Developmental Biology

Papers
(The TQCC of Developmental Biology is 8. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-07-01 to 2024-07-01.)
ArticleCitations
YAP1 and its fusion proteins in cancer initiation, progression and therapeutic resistance77
Modeling human embryo development with embryonic and extra-embryonic stem cells38
Human gastrulation: The embryo and its models38
Cell competition: A historical perspective38
The developmental biology of kinesins32
Seeing stars: Development and function of retinal astrocytes30
A developmental perspective on the evolution of the nervous system28
Vascular deficiencies in renal organoids and ex vivo kidney organogenesis26
Evolution of organoid technology: Lessons learnt in Co-Culture systems from developmental biology26
Cell competition-induced apical elimination of transformed cells, EDAC, orchestrates the cellular homeostasis26
Neural crest metabolism: At the crossroads of development and disease26
Identification of novel human Wnt target genes using adult endodermal tissue-derived organoids25
Mechanisms of vitamin A metabolism and deficiency in the mammalian and fly visual system25
Retinoic acid signaling restricts the size of the first heart field within the anterior lateral plate mesoderm25
Molecular mechanisms regulating axon responsiveness at the midline25
VEGF signaling activates the matrix metalloproteinases, MmpL7 and MmpL5 at the sites of active skeletal growth and MmpL7 regulates skeletal elongation25
Vitamin A1/A2 chromophore exchange: Its role in spectral tuning and visual plasticity24
Development and maintenance of vision’s first synapse24
Postembryonic screen for mutations affecting spine development in zebrafish24
Conserved and context-dependent roles for pdgfrb signaling during zebrafish vascular mural cell development24
The (unusual) heuristic value of Hox gene clusters; a matter of time?24
The role of cnidarian developmental biology in unraveling axis formation and Wnt signaling24
A systematic, label-free method for identifying RNA-associated proteins in vivo provides insights into vertebrate ciliary beating machinery23
Wnt signaling determines body axis polarity in regenerating Hydra tissue fragments23
SHROOM3 is downstream of the planar cell polarity pathway and loss-of-function results in congenital heart defects23
Gastruloids: Pluripotent stem cell models of mammalian gastrulation and embryo engineering22
There and back again: The mechanisms of differentiation and transdifferentiation in Drosophila blood cells22
Build me up optic cup: Intrinsic and extrinsic mechanisms of vertebrate eye morphogenesis22
Shark and ray genomics for disentangling their morphological diversity and vertebrate evolution22
Lamellipodia-like protrusions and focal adhesions contribute to collective cell migration in zebrafish22
Developmental basis of trachea-esophageal birth defects22
Conditional gene knockdowns in sea urchins using caged morpholinos21
BMP signaling plays a role in anterior-neural/head development, but not organizer activity, in the gastropod Crepidula fornicata21
Ets1 functions partially redundantly with Etv2 to promote embryonic vasculogenesis and angiogenesis in zebrafish21
The role of Xenopus developmental biology in unraveling Wnt signalling and antero-posterior axis formation21
MicroRNA-21 is involved in oocyte maturation, blastocyst formation, and pre-implantation embryo development21
A single-cell guide to retinal development: Cell fate decisions of multipotent retinal progenitors in scRNA-seq21
The evolutionary history and spectral tuning of vertebrate visual opsins20
Human neural organoids: Models for developmental neurobiology and disease20
Developmental origins of transgenerational sperm histone retention following ancestral exposures20
Wnt/β-catenin signaling acts cell-autonomously to promote cardiomyocyte regeneration in the zebrafish heart20
Trim-Away mediated knock down uncovers a new function for Lbh during gastrulation of Xenopus laevis.20
Development and diversification of bipolar interneurons in the mammalian retina20
Temporal progression of Drosophila medulla neuroblasts generates the transcription factor combination to control T1 neuron morphogenesis19
Prdm1 overexpression causes a photoreceptor fate-shift in nascent, but not mature, bipolar cells19
Balancing energy expenditure and storage with growth and biosynthesis during Drosophila development19
A brief history of the segmentation clock18
CRISPR-Cas9 editing of non-coding genomic loci as a means of controlling gene expression in the sea urchin18
Epigenetic regulation of drosophila germline stem cell maintenance and differentiation18
Temporal single-cell transcriptomes of zebrafish spinal cord pMN progenitors reveal distinct neuronal and glial progenitor populations18
DNA methylation and the core pluripotency network18
Transcriptional and epigenetic control of hematopoietic stem cell fate decisions in vertebrates17
Histone methyltransferase activity programs nuclear peripheral genome positioning17
Hexagonal patterning of the Drosophila eye17
The unfolding of the Hippo signaling pathway17
OFCD syndrome and extraembryonic defects are revealed by conditional mutation of the Polycomb-group repressive complex 1.1 (PRC1.1) gene BCOR17
Human retinal model systems: Strengths, weaknesses, and future directions17
Developmental plasticity and the response to nutrient stress in Caenorhabditis elegans17
Evo-Devo of Urbilateria and its larval forms17
Fish models for investigating nutritional regulation of embryonic development17
Modeling mammalian trunk development in a dish17
Multiple roles for Pax2 in the embryonic mouse eye16
The FGF-AKT pathway is necessary for cardiomyocyte survival for heart regeneration in zebrafish16
Molecular detection of maturation stages in the developing kidney16
The actin polymerization factor Diaphanous and the actin severing protein Flightless I collaborate to regulate sarcomere size16
CBP/p300 homologs CBP2 and CBP3 play distinct roles in planarian stem cell function15
Development of the vertebrate retinal direction-selective circuit15
A conserved role for arrow in posterior axis patterning across Arthropoda15
Pdgfra regulates multipotent cell differentiation towards chondrocytes via inhibiting Wnt9a/beta-catenin pathway during chondrocranial cartilage development15
Nucleoporin NUP205 plays a critical role in cilia and congenital disease15
Single-cell transcriptomics in the Drosophila visual system: Advances and perspectives on cell identity regulation, connectivity, and neuronal diversity evolution15
The core SWI/SNF catalytic subunit Brg1 regulates nephron progenitor cell proliferation and differentiation15
An exciting period of Drosophila developmental biology: Of imaginal discs, clones, compartments, parasegments and homeotic genes15
CREB-binding protein (CBP) gene family regulates planarian survival and stem cell differentiation15
Transcriptional mechanisms of motor neuron development in vertebrates and invertebrates15
Returning to kidney development to deliver synthetic kidneys14
Mouse models to study the pathophysiology of combined methylmalonic acidemia and homocystinuria, cblC type14
CRISPR/Cas9-mediated mutation reveals Pax6 is essential for development of the compound eye in Decapoda Exopalaemon carinicauda14
Wnt/β-catenin signaling pathway regulates cell proliferation but not muscle dedifferentiation nor apoptosis during sea cucumber intestinal regeneration14
Transcriptional profiling from whole embryos to single neuroblast lineages in Drosophila14
The great small organisms of developmental genetics: Caenorhabditis elegans and Drosophila melanogaster14
Progenitors in prostate development and disease14
Mcrs1 interacts with Six1 to influence early craniofacial and otic development14
Diverse cellular origins of adult blood vascular endothelial cells14
The forkhead factor Foxl2 participates in the ovarian differentiation of Chinese soft-shelled turtle Pelodiscus sinensis14
Nutrient availability contributes to a graded refractory period for regeneration in Xenopus tropicalis14
A conserved node in the regulation of Vasa between an induced and an inherited program of primordial germ cell specification14
Apcdd1 is a dual BMP/Wnt inhibitor in the developing nervous system and skin14
Rethinking embryology in vitro: A synergy between engineering, data science and theory14
Reassembling gastrulation14
Hif1α and Wnt are required for posterior gene expression during Xenopus tropicalis tail regeneration13
Temperature-Induced uncoupling of cell cycle regulators13
FGF signaling promotes myoblast proliferation through activation of wingless signaling13
Mechanosignaling in vertebrate development13
Drosophila E93 promotes adult development and suppresses larval responses to ecdysone during metamorphosis13
Cell shape changes during larval body plan development in Clytia hemisphaerica13
The tissues and regulatory pattern of limb chondrogenesis13
Development and regeneration dynamics of the Medaka notochord12
Is zebrafish heart regeneration “complete”? Lineage-restricted cardiomyocytes proliferate to pre-injury numbers but some fail to differentiate in fibrotic hearts12
IGF1R constitutive activation expands luminal progenitors and influences lineage differentiation during breast tumorigenesis12
Development and regeneration of the crushing dentition in skates (Rajidae)12
Non-coding RNAs repressive role in post-transcriptional processing of RUNX2 during the acquisition of the osteogenic phenotype of periodontal ligament mesenchymal stem cells12
The role of glucose in physiological and pathological heart formation12
Development and patterning of rib primordia are dependent on associated musculature12
Essential function and targets of BMP signaling during midbrain neural crest delamination12
Thyroid hormone regulates abrupt skin morphogenesis during zebrafish postembryonic development12
Leucine zipper transcription factor-like 1 (LZTFL1), an intraflagellar transporter protein 27 (IFT27) associated protein, is required for normal sperm function and male fertility11
Inferring temporal organization of postembryonic development from high-content behavioral tracking11
Reflections on the past, present and future of developmental biology11
WNT signalling supported by MEK/ERK inhibition is essential to maintain pluripotency in bovine preimplantation embryo11
Stressful development: integrating endoderm development, stress, and longevity11
Temporal cell fate determination in the spinal cord is mediated by the duration of Notch signalling11
Semper's cells in the insect compound eye: Insights into ocular form and function11
Mef2c factors are required for early but not late addition of cardiomyocytes to the ventricle11
Physiological electric fields induce directional migration of mammalian cranial neural crest cells11
Zebrafish can regenerate endoskeleton in larval pectoral fin but the regenerative ability declines11
The role of mechanosensor Piezo1 in bone homeostasis and mechanobiology11
Wampa is a dynein subunit required for axonemal assembly and male fertility in Drosophila11
Role of BMP signaling during early development of the annelid Capitella teleta11
Foxa1 and Foxa2 orchestrate development of the urethral tube and division of the embryonic cloaca through an autoregulatory loop with Shh10
Dynamic transcription regulation at the single-molecule level10
Multiple roles of Pax6 in postnatal cornea development10
An optimized QF-binary expression system for use in zebrafish10
Migratory patterns and evolutionary plasticity of cranial neural crest cells in ray-finned fishes10
A proteomics approach identifies novel resident zebrafish Balbiani body proteins Cirbpa and Cirbpb10
Synthetic by design: Exploiting tissue self-organization to explore early human embryology10
Integrin α5 and Integrin α4 cooperate to promote endocardial differentiation and heart morphogenesis10
Zfh-2 facilitates Notch-induced apoptosis in the CNS and appendages of Drosophila melanogaster10
Shedding light into the black box: Advances in in vitro systems for studying implantation10
Immunoglobulin superfamily receptor Junctional adhesion molecule 3 (Jam3) requirement for melanophore survival and patterning during formation of zebrafish stripes10
Long-lived zebrafish Rohon-Beard cells10
Chromatin remodeler CHD7 is critical for cochlear morphogenesis and neurosensory patterning10
Role of cell competition in ageing10
Dynamic optima in cell sizes during early development enable normal gastrulation in zebrafish embryos10
Orchestration of the distinct morphogenetic movements in different tissues drives tail regression during ascidian metamorphosis10
BMP signalling is required for extra-embryonic ectoderm development during pre-to-post-implantation transition of the mouse embryo10
Natural genetic engineering: A programmed chromosome/DNA elimination10
The Hox protein conundrum: The “specifics” of DNA binding for Hox proteins and their partners10
Effects of aging on urinary tract epithelial homeostasis and immunity10
Anomalous incisor morphology indicates tissue-specific roles for Tfap2a and Tfap2b in tooth development10
In silico analysis of inner ear development using public whole embryonic body single-cell RNA-sequencing data10
Conservation as well as divergence in Mcidas function underlies the differentiation of multiciliated cells in vertebrates10
Dally-like protein sequesters multiple Wnt ligands in the Drosophila germarium9
Urp1 and Urp2 act redundantly to maintain spine shape in zebrafish larvae9
A novel gene trap line for visualization and manipulation of erbb3b+ neural crest and glial cells in zebrafish9
Localized translation on the mitotic apparatus: A history and perspective9
YAP/TAZ maintain the proliferative capacity and structural organization of radial glial cells during brain development9
GCN5 acetylation is required for craniofacial chondrocyte maturation9
ETS factors are required but not sufficient for specific patterns of enhancer activity in different endothelial subtypes9
Reconstructing the evolutionary history of the oxytocin and vasotocin receptor gene family: Insights on whole genome duplication scenarios9
Desert hedgehog-primary cilia cross talk shapes mitral valve tissue by organizing smooth muscle actin9
The diversity of invertebrate visual opsins spanning Protostomia, Deuterostomia, and Cnidaria9
Scribble mutation disrupts convergent extension and apical constriction during mammalian neural tube closure9
Basal epidermis collective migration and local Sonic hedgehog signaling promote skeletal branching morphogenesis in zebrafish fins9
Nervous system and tissue polarity dynamically adapt to new morphologies in planaria9
Zebrafish mutants in vegfab can affect endothelial cell proliferation without altering ERK phosphorylation and are phenocopied by loss of PI3K signaling9
Hormone-related genes heterochronically and modularly regulate neotenic differentiation in termites9
The nephric mesenchyme lineage of intermediate mesoderm is derived from Tbx6-expressing derivatives of neuro-mesodermal progenitors via BMP-dependent Osr1 function9
The conserved alternative splicing factor caper regulates neuromuscular phenotypes during development and aging9
Autophagy induction in tumor surrounding cells promotes tumor growth in adult Drosophila intestines9
Loss of Smad4 in the scleraxis cell lineage results in postnatal joint contracture9
A comprehensive in vivo screen for anti-apoptotic miRNAs indicates broad capacities for oncogenic synergy9
An efficient miRNA knockout approach using CRISPR-Cas9 in Xenopus8
A role for sustained MAPK activity in the mouse ventral telencephalon8
Microtubule organization of vertebrate sensory neurons in vivo8
Asymmetric organelle positioning during epithelial polarization of C. elegans intestinal cells8
Evolutionary conservation of maternal RNA localization in fishes and amphibians revealed by TOMO-Seq8
An enhancer located in a Pde6c intron drives transient expression in the cone photoreceptors of developing mouse and human retinas8
Keratin 13 deficiency causes white sponge nevus in mice8
Microtubule polarity is instructive for many aspects of neuronal polarity8
Cardiomyocyte heterogeneity during zebrafish development and regeneration8
The embryonic origin of primordial germ cells in the tardigrade Hypsibius exemplaris8
Deletion of the Dishevelled family of genes disrupts anterior-posterior axis specification and selectively prevents mesoderm differentiation8
Tie1 regulates zebrafish cardiac morphogenesis through Tolloid-like 1 expression8
The axonemal dynein heavy chain 10 gene is essential for monocilia motility and spine alignment in zebrafish8
Temporospatial regulation of intraflagellar transport is required for the endochondral ossification in mice8
Cell culture system to assay candidate genes and molecular pathways implicated in congenital diaphragmatic hernias8
Diacylglycerol, PKC and MAPK signaling initiate tubeworm metamorphosis in response to bacteria8
IMPDH forms the cytoophidium in zebrafish8
microRNA-31 regulates skeletogenesis by direct suppression of Eve and Wnt18
Optimizing CRISPR/Cas9-based gene manipulation in echinoderms8
Lymphatic endothelial cell fate specification in the mammalian embryo: An historical perspective8
A single-cell RNA-seq analysis of Brachyury-expressing cell clusters suggests a morphogenesis-associated signal center of oral ectoderm in sea urchin embryos8
Wound repair in sea urchin larvae involves pigment cells and blastocoelar cells8
The role of cell lineage in the development of neuronal circuitry and function8
Anterior lateral plate mesoderm gives rise to multiple tissues and requires tbx5a function in left-right asymmetry, migration dynamics, and cell specification of late-addition cardiac cells8
Digit specific denervation does not inhibit mouse digit tip regeneration8
The function of the axon initial segment in neuronal polarity8
A fishy tail: Insights into the cell and molecular biology of neuromesodermal cells from zebrafish embryos8
Coup-TF: A maternal factor essential for differentiation along the embryonic axes in the sea urchin Paracentrotus lividus8
Spatio-temporal immunolocalization of VEGF-A, Runx2, and osterix during the early steps of intramembranous ossification of the alveolar process in rat embryos8
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