato tuber dormancy30
To tolerate drought or resist aphids? A new challenge to plant science is on the horizon30
Inhibition of RNA degradation integrates the metabolic signals induced by osmotic stress into the Arabidopsis circadian system30
Genetic and genomic resources for accelerating marker-assisted ideotype breeding in pigeonpea ( Cajanus cajan L. Millsp.)30
Seedling and field assessment of wheat (Triticum aestivum L.) dwarfing genes and their influence on root traits in multiple genetic backgrounds30
Barley powdery mildew effector CSEP0162 interacts with the endosome membrane-binding domain of barley MON130
Combination of in vivo proximity labeling and co-immunoprecipitation identifies the host target network of a tumor-inducing effector in the fungal maize pathogen Ustilago maydis30
Root hairs: an underexplored target for sustainable cereal crop production29
Advances in cis-element- and natural variation-mediated transcriptional regulation and applications in gene editing of major crops29
Autophagy: a key player in the recovery of plants from heat stress29
3',5'-cAMP in plants: an integrated view of homeostasis, effectors, and physiological functions29
Time-resolved transcriptomics of single Vitis vinifera fruits: membrane transporters as switches of the double sigmoidal growth29
The impact of growth at elevated [CO2] on stomatal anatomy and behavior differs between wheat species and cultivars29
Seed germination variability: why do genetically identical seeds not germinate at the same time?29
Haploid induction by nanobody-targeted ubiquitin-proteasome-based degradation of EYFP-tagged CENH3 in Arabidopsis thaliana29
Enhancing the resilience of plant systems to climate change29
TOR represses stress responses through global regulation of H3K27 trimethylation in plants29
Acylamino acid-releasing enzyme, a bifunctional protease with a potential role in aging29
Comparative morphoanatomy and transcriptomic analyses reveal key factors controlling floral trichome development in Aristolochia (Aristolochiaceae)29
Correction to: The maize aquaporin ZmPIP1;6 enhances stomatal opening and CO2- and ABA-induced stomatal closure28
Correction to: Scaling of leaf area with biomass in trees reconsidered: constant metabolically active sapwood volume per unit leaf area with height growth28
Fifty years of sperm cell isolations: from structural to omic studies28
Plant–plant interactions in wheat mixtures modulate mean and variance of susceptibility to Septoria tritici blotch28
PHO1: linking phosphate nutrition translocation and floral signalling in plants28
A novel salivary effector, BtE3, is essential for whitefly performance on host plants28
More than meets the eye: knowns and unknowns of the trafficking of small secreted proteins in Arabidopsis28
The potential of silicon in crop protection against phloem feeding and chewing insect pests: a review28
Photoperiod sensitivity of Ppd-H1 and ppd-H1 isogenic lines of a spring barley cultivar: exploring extreme photoperiods28
Identification of causal agent Gray Blight Disease in Camellia sinensis and screening of resistance cultivars28
Deciphering the genetic architecture and regulatory mechanism underlying the accumulation of seed storage proteins in wheat28
What's in a name? The case for standardized nomenclature for mutualistic Mucoromycotina ‘fine root endophytes’28
The Confluence of TOR signaling and Plant Growth Regulators in Development and Stress Responses28
The zinc finger transcription factor MtSTOP1 modulates aluminum resistance and low pH tolerance in Medicago truncatula28
N-dependent dynamics of root growth and nitrate and ammonium uptake are altered by the bacterium Herbaspirillum seropedicae in the cereal model Brachypodium distachyon27
Ubiquitination from the perspective of plant pathogens27
Cell wall fucosylation in Arabidopsis influences control of leaf water loss and alters stomatal development and mechanical properties27
A model estimating the level of floral transition in olive trees exposed to warm periods during winter27
Rubisco, the imperfect winner: it’s all about the base27
Regulation of cell-to-cell trafficking by viral movement proteins27
The function, evolution, and future of carboxysomes27
Editor’s Note to: Barley endosomal MONENSIN SENSITIVITY1 is a target of the powdery mildew effector CSEP0162 and plays a role in plant immunity27
When two negatives make a positive: the favorable impact of the combination of abiotic stress and pathogen infection on plants27
The secreted immune response peptide 1 functions as a phytocytokine in rice immunity26
Guard-cell-targeted overexpression of ArabidopsisHexokinase 1can improve water use efficiency in field-grown tobacco plants26
Experimental validation of the mechanism of stomatal development diversification26
A phospho-dawn of protein modification anticipates light onset in the picoeukaryoteOstreococcus tauri26
ZmMPK6, a mitogen-activated protein kinase, regulates maize kernel weight26
Presence and future of plant phenotyping approaches in biostimulant research and development26
A novel molecular switch in plant growth: how adenosine kinase activity modulates plant development and growth pathways26
Estimating intra-seasonal photosynthetic discrimination and water use efficiency using δ13C of leaf sucrose in Scots pine26
Genome shock in a synthetic allotetraploid wheat invokes subgenome-partitioned gene regulation, meiotic instability, and karyotype variation26
Integrative genome and transcriptome analysis identifies smoke-responsive glycosyltransferases in grapevine berries26
Receptor-like kinases OsRLK902-1 and OsRLK902-2 form immune complexes with OsRLCK185 to regulate rice blast resistance26
TPS Genes Conferring Aphid Resistance via Enhanced d -Limonene and Myrcene Biosynthesis in Purslane ( Portulaca oleracea 26
Multi-parental cross design-based QTL mapping approach elucidates fruit firmness and softening genetic control in European pears ( Pyrus communis )26
Non-specific phospholipase Cs and their potential for crop improvement26
A simple technology for plastid transformation with fragmented DNA26
Oxidative stress: a new player in the regulation of AGO1 homeostasis?26
Cell wall biology of the mossPhyscomitrium patens26
Internal micro-CT image enhancement method for rice seedling stems based on a pre-enhancement network and diffusion model26
Molecular advances in bud dormancy in trees25
The early hormone signaling network underlying wound-induced de novo root regeneration25
Non-coding and epigenetic mechanisms in the regulation of seed germination in Arabidopsis thaliana25
Low sucrose availability reduces basal spikelet fertility by inducing abscisic acid and jasmonic acid synthesis in wheat25
Differences in foliar phosphorus fractions, rather than in cell-specific phosphorus allocation, underlie contrasting photosynthetic phosphorus use efficiency among chickpea genotypes25
Redox regulation, thioredoxins, and glutaredoxins in retrograde signalling and gene transcription25
Endosperm cell death: roles and regulation in angiosperms25
Potential of rice tillering for sustainable food production25
Keep in touch: the soil–root hydraulic continuum and its role in drought resistance in crops25
Single-nuclei sequencing of Moricandia arvensis reveals bundle sheath cell function in the photorespiratory shuttle of C3-C4 intermediate Brassicaceae25
Resolving spatially distinct phytohormone response zones in Arabidopsis thaliana roots colonized by Fusarium oxysporum25
The apple transcription factor MdZF-HD11 regulates fruit softening by promoting Mdβ-GAL18 expression25
Deciphering molecular events behind Systemin-induced resistance to Botrytis cinerea in tomato plants25
Translating across kingdoms: target of rapamycin promotes protein synthesis through conserved and divergent pathways in plants25
Is now the time for a Rubiscuit or Ruburger? Increased interest in Rubisco as a food protein25
Metabolic link between auxin production and specialized metabolites in Sorghum bicolor25
Comparative analysis of storage compound metabolism in the embryo and endosperm of Cakile maritima seeds25
Carbon allocation in banana: revisiting assumptions and proposing research directions24
Can we improve the chilling tolerance of maize photosynthesis through breeding?24
Host-dependent specialized metabolism of nitrogen export in actinorhizal nodules induced by diazotrophic Actinomycetota Frankia cluster-224
Loss of HKT1;5D via a spontaneous terminal deletion elevates leaf sodium in bread wheat, but is independent of yield or salinity tolerance24
Cytokinin oxidase/dehydrogenase inhibitors: progress towards agricultural practice24
Lipid transfer protein VAS inhibits the hypersensitive response via reactive oxygen species signaling in Nicotiana benthamiana24
A spontaneous mutation in a key C4 pathway gene significantly alters leaf δ13C, uncoupling its relationship with water use efficiency and photosynthetic performance in Zea mays<24
Secure but flexible: temporary adhesion in mistletoe seedlings24
Steroidal glycoalkaloids contribute to anthracnose resistance in Solanum lycopersicum24
Modern elite winter wheat cultivars use two physiological pathways to achieve yield stability24
Thermomorphogenesis: opportunities and challenges in post-transcriptional regulation24
Higher order polyploids exhibit enhanced desiccation tolerance in the grass Microchloa caffra24
Jasmonate Hypersensitive 3 negatively regulates both jasmonate and ethylene-mediated responses in Arabidopsis24
Multiple caleosins have overlapping functions in oil accumulation and embryo development24
Sugar conundrum in plant–pathogen interactions: roles of invertase and sugar transporters depend on pathosystems24
Correction to: Hyperspectral imaging for chloroplast movement detection24
Nitric oxide as an integral element in priming-induced tolerance and plant stress memory24
Bristling with potential: evaluating the effects of awns on yield under heat stress24
13C labeling to determine intra-leaf photosynthetic heterogeneity dynamics during drought and rewatering24
Dendrocalamus farinosus SWEET14 is involved in source–sink carbohydrate partitioning24
How do brassinosteroids fit in bud outgrowth models?24
Crosstalk between Rho of Plants GTPase signalling and plant hormones24
Nitrogen demand and availability: relative roles in driving C3 plant responses to elevated CO224
Transcriptional regulation of triacylglycerol accumulation in plants under environmental stress conditions23
Plant hormones regulate inducible asexual reproduction in Kalanchoë pinnata23
Hyperspectral mapping of the response of grapevine cultivars to Plasmopara viticola infection at the tissue scale23
Toward understanding grapevine responses to climate change: a multi-stress and holistic approach23
Radiation use efficiency increased over a century of maize (Zea maysL.) breeding in the US corn belt23
Disentangling the genetic architecture of key traits for wheat hybrid seed production23
Large-scale identification of novel transcriptional regulators of the aliphatic glucosinolate pathway in Arabidopsis23
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