Journal of Experimental Botany

Papers
(The TQCC of Journal of Experimental Botany is 14. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-03-01 to 2024-03-01.)
ArticleCitations
The effect of increasing temperature on crop photosynthesis: from enzymes to ecosystems176
The physiology of drought stress in grapevine: towards an integrative definition of drought tolerance166
Significance of silicon uptake, transport, and deposition in plants126
Pinpointing secondary metabolites that shape the composition and function of the plant microbiome119
An evolutionary view of melatonin synthesis and metabolism related to its biological functions in plants117
Re-evaluation of the nor mutation and the role of the NAC-NOR transcription factor in tomato fruit ripening113
Tailoring plant-associated microbial inoculants in agriculture: a roadmap for successful application111
Integration of silicon and secondary metabolites in plants: a significant association in stress tolerance104
Shaping the leaf microbiota: plant–microbe–microbe interactions102
MYB21 interacts with MYC2 to control the expression of terpene synthase genes in flowers of Freesia hybrida and Arabidopsis thaliana100
Alleviation mechanisms of metal(loid) stress in plants by silicon: a review93
Plant nitrogen uptake and assimilation: regulation of cellular pH homeostasis87
How does nitrogen shape plant architecture?85
Diversity of plant heat shock factors: regulation, interactions, and functions85
Plant responses to climate change: metabolic changes under combined abiotic stresses84
Organic acids: versatile stress-response roles in plants84
Epigenetics: possible applications in climate-smart crop breeding82
Regulation of glucosinolate biosynthesis81
All together now: regulation of the iron deficiency response77
New evidence defining the evolutionary path of aquaporins regulating silicon uptake in land plants77
A heat stress responsive NAC transcription factor heterodimer plays key roles in rice grain filling75
Transcriptional integration of plant responses to iron availability73
Auxin-mediated responses under salt stress: from developmental regulation to biotechnological applications72
Overexpression of the manganese/cadmium transporter OsNRAMP5 reduces cadmium accumulation in rice grain72
A best-practice guide to predicting plant traits from leaf-level hyperspectral data using partial least squares regression69
ABI5 regulates ABA-induced anthocyanin biosynthesis by modulating the MYB1-bHLH3 complex in apple68
The amino acid transporter AAP1 mediates growth and grain yield by regulating neutral amino acid uptake and reallocation in Oryza sativa67
Volatile-mediated plant–plant interactions: volatile organic compounds as modulators of receiver plant defence, growth, and reproduction67
Cell wall thickness and composition are involved in photosynthetic limitation66
The sequence and thresholds of leaf hydraulic traits underlying grapevine varietal differences in drought tolerance66
The role of amino acid metabolism in signaling and metabolic adaptation to stress-induced energy deficiency in plants65
Recent insights into the metabolic adaptations of phosphorus-deprived plants64
Genetics and genomics of root system variation in adaptation to drought stress in cereal crops62
Phytomelatonin: an unexpected molecule with amazing performances in plants61
The transcription factor ZmNAC49 reduces stomatal density and improves drought tolerance in maize61
Photorespiration—how is it regulated and how does it regulate overall plant metabolism?61
ABA-responsive transcription factor bZIP1 is involved in modulating biosynthesis of phenolic acids and tanshinones in Salvia miltiorrhiza60
Pre-harvest sprouting in cereals: genetic and biochemical mechanisms60
Blocking intruders: inducible physico-chemical barriers against plant vascular wilt pathogens59
The Arabidopsis NRT1.1 transceptor coordinately controls auxin biosynthesis and transport to regulate root branching in response to nitrate59
Improving crop yield and resilience through optimization of photosynthesis: panacea or pipe dream?59
Rice NIN-LIKE PROTEIN 1 rapidly responds to nitrogen deficiency and improves yield and nitrogen use efficiency58
Involvement of the R2R3-MYB transcription factor MYB21 and its homologs in regulating flavonol accumulation in Arabidopsis stamen55
The transcription factor WRKY75 positively regulates jasmonate-mediated plant defense to necrotrophic fungal pathogens54
Multifaceted roles of nitric oxide in tomato fruit ripening: NO-induced metabolic rewiring and consequences for fruit quality traits54
Arabidopsis thaliana trehalose-6-phosphate phosphatase gene TPPI enhances drought tolerance by regulating stomatal apertures53
Hydrogen sulfide signaling in plant adaptations to adverse conditions: molecular mechanisms53
Beneficial soil-borne bacteria and fungi: a promising way to improve plant nitrogen acquisition53
Reactive oxygen species and organellar signaling52
Melatonin promotes Arabidopsis primary root growth in an IAA-dependent manner51
The hypoxia–reoxygenation stress in plants51
Plant signaling in biotic and abiotic stress51
Ethylene activation of carotenoid biosynthesis by a novel transcription factor CsERF06150
Rewilding crops for climate resilience: economic analysis and de novo domestication strategies50
The NAC transcription factor NAC019-A1 is a negative regulator of starch synthesis in wheat developing endosperm50
Silicon induces adventitious root formation in rice under arsenate stress with involvement of nitric oxide and indole-3-acetic acid50
Coordinated homeostasis of essential mineral nutrients: a focus on iron49
Root architecture for improved resource capture: trade-offs in complex environments49
From green to gold: agricultural revolution for food security48
Unique contributions of chlorophyll and nitrogen to predict crop photosynthetic capacity from leaf spectroscopy48
MS1, a direct target of MS188, regulates the expression of key sporophytic pollen coat protein genes in Arabidopsis47
Genetic basis of phenotypic plasticity and genotype × environment interactions in a multi-parental tomato population47
Arabidopsis K+ transporter HAK5-mediated high-affinity root K+ uptake is regulated by protein kinases CIPK1 and CIPK947
Ppd-H1integrates drought stress signals to control spike development and flowering time in barley47
A fruit ripening-associated transcription factor CsMADS5 positively regulates carotenoid biosynthesis in citrus46
Chloroplast dismantling in leaf senescence46
Maize transcription factor ZmBES1/BZR1-5 positively regulates kernel size46
Mild drought in the vegetative stage induces phenotypic, gene expression, and DNA methylation plasticity in Arabidopsis but no transgenerational effects46
Oxford Nanopore sequencing: new opportunities for plant genomics?46
Root anatomical traits contribute to deeper rooting of maize under compacted field conditions46
Purple acid phosphatase 10c encodes a major acid phosphatase that regulates plant growth under phosphate-deficient conditions in rice46
Prospects for the accelerated improvement of the resilient crop quinoa46
Rice F-bZIP transcription factors regulate the zinc deficiency response45
Flavonoids are indispensable for complete male fertility in rice45
The interaction between wheat roots and soil pores in structured field soil44
Linking signaling pathways to histone acetylation dynamics in plants44
The ABC transporter G subfamily in Arabidopsis thaliana43
Root phenotypes of young wheat plants grown in controlled environments show inconsistent correlation with mature root traits in the field43
Recognizing the hidden half in wheat: root system attributes associated with drought tolerance42
A blueberry MIR156a–SPL12 module coordinates the accumulation of chlorophylls and anthocyanins during fruit ripening42
Regulation of heat shock proteins 70 and their role in plant immunity41
ABF3 enhances drought tolerance via promoting ABA-induced stomatal closure by directly regulatingADF5inPopulus euphratica41
Molecular regulation of plant developmental transitions and plant architecture via PEPB family proteins: an update on mechanism of action41
High-throughput phenotyping using digital and hyperspectral imaging-derived biomarkers for genotypic nitrogen response41
Elucidating the role of polygalacturonase genes in strawberry fruit softening41
Biological nitrogen fixation in maize: optimizing nitrogenase expression in a root-associated diazotroph41
Feeling the heat: developmental and molecular responses of wheat and barley to high ambient temperatures40
Functions and prospects of melatonin in plant growth, yield, and quality40
Sucrose transport and metabolism control carbon partitioning between stem and grain in rice40
Nitric oxide and hydrogen sulfide modulate the NADPH-generating enzymatic system in higher plants40
The class II KNOX transcription factors KNAT3 and KNAT7 synergistically regulate monolignol biosynthesis in Arabidopsis40
Iron deficiency-inducible peptide-coding genes OsIMA1 and OsIMA2 positively regulate a major pathway of iron uptake and translocation in rice40
Red light-induced kumquat fruit coloration is attributable to increased carotenoid metabolism regulated by FcrNAC2240
Phenolamides in plants: an update on their function, regulation, and origin of their biosynthetic enzymes39
Gene regulatory networks controlled by FLOWERING LOCUS C that confer variation in seasonal flowering and life history39
A NAC transcription factor and its interaction protein hinder abscisic acid biosynthesis by synergistically repressing NCED5 in Citrus reticulata39
PLATZ2 negatively regulates salt tolerance in Arabidopsis seedlings by directly suppressing the expression of the CBL4/SOS3 and CBL10/SCaBP8 genes39
Molecular ecology of plant volatiles in interactions with insect herbivores39
Mycorrhizal symbiosis primes the accumulation of antiherbivore compounds and enhances herbivore mortality in tomato38
Phytosulfokine (PSK) precursor processing by subtilase SBT3.8 and PSK signaling improve drought stress tolerance in Arabidopsis38
Similar yet critically different: the distribution, dynamics and function of histone variants38
The WRKY transcription factor AaGSW2 promotes glandular trichome initiation in Artemisia annua38
Cytokinin regulates the activity of the inflorescence meristem and components of seed yield in oilseed rape38
Silicon: its ameliorative effect on plant defense against herbivory38
Phytoene synthase 2 can compensate for the absence of PSY1 in the control of color in Capsicum fruit38
Arabidopsis MADS-box factor AGL16 negatively regulates drought resistance via stomatal density and stomatal movement37
Exocytosis and endocytosis: coordinating and fine-tuning the polar tip growth domain in pollen tubes37
Dimethylarsinic acid is the causal agent inducing rice straighthead disease37
Successful field performance in warm and dry environments of soybean expressing the sunflower transcription factor HB437
Molecular plant responses to combined abiotic stresses put a spotlight on unknown and abundant genes37
Characterization of a caffeoyl-CoA O-methyltransferase-like enzyme involved in biosynthesis of polymethoxylated flavones in Citrus reticulata37
Mutations in the tomato gibberellin receptors suppress xylem proliferation and reduce water loss under water-deficit conditions37
Every cloud has a silver lining: how abiotic stresses affect gene expression in plant-pathogen interactions37
Phycobiliproteins from extreme environments and their potential applications37
Natural variations in the P-type ATPase heavy metal transporter gene ZmHMA3 control cadmium accumulation in maize grains36
Regulation of alternative splicing in response to temperature variation in plants36
Unraveling the sugar code: the role of microbial extracellular glycans in plant–microbe interactions36
Melatonin enhances stress tolerance in pigeon pea by promoting flavonoid enrichment, particularly luteolin in response to salt stress36
The CLE53–SUNN genetic pathway negatively regulates arbuscular mycorrhiza root colonization in Medicago truncatula36
NRT1.1-centered nitrate signaling in plants35
Inducible biosynthesis and immune function of the systemic acquired resistance inducer N-hydroxypipecolic acid in monocotyledonous and dicotyledonous plants35
The impact of the rhizobia–legume symbiosis on host root system architecture35
A new adenylyl cyclase, putative disease-resistance RPP13-like protein 3, participates in abscisic acid-mediated resistance to heat stress in maize35
Micronutrient homeostasis in plants for more sustainable agriculture and healthier human nutrition35
PHYTOCHROME INTERACTING FACTORS PIF4 and PIF5 promote heat stress induced leaf senescence in Arabidopsis35
KNOX protein KNAT1 regulates fruitlet abscission in litchi by repressing ethylene biosynthetic genes35
Phylogeny and gene expression of the complete NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER FAMILY in Triticum aestivum34
An evolutionary population structure model reveals pleiotropic effects ofGmPDATfor traits related to seed size and oil content in soybean34
Outgrowth of the axillary bud in rose is controlled by sugar metabolism and signalling34
Estimating the contribution of plant traits to light partitioning in simultaneous maize/soybean intercropping34
GABA signaling in plants: targeting the missing pieces of the puzzle34
In pursuit of a better world: crop improvement and the CGIAR33
Siliplant1 protein precipitates silica in sorghum silica cells33
SNF1-related protein kinase 1: the many-faced signaling hub regulating developmental plasticity in plants33
Multifaceted roles of HEAT SHOCK PROTEIN 90 molecular chaperones in plant development33
Interactions of melatonin, reactive oxygen species, and nitric oxide during fruit ripening: an update and prospective view32
Iron in plant–pathogen interactions32
Transposon insertions within alleles of BnaFLC.A10 and BnaFLC.A2 are associated with seasonal crop type in rapeseed32
Beneficial rhizobacteria Pseudomonas simiae WCS417 induce major transcriptional changes in plant sugar transport32
Auxin and gibberellin signaling cross-talk promotes hypocotyl xylem expansion and cambium homeostasis32
Stress effects on the reactive oxygen species-dependent regulation of plant growth and development31
Nitrate-responsive NIN-like protein transcription factors perform unique and redundant roles in Arabidopsis31
Epigenetic approaches to crop breeding: current status and perspectives31
The evolutionary origins of auxin transport: what we know and what we need to know31
Melatonin enhances stem strength by increasing lignin content and secondary cell wall thickness in herbaceous peony31
Host susceptibility factors render ripe tomato fruit vulnerable to fungal disease despite active immune responses31
Reproductive resilience but not root architecture underpins yield improvement under drought in maize31
Rare earth elements induce cytoskeleton-dependent and PI4P-associated rearrangement of SYT1/SYT5 endoplasmic reticulum–plasma membrane contact site complexes in Arabidopsis31
Contributions of sugar transporters to crop yield and fruit quality31
Vacuolar sucrose homeostasis is critical for plant development, seed properties, and night-time survival in Arabidopsis31
The WOX family transcriptional regulator SlLAM1 controls compound leaf and floral organ development inSolanum lycopersicum31
Overexpression of HvAKT1 improves drought tolerance in barley by regulating root ion homeostasis and ROS and NO signaling30
Variation between rice accessions in photosynthetic induction in flag leaves and underlying mechanisms30
Nitric oxide signalling in plant interactions with pathogenic fungi and oomycetes30
Overexpression of bHLH95, a basic helix–loop–helix transcription factor family member, impacts trichome formation via regulating gibberellin biosynthesis in tomato30
The case of tryptamine and serotonin in plants: a mysterious precursor for an illustrious metabolite30
ZmMs25 encoding a plastid-localized fatty acyl reductase is critical for anther and pollen development in maize30
Melatonin biosynthesis and signal transduction in plants in response to environmental conditions30
RING finger ubiquitin E3 ligase gene TaSDIR1-4A contributes to determination of grain size in common wheat30
Phytomelatonin as a central molecule in plant disease resistance29
Overproduction of ascorbic acid impairs pollen fertility in tomato29
Bottlenecks and opportunities in field-based high-throughput phenotyping for heat and drought stress29
PHOSPHATIDYLETHANOLAMINE-BINDING PROTEINS: the conductors of dual reproduction in plants with vegetative storage organs29
Alternate expression of CONSTANS-LIKE 4 in short days and CONSTANS in long days facilitates day-neutral response in Rosa chinensis29
Plant and animal chromatin three-dimensional organization: similar structures but different functions29
Maize YSL2 is required for iron distribution and development in kernels29
Involvement of Arabidopsis phospholipase D δ in regulation of ROS-mediated microtubule organization and stomatal movement upon heat shock29
WUSCHEL in the shoot apical meristem: old player, new tricks29
Ferroptosis in plants: triggers, proposed mechanisms, and the role of iron in modulating cell death29
What is the age of flowering plants?28
Abscisic acid insensitive 4 interacts with ICE1 and JAZ proteins to regulate ABA signaling-mediated cold tolerance in apple28
A model for phenotyping crop fractional vegetation cover using imagery from unmanned aerial vehicles28
High day and night temperatures distinctively disrupt fatty acid and jasmonic acid metabolism, inducing male sterility in cotton28
BEL1-LIKE HOMEODOMAIN4 regulates chlorophyll accumulation, chloroplast development, and cell wall metabolism in tomato fruit28
Rapid regulation of photosynthetic light harvesting in the absence of minor antenna and reaction centre complexes28
Harnessing translational research in wheat for climate resilience28
Arabidopsis SIGMA FACTOR BINDING PROTEIN1 (SIB1) and SIB2 inhibit WRKY75 function in abscisic acid-mediated leaf senescence and seed germination28
A natural antisense transcript acts as a negative regulator for the maize drought stress response gene ZmNAC4828
Pod indehiscence in common bean is associated with the fine regulation ofPvMYB2628
Maize PHYTOMELATONIN RECEPTOR1 functions in plant tolerance to osmotic and drought stress27
Chilli veinal mottle virus HCPro interacts with catalase to facilitate virus infection in Nicotiana tabacum27
Elevated CO2 has concurrent effects on leaf and grain metabolism but minimal effects on yield in wheat27
The tonoplast-localized transporter OsNRAMP2 is involved in iron homeostasis and affects seed germination in rice27
TEOSINTE BRANCHED1 regulates height and stem internode length in bread wheat27
Mechanisms underlying iron deficiency-induced resistance against pathogens with different lifestyles27
A CYC/TB1-type TCP transcription factor controls spikelet meristem identity in barley27
Cell wall composition and thickness affect mesophyll conductance to CO2 diffusion inHelianthus annuusunder water deprivation27
Melatonin synthesis enzymes interact with ascorbate peroxidase to protect against oxidative stress in cassava27
Endogenous indole-3-acetamide levels contribute to the crosstalk between auxin and abscisic acid, and trigger plant stress responses in Arabidopsis27
Low temperature modulates natural peel degreening in lemon fruit independently of endogenous ethylene26
Single-cell analysis of cell identity in the Arabidopsis root apical meristem: insights and opportunities26
High affinity promoter binding of STOP1 is essential for early expression of novel aluminum-induced resistance genes GDH1 and GDH2 in Arabidopsis26
Diphenylurea-derived cytokinin oxidase/dehydrogenase inhibitors for biotechnology and agriculture26
GARP transcription factors repress Arabidopsis nitrogen starvation response via ROS-dependent and -independent pathways26
The many facets of protein ubiquitination and degradation in plant root iron-deficiency responses26
MYB transcription factors GmMYBA2 and GmMYBR function in a feedback loop to control pigmentation of seed coat in soybean26
Rice breeding for yield under drought has selected for longer flag leaves and lower stomatal density26
The basic helix-loop-helix transcription factor bHLH95 affects fruit ripening and multiple metabolisms in tomato26
Temperature regulation of plant hormone signaling during stress and development26
Highly dynamic, coordinated, and stage-specific profiles are revealed by a multi-omics integrative analysis during tuberous root development in cassava26
Iron–sulfur proteins in plant mitochondria: roles and maturation26
Class I TCP transcription factors regulate trichome branching and cuticle development in Arabidopsis26
Overgrowth mutants determine the causal role of gibberellin GA2oxidaseA13 in Rht12 dwarfism of wheat26
Abscisic acid homeostasis is mediated by feedback regulation of MdMYB88 and MdMYB12426
The cell biology of zinc26
Temperature response of wheat affects final height and the timing of stem elongation under field conditions26
Molecular responses of legumes to abiotic stress: post-translational modifications of proteins and redox signaling26
WRKY10 transcriptional regulatory cascades in rice are involved in basal defense and Xa1-mediated resistance25
Management of plant central metabolism by SnRK1 protein kinases25
Biomass composition explains fruit relative growth rate and discriminates climacteric from non-climacteric species25
Regulatory mechanisms underlying cuticular wax biosynthesis25
Molybdenum: More than an essential element25
Imaging flowers: a guide to current microscopy and tomography techniques to study flower development25
Transcriptome-wide analysis of epitranscriptome and translational efficiency associated with heterosis in maize25
Melatonin as a regulator of plant ionic homeostasis: implications for abiotic stress tolerance25
High sink strength prevents photosynthetic down-regulation in cassava grown at elevated CO2 concentration25
Immunity-associated volatile emissions of β-ionone and nonanal propagate defence responses in neighbouring barley plants25
Interactions between the N- and C-termini of the mechanosensitive ion channel AtMSL10 are consistent with a three-step mechanism for activation25
The cysteine-rich receptor-like kinase TaCRK3 contributes to defense against Rhizoctonia cerealis in wheat24
Nitric oxide production and signalling in algae24
Treat and trick: common regulation and manipulation of sugar transporters during sink establishment by the plant and the pathogen24
Cuticular waxes of nectarines during fruit development in relation to surface conductance and susceptibility to Monilinia laxa24
The grapevine NIP2;1 aquaporin is a silicon channel24
Iron metabolism strategies in diatoms24
Ascorbate oxidation activates systemic defence against root-knot nematode Meloidogyne graminicola in rice24
A SlMYB75-centred transcriptional cascade regulates trichome formation and sesquiterpene accumulation in tomato24
TGA class II transcription factors are essential to restrict oxidative stress in response to UV-B stress in Arabidopsis24
Ear photosynthesis in C3 cereals and its contribution to grain yield: methodologies, controversies, and perspectives24
Phytohormones and their crosstalk in regulating stomatal development and patterning24
Auxin biosynthesis and cellular efflux act together to regulate leaf vein patterning24
Tomato protein phosphatase 2C influences the onset of fruit ripening and fruit glossiness24
Modifying root-to-shoot ratio improves root water influxes in wheat under drought stress24
Improving C4 photosynthesis to increase productivity under optimal and suboptimal conditions24
Isoflavone malonyl-CoA acyltransferase GmMaT2 is involved in nodulation of soybean by modifying synthesis and secretion of isoflavones24
The transcription factor MML4_D12 regulates fiber development through interplay with the WD40-repeat protein WDR in cotton24
Chloride is beneficial for growth of the xerophyte Pugionium cornutum by enhancing osmotic adjustment capacity under salt and drought stresses24
Belowground plant–microbe communications via volatile compounds24
LEAfing through literature: late embryogenesis abundant proteins coming of age—achievements and perspectives24
Cytokinin oxidase/dehydrogenase family genes exhibit functional divergence and overlap in rice growth and development, especially in control of tillering24
How dry is dry? Molecular mobility in relation to thallus water content in a lichen23
Transcriptional, hormonal, and metabolic changes in susceptible grape berries under powdery mildew infection23
Effect of gibberellin-sensitive Rht18 and gibberellin-insensitive Rht-D1b dwarfing genes on vegetative and reproductive growth in bread wheat23
Detection of the metabolic response to drought stress using hyperspectral reflectance23
Abiotic stress-mediated modulation of the chromatin landscape in Arabidopsis thaliana23
Ethephon-induced changes in antioxidants and phenolic compounds in anthocyanin-producing black carrot hairy root cultures23
Root stem cell niche networks: it’s complexed! Insights from Arabidopsis23
Ca2+-dependent nuclease is involved in DNA degradation during the formation of the secretory cavity by programmed cell death in fruit of Citrus grandis ‘Tomentosa’23
Silicon in plant biology: from past to present, and future challenges23
Phenotyping for waterlogging tolerance in crops: current trends and future prospects23
Phloem loading in rice leaves depends strongly on the apoplastic pathway23
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