Developmental Biology

Papers
(The TQCC of Developmental Biology is 7. The table below lists those papers that are above that threshold based on CrossRef citation counts [max. 250 papers]. The publications cover those that have been published in the past four years, i.e., from 2020-11-01 to 2024-11-01.)
ArticleCitations
YAP1 and its fusion proteins in cancer initiation, progression and therapeutic resistance84
Human gastrulation: The embryo and its models41
Cell competition: A historical perspective40
Modeling human embryo development with embryonic and extra-embryonic stem cells39
The developmental biology of kinesins34
Seeing stars: Development and function of retinal astrocytes32
Postembryonic screen for mutations affecting spine development in zebrafish29
A developmental perspective on the evolution of the nervous system29
Vitamin A1/A2 chromophore exchange: Its role in spectral tuning and visual plasticity29
The role of cnidarian developmental biology in unraveling axis formation and Wnt signaling29
Vascular deficiencies in renal organoids and ex vivo kidney organogenesis27
Evolution of organoid technology: Lessons learnt in Co-Culture systems from developmental biology27
Conserved and context-dependent roles for pdgfrb signaling during zebrafish vascular mural cell development27
Gastruloids: Pluripotent stem cell models of mammalian gastrulation and embryo engineering27
Mechanisms of vitamin A metabolism and deficiency in the mammalian and fly visual system27
Neural crest metabolism: At the crossroads of development and disease26
The (unusual) heuristic value of Hox gene clusters; a matter of time?26
Cell competition-induced apical elimination of transformed cells, EDAC, orchestrates the cellular homeostasis26
VEGF signaling activates the matrix metalloproteinases, MmpL7 and MmpL5 at the sites of active skeletal growth and MmpL7 regulates skeletal elongation26
Development and maintenance of vision’s first synapse26
Identification of novel human Wnt target genes using adult endodermal tissue-derived organoids26
Retinoic acid signaling restricts the size of the first heart field within the anterior lateral plate mesoderm25
The evolutionary history and spectral tuning of vertebrate visual opsins24
Wnt signaling determines body axis polarity in regenerating Hydra tissue fragments24
Lamellipodia-like protrusions and focal adhesions contribute to collective cell migration in zebrafish24
Shark and ray genomics for disentangling their morphological diversity and vertebrate evolution24
Developmental basis of trachea-esophageal birth defects23
A systematic, label-free method for identifying RNA-associated proteins in vivo provides insights into vertebrate ciliary beating machinery23
A single-cell guide to retinal development: Cell fate decisions of multipotent retinal progenitors in scRNA-seq23
Conditional gene knockdowns in sea urchins using caged morpholinos23
MicroRNA-21 is involved in oocyte maturation, blastocyst formation, and pre-implantation embryo development23
The role of Xenopus developmental biology in unraveling Wnt signalling and antero-posterior axis formation23
Build me up optic cup: Intrinsic and extrinsic mechanisms of vertebrate eye morphogenesis23
There and back again: The mechanisms of differentiation and transdifferentiation in Drosophila blood cells22
Human neural organoids: Models for developmental neurobiology and disease21
The unfolding of the Hippo signaling pathway21
Development and diversification of bipolar interneurons in the mammalian retina21
A brief history of the segmentation clock21
Wnt/β-catenin signaling acts cell-autonomously to promote cardiomyocyte regeneration in the zebrafish heart21
Balancing energy expenditure and storage with growth and biosynthesis during Drosophila development20
Hexagonal patterning of the Drosophila eye20
Molecular detection of maturation stages in the developing kidney20
Trim-Away mediated knock down uncovers a new function for Lbh during gastrulation of Xenopus laevis.20
Evo-Devo of Urbilateria and its larval forms19
Fish models for investigating nutritional regulation of embryonic development19
Transcriptional and epigenetic control of hematopoietic stem cell fate decisions in vertebrates19
Temporal single-cell transcriptomes of zebrafish spinal cord pMN progenitors reveal distinct neuronal and glial progenitor populations19
Developmental plasticity and the response to nutrient stress in Caenorhabditis elegans19
CRISPR-Cas9 editing of non-coding genomic loci as a means of controlling gene expression in the sea urchin19
Epigenetic regulation of drosophila germline stem cell maintenance and differentiation19
OFCD syndrome and extraembryonic defects are revealed by conditional mutation of the Polycomb-group repressive complex 1.1 (PRC1.1) gene BCOR18
Modeling mammalian trunk development in a dish18
The FGF-AKT pathway is necessary for cardiomyocyte survival for heart regeneration in zebrafish18
Diverse cellular origins of adult blood vascular endothelial cells18
Human retinal model systems: Strengths, weaknesses, and future directions18
Nucleoporin NUP205 plays a critical role in cilia and congenital disease18
Wnt/β-catenin signaling pathway regulates cell proliferation but not muscle dedifferentiation nor apoptosis during sea cucumber intestinal regeneration18
The actin polymerization factor Diaphanous and the actin severing protein Flightless I collaborate to regulate sarcomere size17
Multiple roles for Pax2 in the embryonic mouse eye17
A conserved role for arrow in posterior axis patterning across Arthropoda16
Progenitors in prostate development and disease16
The great small organisms of developmental genetics: Caenorhabditis elegans and Drosophila melanogaster16
Development of the vertebrate retinal direction-selective circuit16
Cell shape changes during larval body plan development in Clytia hemisphaerica15
Returning to kidney development to deliver synthetic kidneys15
Single-cell transcriptomics in the Drosophila visual system: Advances and perspectives on cell identity regulation, connectivity, and neuronal diversity evolution15
CBP/p300 homologs CBP2 and CBP3 play distinct roles in planarian stem cell function15
An exciting period of Drosophila developmental biology: Of imaginal discs, clones, compartments, parasegments and homeotic genes15
Mouse models to study the pathophysiology of combined methylmalonic acidemia and homocystinuria, cblC type15
CREB-binding protein (CBP) gene family regulates planarian survival and stem cell differentiation15
Hif1α and Wnt are required for posterior gene expression during Xenopus tropicalis tail regeneration15
The role of mechanosensor Piezo1 in bone homeostasis and mechanobiology15
Nutrient availability contributes to a graded refractory period for regeneration in Xenopus tropicalis15
A conserved node in the regulation of Vasa between an induced and an inherited program of primordial germ cell specification15
Drosophila E93 promotes adult development and suppresses larval responses to ecdysone during metamorphosis14
Effects of aging on urinary tract epithelial homeostasis and immunity14
Transcriptional mechanisms of motor neuron development in vertebrates and invertebrates14
Mcrs1 interacts with Six1 to influence early craniofacial and otic development14
Reassembling gastrulation14
Transcriptional profiling from whole embryos to single neuroblast lineages in Drosophila14
Rethinking embryology in vitro: A synergy between engineering, data science and theory14
Temperature-Induced uncoupling of cell cycle regulators14
The forkhead factor Foxl2 participates in the ovarian differentiation of Chinese soft-shelled turtle Pelodiscus sinensis14
Mechanosignaling in vertebrate development13
The role of glucose in physiological and pathological heart formation13
Essential function and targets of BMP signaling during midbrain neural crest delamination13
Stressful development: integrating endoderm development, stress, and longevity13
Reflections on the past, present and future of developmental biology13
Leucine zipper transcription factor-like 1 (LZTFL1), an intraflagellar transporter protein 27 (IFT27) associated protein, is required for normal sperm function and male fertility12
Development and patterning of rib primordia are dependent on associated musculature12
Non-coding RNAs repressive role in post-transcriptional processing of RUNX2 during the acquisition of the osteogenic phenotype of periodontal ligament mesenchymal stem cells12
Physiological electric fields induce directional migration of mammalian cranial neural crest cells12
Inferring temporal organization of postembryonic development from high-content behavioral tracking12
A proteomics approach identifies novel resident zebrafish Balbiani body proteins Cirbpa and Cirbpb12
Role of BMP signaling during early development of the annelid Capitella teleta12
Basal epidermis collective migration and local Sonic hedgehog signaling promote skeletal branching morphogenesis in zebrafish fins12
Is zebrafish heart regeneration “complete”? Lineage-restricted cardiomyocytes proliferate to pre-injury numbers but some fail to differentiate in fibrotic hearts12
Thyroid hormone regulates abrupt skin morphogenesis during zebrafish postembryonic development12
Temporal cell fate determination in the spinal cord is mediated by the duration of Notch signalling11
Zebrafish mutants in vegfab can affect endothelial cell proliferation without altering ERK phosphorylation and are phenocopied by loss of PI3K signaling11
A comprehensive in vivo screen for anti-apoptotic miRNAs indicates broad capacities for oncogenic synergy11
A single-cell RNA-seq analysis of Brachyury-expressing cell clusters suggests a morphogenesis-associated signal center of oral ectoderm in sea urchin embryos11
Immunoglobulin superfamily receptor Junctional adhesion molecule 3 (Jam3) requirement for melanophore survival and patterning during formation of zebrafish stripes11
Migratory patterns and evolutionary plasticity of cranial neural crest cells in ray-finned fishes11
Semper's cells in the insect compound eye: Insights into ocular form and function11
Mef2c factors are required for early but not late addition of cardiomyocytes to the ventricle11
The Hox protein conundrum: The “specifics” of DNA binding for Hox proteins and their partners11
Anomalous incisor morphology indicates tissue-specific roles for Tfap2a and Tfap2b in tooth development11
Urp1 and Urp2 act redundantly to maintain spine shape in zebrafish larvae10
Zfh-2 facilitates Notch-induced apoptosis in the CNS and appendages of Drosophila melanogaster10
The axonemal dynein heavy chain 10 gene is essential for monocilia motility and spine alignment in zebrafish10
Dynamic transcription regulation at the single-molecule level10
Natural genetic engineering: A programmed chromosome/DNA elimination10
The function of the axon initial segment in neuronal polarity10
Role of cell competition in ageing10
Hormone-related genes heterochronically and modularly regulate neotenic differentiation in termites10
BMP signalling is required for extra-embryonic ectoderm development during pre-to-post-implantation transition of the mouse embryo10
Microtubule organization of vertebrate sensory neurons in vivo10
Loss of Smad4 in the scleraxis cell lineage results in postnatal joint contracture10
Tie1 regulates zebrafish cardiac morphogenesis through Tolloid-like 1 expression10
Chromatin remodeler CHD7 is critical for cochlear morphogenesis and neurosensory patterning10
In silico analysis of inner ear development using public whole embryonic body single-cell RNA-sequencing data10
Dynamic optima in cell sizes during early development enable normal gastrulation in zebrafish embryos10
Localized translation on the mitotic apparatus: A history and perspective10
Digit specific denervation does not inhibit mouse digit tip regeneration10
E-liquids and vanillin flavoring disrupts retinoic acid signaling and causes craniofacial defects in Xenopus embryos10
YAP/TAZ maintain the proliferative capacity and structural organization of radial glial cells during brain development10
Multiple roles of Pax6 in postnatal cornea development10
Zebrafish her3 knockout impacts developmental and cancer-related gene signatures10
Synthetic by design: Exploiting tissue self-organization to explore early human embryology10
Scribble mutation disrupts convergent extension and apical constriction during mammalian neural tube closure9
A role for sustained MAPK activity in the mouse ventral telencephalon9
Optimizing CRISPR/Cas9-based gene manipulation in echinoderms9
Reconstructing the evolutionary history of the oxytocin and vasotocin receptor gene family: Insights on whole genome duplication scenarios9
HAND transcription factors cooperatively specify the aorta and pulmonary trunk9
The dynamics of morphogenesis in stem cell-based embryology: Novel insights for symmetry breaking9
Wound repair in sea urchin larvae involves pigment cells and blastocoelar cells9
Nervous system and tissue polarity dynamically adapt to new morphologies in planaria9
A fishy tail: Insights into the cell and molecular biology of neuromesodermal cells from zebrafish embryos9
microRNA-31 regulates skeletogenesis by direct suppression of Eve and Wnt19
A novel gene trap line for visualization and manipulation of erbb3b+ neural crest and glial cells in zebrafish9
The diversity of invertebrate visual opsins spanning Protostomia, Deuterostomia, and Cnidaria9
Autophagy induction in tumor surrounding cells promotes tumor growth in adult Drosophila intestines9
ETS factors are required but not sufficient for specific patterns of enhancer activity in different endothelial subtypes9
Microtubule polarity is instructive for many aspects of neuronal polarity9
The conserved alternative splicing factor caper regulates neuromuscular phenotypes during development and aging9
The nephric mesenchyme lineage of intermediate mesoderm is derived from Tbx6-expressing derivatives of neuro-mesodermal progenitors via BMP-dependent Osr1 function9
Spatio-temporal immunolocalization of VEGF-A, Runx2, and osterix during the early steps of intramembranous ossification of the alveolar process in rat embryos8
The embryonic origin of primordial germ cells in the tardigrade Hypsibius exemplaris8
Non-targeted lipidomics and transcriptomics analysis reveal the molecular underpinnings of mandibular gland development in Apis mellifera ligustica8
Asymmetric organelle positioning during epithelial polarization of C. elegans intestinal cells8
The exocyst complex is required for developmental and regenerative neurite growth in vivo8
The role of cell lineage in the development of neuronal circuitry and function8
IMPDH forms the cytoophidium in zebrafish8
Diacylglycerol, PKC and MAPK signaling initiate tubeworm metamorphosis in response to bacteria8
Human lung organoid: Models for respiratory biology and diseases8
Principles of microtubule polarity in linear cells8
Cdc42 has important roles in postnatal angiogenesis and vasculature formation8
Patterning of cartilaginous condensations in the developing facial skeleton8
An efficient miRNA knockout approach using CRISPR-Cas9 in Xenopus8
Anterior lateral plate mesoderm gives rise to multiple tissues and requires tbx5a function in left-right asymmetry, migration dynamics, and cell specification of late-addition cardiac cells8
Temporospatial regulation of intraflagellar transport is required for the endochondral ossification in mice8
Unifying synthetic embryology8
Cell culture system to assay candidate genes and molecular pathways implicated in congenital diaphragmatic hernias8
A role for Cep70 in centriole amplification in multiciliated cells8
High-throughput methodology to identify CRISPR-generated Danio rerio mutants using fragment analysis with unmodified PCR products8
Cardiomyocyte heterogeneity during zebrafish development and regeneration8
Dysregulated BMP signaling through ACVR1 impairs digit joint development in fibrodysplasia ossificans progressiva (FOP)8
Sox10-cre BAC transgenes reveal temporal restriction of mesenchymal cranial neural crest and identify glandular Sox10 expression8
Lymphatic endothelial cell fate specification in the mammalian embryo: An historical perspective8
Dendrite regeneration in the vertebrate spinal cord8
Keratin 13 deficiency causes white sponge nevus in mice8
A reverse genetic approach in geckos with the CRISPR/Cas9 system by oocyte microinjection8
Profiling NSD3-dependent neural crest gene expression reveals known and novel candidate regulatory factors8
Evolutionary conservation of maternal RNA localization in fishes and amphibians revealed by TOMO-Seq8
An enhancer located in a Pde6c intron drives transient expression in the cone photoreceptors of developing mouse and human retinas8
Coup-TF: A maternal factor essential for differentiation along the embryonic axes in the sea urchin Paracentrotus lividus8
Gene regulatory divergence amongst echinoderms underlies appearance of pigment cells in sea urchin development8
Nociceptor subtypes are born continuously over DRG development7
Molecular mechanisms of hearing loss in Nager syndrome7
Tbx15/18/22 shares a binding site with Tbx6-r.b to maintain expression of a muscle structural gene in ascidian late embryos7
Spatiotemporal mapping of sensory and motor innervation of the embryonic and postnatal mouse urinary bladder7
Cyclin D1 gene expression is essential for cell cycle progression from the maternal-to-zygotic transition during blastoderm development in Japanese quail7
Iron overload during the embryonic period develops hyperactive like behavior and dysregulation of biogenic amines in Drosophila melanogaster7
Polychrome labeling reveals skeletal triradiate and elongation dynamics and abnormalities in patterning cue-perturbed embryos7
Lfng and Dll3 cooperate to modulate protein interactions in cis and coordinate oscillatory Notch pathway activation in the segmentation clock7
Interplay between sex determination cascade and major signaling pathways during Drosophila eye development: Perspectives for future research7
Alterations in the spatiotemporal expression of the chemokine receptor CXCR4 in endothelial cells cause failure of hierarchical vascular branching7
Misregulation of cell adhesion molecules in the Ciona neural tube closure mutant bugeye7
Arid1a regulates bladder urothelium formation and maintenance7
microRNA-124 directly suppresses Nodal and Notch to regulate mesodermal development7
Brain endothelial cells acquire blood-brain barrier properties in the absence of Vegf-dependent CNS angiogenesis7
Spatiotemporal transcriptional dynamics of the cycling mouse oviduct7
Expanding the boundaries of synthetic development7
Metabolic regulation of cell competition7
Distinct Frizzled receptors independently mediate endomesoderm specification and primary archenteron invagination during gastrulation in Nematostella7
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