OOIR: Observatory of International Research

Papers

(The TQCC of Journal of Biochemistry is 5. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-11-01 to 2024-11-01.)

Article	Citations
D-Amino acid metabolism in bacteria	41
CircRNA_0092516 regulates chondrocyte proliferation and apoptosis in osteoarthritis through the miR-337-3p/PTEN axis	41
Targeting EZH2 as cancer therapy	37
Emerging solvatochromic push–pull dyes for monitoring the lipid order of biomembranes in live cells	37
circGFRA1 affects the sensitivity of triple-negative breast cancer cells to paclitaxel via the miR-361-5p/TLR4 pathway	25
Down-regulation of lncRNA SNHG5 relieves sepsis-induced acute kidney injury by regulating the miR-374a-3p/TLR4/NF-κB pathway	23
MiR-20a-5p overexpression prevented diabetic cardiomyopathy via inhibition of cardiomyocyte apoptosis, hypertrophy, fibrosis and JNK/NF-κB signalling pathway	22
Structural catalog of core Atg proteins opens new era of autophagy research	21
The nucleolus from a liquid droplet perspective	21
G-quadruplex binding protein Rif1, a key regulator of replication timing	20
A dynamic actin-dependent nucleoskeleton and cell identity	19
Emerging roles of extracellular vesicles in physiology and disease	19
Targeting Nrf2-antioxidant signalling reverses acquired cabazitaxel resistance in prostate cancer cells	18
Sweet modification and regulation of death receptor signalling pathway	17
Impact of exosome-mediated feto-maternal interactions on pregnancy maintenance and development of obstetric complications	17
Long non-coding RNA DANCR accelerates colorectal cancer progression via regulating the miR-185-5p/HMGA2 axis	17
Regulation of Reelin functions by specific proteolytic processing in the brain	17
Japonica Array NEO with increased genome-wide coverage and abundant disease risk SNPs	16
CEBPB is required for NRF2-mediated drug resistance in NRF2-activated non-small cell lung cancer cells	15
The disulfiram/copper complex induces apoptosis and inhibits tumour growth in human osteosarcoma by activating the ROS/JNK signalling pathway	15
SARS-CoV-2 spike protein binding selectively accelerates substrate-specific catalytic activity of ACE2	15
Long noncoding RNA and phase separation in cellular stress response	14
GlcNAc-Asn is a biomarker for NGLY1 deficiency	14
Circ_0000190 sponges miR-382-5p to suppress cell proliferation and motility and promote cell death by targeting ZNRF3 in gastric cancer	14
The apelin/APJ system in the regulation of vascular tone: friend or foe?	14

NRF2 pathway activation attenuates ageing-related renal phenotypes due to α-klotho deficiency	14
The circadian clock and cancer: links between circadian disruption and disease Pathology	14
ETV4 mediates the Wnt/β-catenin pathway through transcriptional activation of ANXA2 to promote hepatitis B virus-associated liver hepatocellular carcinoma progression	13
Abundant oleoyl-lysophosphatidylethanolamine in brain stimulates neurite outgrowth and protects against glutamate toxicity in cultured cortical neurons	13
Branched ubiquitin code: from basic biology to targeted protein degradation	13
Post-translational modification enzymes as key regulators of ciliary protein trafficking	12
MiR-133a-3p inhibits the malignant progression of oesophageal cancer by targeting CDCA8	12
Pathogenic and protective roles of extracellular vesicles in neurodegenerative diseases	12
Potential roles of G-quadruplex structures in RNA granules for physiological and pathological phase separation	12
Structural and biochemical analyses of the nucleosome containing Komagataella pastoris histones	12
Cancer-associated mutations in SF3B1 disrupt the interaction between SF3B1 and DDX42	11
PCYT2 synthesizes CDP-glycerol in mammals and reduced PCYT2 enhances the expression of functionally glycosylated α-dystroglycan	11
In vitroreconstitution of theEscherichia coli70S ribosome with a full set of recombinant ribosomal proteins	11
Structural insights into endothelin receptor signalling	11
Cellular senescence and its impact on the circadian clock	11
Characterization of recombinant murine GDE4 and GDE7, enzymes producing lysophosphatidic acid and/or cyclic phosphatidic acid	11
Toxicity and membrane perturbation properties of the ribotoxin-like protein Ageritin	10
Escherichia coli amino acid auxotrophic expression host strains for investigating protein structure–function relationships	10
Lidocaine activates autophagy of astrocytes and ameliorates chronic constriction injury-induced neuropathic pain	10
Functional analyses of plasmodium ferredoxin Asp97Tyr mutant related to artemisinin resistance of human malaria parasites	10
Nascent chain-mediated translation regulation in bacteria: translation arrest and intrinsic ribosome destabilization	10
A cyclic lipopeptide surfactin is a species-selective Hsp90 inhibitor that suppresses cyanobacterial growth	10
The cap-specific m6A methyltransferase, PCIF1/CAPAM, is dynamically recruited to the gene promoter in a transcription-dependent manner	10
Biotinylation-based proximity labelling proteomics: basics, applications and technical considerations	9
Long non-coding RNA ZEB1-AS1 promotes proliferation and metastasis of hepatocellular carcinoma cells by targeting miR-299-3p/E2F1 axis	9
Polyamines produced by an extreme thermophile are essential for cell growth at high temperature	9
Ferroptosis model system by the re-expression of BACH1	9
Human TRPV1 and TRPA1 are receptors for bacterial quorum sensing molecules	9
Effects of cryptochrome-modulating compounds on circadian behavioural rhythms in zebrafish	9
Inner nuclear membrane proteins Lem2 and Bqt4 interact with different lipid synthesis enzymes in fission yeast	9
Patient-derived gene and protein expression signatures of NGLY1 deficiency	9
LncRNA PART1 promotes cell proliferation and inhibits apoptosis of oral squamous cell carcinoma by blocking EZH2 degradation	9
2,2,6,6-Tetramethylpiperidine-1-oxyl acts as a volatile inhibitor of ferroptosis and neurological injury	8
The protein N-terminal acetyltransferase A complex contributes to yeast mitophagy via promoting expression and phosphorylation of Atg32	8
LncRNA HEIH promotes cell proliferation, migration and invasion by suppressing miR-214-3p in gastric carcinoma	8
Kinetic analysis of the inhibition mechanism of bovine mitochondrial F1-ATPase inhibitory protein using biochemical assay	8
CircRPPH1 promotes cell proliferation, migration and invasion of non-small cell lung cancer via the PI3K/AKT and JAK2/STAT3 signalling axes	8
Targeted protein degradation and drug discovery	8
Identification of PTPRσ-interacting proteins by proximity-labelling assay	8
Inhibition of flippase-like activity by tubulin regulates phosphatidylserine exposure in erythrocytes from hypertensive and diabetic patients	8
Structural analysis and reaction mechanism of malate dehydrogenase from Geobacillus stearothermophilus	7
Upregulated mGluR5 induces ER stress and DNA damage by regulating the NMDA receptor subunit NR2B	7
Identification and analysis of short open reading frames (sORFs) in the initially annotated noncoding RNA LINC00493 from human cells	7
Adipose tissue thermogenesis by calcium futile cycling	7
Circ_0000514 promotes breast cancer progression by regulating the miR-296-5p/CXCL10 axis	7
Cloning and characterization of Thioredoxin 1 from the Cnidarian Hydra	7
A light way for nuclear cell biologists	7
Physiological importance of NGLY1, as revealed by rodent model analyses	7
DA-Raf and the MEK inhibitor trametinib reverse skeletal myocyte differentiation inhibition or muscle atrophy caused by myostatin and GDF11 through the non-Smad Ras–ERK pathway	7
MiR-142-5p promotes retinoblastoma cell proliferation, migration and invasion by targeting PTEN	7

Novel photochromic inhibitor for mitotic kinesin Eg5 which forms multiple isomerization states	7
Cell engineering for the production of hybrid-type N-glycans in HEK293 cells	7
Nanog-mediated stem cell properties are critical for MBNL3-associated paclitaxel resistance of ovarian cancer	7
PPARα activation partially drives NAFLD development in liver-specific Hnf4a-null mice	7
Structure of the Acinetobacter baumannii PmrA receiver domain and insights into clinical mutants affecting DNA binding and promoting colistin resistance	7
Tracing the NGLY1 footprints: insights from Drosophila	7
Expression and affinity purification of recombinant mammalian mitochondrial ribosomal small subunit (MRPS) proteins and protein–protein interaction analysis indicate putative role in tumourigenic cell	7
Ever-expanding NGLY1 biology	7
The N2N3 domains of ClfA, FnbpA and FnbpB in Staphylococcus aureus bind to human complement factor H, and their antibodies enhance the bactericidal capability of human blood	7
Post-translational modification of lysine residues in erythrocyte α-synuclein	6
Differential use of p24 family members as cargo receptors for the transport of glycosylphosphatidylinositol-anchored proteins and Wnt1	6
The role of TREM2 N-glycans in trafficking to the cell surface and signal transduction of TREM2	6
Jaw1/LRMP is associated with the maintenance of Golgi ribbon structure	6
LUBAC-mediated linear ubiquitination in tissue homeostasis and disease	6
MITOL regulates phosphatidic acid-binding activity of RMDN3/PTPIP51	6
Karyopherin-βs play a key role as a phase separation regulator	6
Characterization of the aberrant splicing of MAP3K7 induced by cancer-associated SF3B1 mutation	6
Chondroitin sulfate glycosaminoglycans function as extra/pericellular ligands for cell surface receptors	6
The molecular mechanisms of mammalian sperm maturation regulated by NELL2-ROS1 lumicrine signaling	6
A sweet protein monellin as a non-antibody scaffold for synthetic binding proteins	6
Capn4 aggravates angiotensin II-induced cardiac hypertrophy by activating the IGF-AKT signalling pathway	6
Genetic analysis of tellurate reduction reveals the selenate/tellurate reductase genes ynfEF and the transcriptional regulation of moeA by NsrR in Escherichia coli	6
Assay for the peptide:N-glycanase/NGLY1 and disease-specific biomarkers for diagnosing NGLY1 deficiency	6
A slight bending of an α-helix in FliM creates a counterclockwise-locked structure of the flagellar motor in Vibrio	6
Interaction of FlhF, SRP-like GTPase with FliF, MS ring component assembling the initial structure of flagella in marine Vibrio	6
High-level expression of human CH2 domain from the Fc region in Pichia pastoris and preparation of anti-CH2 antibodies	6
Classification of proteins inducing liquid–liquid phase separation: sequential, structural and functional characterization	6
Lysine Acetyltransferases (KATs) in Disguise: Diseases Implications	6
Direct and specific binding of cholesterol to the mitochondrial translocator protein (TSPO) using PhotoClick cholesterol analogue	6
Tau-binding protein PRMT8 facilitates vacuole degeneration in the brain	6
Circular RNA circNINL promotes breast cancer progression through activating β-catenin signaling via miR-921/ADAM9 axis	6
Visualization of Reelin Secretion from Primary Cultured Neurons by Bioluminescence Imaging	5
Autophagy-independent cytoprotection by optineurin from toxicity of aggregates formed by mutant huntingtin and mutant ataxin-3	5
Epigenetic and environmental regulation of adipocyte function	5
p62 bodies: cytosolic zoning by phase separation	5
Cloaking the ACE2 receptor with salivary cationic proteins inhibits SARS-CoV-2 entry	5
NGLY1: insights from Caenorhabditis elegans	5
Antiviral activity and mechanism of ESC-1GN from skin secretion of Hylarana guentheri against influenza A virus	5
Development of cisplatin resistance in breast cancer MCF7 cells by up-regulating aldo-keto reductase 1C3 expression, glutathione synthesis and proteasomal proteolysis	5
Inhibitory effect of ascorbate on tryptophan 2,3-dioxygenase	5
Proofreading of protein localization mediated by a mitochondrial AAA-ATPase Msp1	5
New insights into the regulatory roles of glutathione in NLRP3-inflammasome-mediated immune and inflammatory responses	5
Efficient induction of proximity-dependent labelling by biotin feeding in BMAL1-BioID knock-in mice	5
The protein level of the tumour-promoting factor SET is regulated by cell density	5
Components from spider venom activate macrophages against glioblastoma cells: new potential adjuvants for anticancer immunotherapy	5
Molecular connections between circadian clock and health/ageing	5
Structural studies of reelin N-terminal region provides insights into a unique structural arrangement and functional multimerization	5
Interaction between a fluoroquinolone derivative and RNAs with a single bulge	5
Lemur tail kinase 1 (LMTK1) regulates the endosomal localization of β-secretase BACE1	5
Compounds in cigarette smoke induce EGR1 expression via the AHR, resulting in apoptosis and COPD	5
Molecular and functional characaterization of the novel odorant-binding protein geneAccOBP10fromApis cerana cerana	5
A circular RNA derived from FAT atypical cadherin 3 promotes lung cancer progression via forming a regulatory loop with oncogenic ELAV like RNA binding protein 1	5
Functional complementation of V-ATPase a subunit isoforms in osteoclasts	5
Identification of novel heat shock-induced long non-coding RNA in human cells	5
Ubiquitin-dependent rapid degradation conceals a cell-protective function of cytoplasmic SIRT3 against oxidative stress	5
Nucleoskeleton proteins for nuclear dynamics	5