Development Growth & Differentiation

Article	Citations
Wnt/β‐catenin signaling: Structure, assembly and endocytosis of the signalosome	36
Stem‐cell‐based therapies for retinal degenerative diseases: Current challenges in the establishment of new treatment strategies	27
Human liver model systems in a dish	18
Evolution of wing pigmentation in Drosophila: Diversity, physiological regulation, and cis‐regulatory evolution	17
Gene regulatory landscape of the sonic hedgehog locus in embryonic development	16
In vitro systems: A new window to the segmentation clock	16
Morphogenetic mechanisms forming the notochord rod: The turgor pressure‐sheath strength model	14
Development of pluripotent stem cell‐based human tenocytes	13
Neural induction: Historical views and application to pluripotent stem cells	12
A genome database for a Japanese population of the larvacean Oikopleura dioica	12
GONAD: A new method for germline genome editing in mice and rats	11
Pluripotent stem cells for the study of early human embryology	11
The TRP channel PKD2 is involved in sensing the mechanical stimulus of adhesion for initiating metamorphosis in the chordate Ciona	11
CRISPR/Cas9 nickase‐mediated efficient and seamless knock‐in of lethal genes in the medaka fish Oryzias latipes	11
Hypothalamic–pituitary organoid generation through the recapitulation of organogenesis	10
Modeling neurodevelopment in a dish with pluripotent stem cells	10
The regulatory landscape of the Dlx gene system in branchial arches: Shared characteristics among Dlx bigene clusters and evolution	10
The many faces of Sox2 function in neural crest development	9
Diverse sensory cues for individual recognition	9
Recent progress of animal transplantation studies for treating articular cartilage damage using pluripotent stem cells	9
In vivo imaging of neural circuit formation in the neonatal mouse barrel cortex	9
Genetic variation analyses indicate conserved SARS‐CoV‐2–host interaction and varied genetic adaptation in immune response factors in modern human evolution	9
Dynein assembly factor with WD repeat domains 1 (DAW1) is required for the function of motile cilia in the planarian Schmidtea mediterranea	9
The many faces of the E3 ubiquitin ligase, RNF220, in neural development and beyond	9
Heat shock cognate 70 genes contribute to Drosophila spermatocyte growth progression possibly through the insulin signaling pathway	8

A population of neurons that produce hugin and express the diuretic hormone 44 receptor gene projects to the corpora allata in Drosophila melanogaster	8
A modified Tet‐ON system minimizing leaky expression for cell‐type specific gene induction in medaka fish	8
What is the role of PIWI family proteins in adult pluripotent stem cells? Insights from asexually reproducing animals, planarians	8
Kidney organoids: Research in developmental biology and emerging applications	8
Developmental constraints on fin diversity	8
How do signaling and transcription factors regulate both axis elongation and Hox gene expression along the anteroposterior axis?	7
Spatial organization and transitions of spontaneous neuronal activities in the developing sensory cortex	7
Identification and characterization of a fibroblast growth factor gene in the planarian Dugesia japonica	7
Synthetic embryology: Early mammalian embryo modeling systems from cell cultures	7
Modeling early stages of endoderm development in epiblast stem cell aggregates with supply of extracellular matrices	6
Efficient visual screening of CRISPR/Cas9 genome editing in the nematode Pristionchus pacificus	6
Rewiring of chromatin state and gene expression by transposable elements	6
Establishment of culture and microinjection methods for false clownfish embryos without parental care	6
Polycomb group RING finger protein 5 influences several developmental signaling pathways during the in vitro differentiation of mouse embryonic stem cells	5
TrBase: A genome and transcriptome database of Temnopleurus reevesii	5
Crosstalk between the mTOR and Hippo pathways	5
Plant secondary cell wall proteome analysis with an inducible system for xylem vessel cell differentiation	5
The evolutionary origin of developmental enhancers in vertebrates: Insights from non‐model species	5
In vivo wide‐field voltage imaging in zebrafish with voltage‐sensitive dye and genetically encoded voltage indicator	5
Optimization of CRISPR/Cas9‐mediated gene disruption in Xenopus laevis using a phenotypic image analysis technique	5
Contribution of sox9b to pigment cell formation in medaka fish	5
Temnopleurus reevesii as a new sea urchin model in genetics	5
Light‐sheet microscopy‐based 3D single‐cell tracking reveals a correlation between cell cycle and the start of endoderm cell internalization in early zebrafish development	5
Development of platelet replacement therapy using human induced pluripotent stem cells	5
Point mutagenesis in mouse reveals contrasting pathogenetic effects between MEN2B‐ and Hirschsprung disease‐associated missense mutations of the RET gene	5
A rapid segmentation method of cell boundary for developing embryos using machine learning with a personal computer	4
Prime editing in chicken fibroblasts and primordial germ cells	4
Cell sorting and germ layer formation in reconstructed starfish embryos	4
Enhancer evolution in chordates: Lessons from functional analyses of cephalochordate cis‐regulatory modules	4
The origin of life: RNA and protein co‐evolution on the ancient Earth	4
An improved iliac lymph node method for production of monoclonal antibodies	4
Formation of a multi‐layered 3‐dimensional structure of the heterochromatin compartment during early mammalian development	4
A role of Hey2 transcription factor for right ventricle development through regulation of Tbx2‐Mycn pathway during cardiac morphogenesis	4
Regulation of genes for ubiquitination and SUMO‐specific protease involved in larval development of the silkworm, Bombyx mori	4
Emerging evidence for cell‐autonomous axon guidance	4
A small Rho GTPase OsRacB is required for pollen germination in rice	4
Quantification of planarian behaviors	4
Epigenomic dynamics of early Xenopus Embryos	4
Reemployment of Kupffer’s vesicle cells into axial and paraxial mesoderm via transdifferentiation	4
ccr7 affects both morphogenesis and differentiation during early Xenopus embryogenesis	3
Pluripotent stem cells in developmental biology	3
Pluripotent stem cells in the research for extraembryonic cell differentiation	3
Newly raised anti‐c‐Kit antibody visualizes morphology of interstitial cells of Cajal in the developing gut of chicken embryos	3
Combined method of whole mount and block‐face imaging: Acquisition of 3D data of gene expression pattern from conventional in situ hybridization	3
Migratory regulation by MTA homologous genes is essential for the uniform distribution of planarian adult pluripotent stem cells	3
Quantitative analysis of the roles of IRM cell adhesion molecules in column formation in the fly brain	3
Intravital staining to detect mineralization in Xenopus tropicalis during and after metamorphosis	3
Mosaic gene expression analysis of semaphorin–plexin interactions in Caenorhabditis elegans using the IR‐LEGO single‐cell gene induction system	3
Expression of the core promoter factors TATA box binding protein and TATA box binding protein‐related factor 2 in Drosophila germ cells and their distinct functions in germline development	3
Invention sharing is the mother of developmental biology	3

Plastic brain structure changes associated with the division of labor and aging in termites	3
Preparation of three‐notochord explants for imaging analysis of the cell movements of convergent extension during early Xenopus morphogenesis	3
An easy and rapid staining method for confocal microscopic observation and reconstruction of three‐dimensional images of echinoderm larvae and juveniles	3
Sperm associated antigen 7 is activated by T3 during Xenopus tropicalis metamorphosis via a thyroid hormone response element within the first intron	3
The lipid‐binding START domain regulates the dimerization of ATML1 via modulating the ZIP motif activity in Arabidopsis thaliana	3
Evolutionary diversification of the canonical Wnt signaling effector TCF/LEF in chordates	3
Inducible and tissue‐specific cell labeling in Cre‐ERT2 transgenic Xenopus lines	2
Versatile utilities of amphibians (Part 3)	2
A geometrical perspective on development	2
Growth factor dependence of the proliferation and survival of cultured lacrimal gland epithelial cells isolated from late‐embryonic mice	2
The crucial role of CTCF in mitotic progression during early development of sea urchin	2
Diversity of cortical bone morphology in anuran amphibians	2
Component analysis of nucleolar protein compartments using Xenopus laevis oocytes	2
Step‐by‐step protocol for alternative injury models in newt cardiac regeneration	2
Cellular responses in the FGF10‐mediated improvement of hindlimb regenerative capacity in Xenopus laevis revealed by single‐cell transcriptomics	2
Ndst1, a heparan sulfate modification enzyme, regulates neuroectodermal patterning by enhancing Wnt signaling in Xenopus	2
Tracing the developmental origin of tissue stem cells	2
Differential contribution of nuclear size scaling mechanisms between Xenopus species	2
Live visualization of a functional RET‐EGFP chimeric receptor in homozygous knock‐in mice	2
The Rx transcription factor is required for determination of the retinal lineage and regulates the timing of neuronal differentiation	2
Discrete embryonic character variation uncovers hidden ecological adaptations in lacertid lizards	2
Superoxide dismutase C affects Dictyostelium contractile vacuole biogenesis and function	2
Step‐by‐step protocols for non‐viral derivation of transgene‐free induced pluripotent stem cells from somatic fibroblasts of multiple mammalian species	2
The homeodomain transcription factor Ventx2 regulates respiratory progenitor cell number and differentiation timing during Xenopus lung development	2
Highly rapid and diverse sex chromosome evolution in the Odorrana frog species complex	2
Digoxigenin‐labeled RNA probes for untranslated regions enable the isoform‐specific gene expression analysis of myosin heavy chains in whole‐mount in situ hybridization	2
Organ‐specific effects on target binding due to knockout of thyroid hormone receptor α during Xenopus metamorphosis	2
Developmental biology of the larvaceanOikopleura dioica: Genome resources, functional screening, and imaging	2
Emergent roles of maternal microchimerism in postnatal development	2
In vitro and in vivo gene transfer in the cloudy catshark Scyliorhinus torazame	2
The dopamine effect on sea urchin larvae depends on their age	2
Inhibitory synaptic transmission tuned by Ca2+ and glutamate through the control of GABAAR lateral diffusion dynamics	2
The rise of developmental biology in China	2
Versatile utilities of amphibians (part 2)	2
Involvement of Oct4‐type transcription factor Pou5f3 in posterior spinal cord formation in zebrafish embryos	2
Mechanistic insights into the evolution of the differential expression of tandemly arrayed cone opsin genes in zebrafish	2
Ex vivo expansion of primary cells from limb tissue of Pleurodeles waltl	2
Versatile Utilities of Amphibians (part 1)	2
Dynamic evolutionary history of spiralian‐specific TALE homeobox genes in mollusks	2
Back and forth: History of and new insights on the vertebrate lymphatic valve	2
Gene activation of metazoan Fox transcription factors at the onset of metamorphosis in the marine demosponge Amphimedon queenslandica	1
maea affects head formation through ß‐catenin degradation during early Xenopus laevis development	1
Effective enrichment of stem cells in regenerating Xenopus laevis tadpole tails using the side population method	1
Dysregulated TDP‐43 proteostasis perturbs excitability of spinal motor neurons during brainstem‐mediated fictive locomotion in zebrafish	1
Thyroid hormone‐dependent and independent processes of red blood cell transition from larval to adult type during metamorphosis in Xenopus laevis	1
Cell proliferation and neurogenesis in the adult telencephalon of the newt Cynops pyrrhogaster	1
Detection of hypoxia in the pulmonary tissues of Xenopus laevis over repeated dives	1
Characteristic tetraspanin expression patterns mark various tissues during early Xenopus development	1
Xenopus: An in vivo model for studying skin response to ultraviolet B irradiation	1
A myeloperoxidase enhancer drives myeloid cell‐specific labeling in a transgenic frog line	1
Dual TGFβ and Wnt inhibition promotes Mesp1‐mediated mouse pluripotent stem cell differentiation into functional cardiomyocytes	1
Can we model autism using zebrafish?	1
Involvement of strawberry notch homologue 1 in neurite outgrowth of cortical neurons	1
Osteological and histological comparison of the development of the interphalangeal intercalary skeletal element between hyloid and ranoid anurans	1
Establishment of a new method to isolate viable x‐ray‐sensitive cells from planarian by fluorescence‐activated cell sorting	1
The developmental hourglass model is applicable to the spinal cord based on single‐cell transcriptomes and non‐conserved cis‐regulatory elements	1
Appendage‐restricted gene induction using a heated agarose gel for studying regeneration in metamorphosed Xenopus laevis and Pleurodeles waltl	1
Optogenetic control of medaka behavior with channelrhodopsin	1
An Astyanax mexicanus mao knockout line uncovers the developmental roles of monoamine homeostasis in fish brain	1
A novel agonist for the HGF receptor MET promotes differentiation of human pluripotent stem cells into hepatocyte‐like cells	1
Generation of translucent Xenopus tropicalis through triple knockout of pigmentation genes	1
Involvement of the scalloped gene in morphogenesis of the wing margin via regulating cell growth in a hemimetabolous insect Gryllus bimaculatus	1
Establishment of neural stem cell culture from the central nervous system of the Iberian ribbed newt Pleurodeles waltl	1
Involvement of glucose in freeze tolerance in the Japanese tree frog Hyla japonica	1
Application of the RNA interference technique to Xenopus embryos: Specific reduction of the β‐catenin gene products by short double‐stranded RNA produced by recombinant human Dicer	1
Pluripotent stem cells in developmental biology (part 2)	1
Pcgf1 gene disruption reveals primary involvement of epigenetic mechanism in neuronal subtype specification in the enteric nervous system	1
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Simultaneous activation of genes encoding urea cycle enzymes and gluconeogenetic enzymes coincides with a corticosterone surge period before metamorphosis in Xenopus laevis	1
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Versatile utilities of amphibians (part 4)	1
Engagement of Foxh1 in chromatin regulation revealed by protein interactome analyses	1
Heparan sulfate proteoglycan molecules, syndecan and perlecan, have distinct roles in the maintenance of Drosophila germline stem cells	1
Appetizer on soft matter physics concepts in mechanobiology	1
Photoperiod‐independent testicular development in the model newt Pleurodeles waltl	1
An ImageJ‐based tool for three‐dimensional registration between different types of microscopic images	1
X‐ray micro‐computed tomography of Xenopus tadpole reveals changes in brain ventricular morphology during telencephalon regeneration	1
Daughter cells inherit YAP localization from mother cells in early preimplantation embryos	1
Individual differences in response to alcohol and nicotine in zebrafish: Gene expression and behavior	1
Light‐induced local gene expression in primary chick cell culture system	1

Enhancers, development, and evolution

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