Biometrics

Article	Citations
Assessing the goodness of fit of logistic regression models in large samples: A modification of the Hosmer‐Lemeshow test	73
Predictively consistent prior effective sample sizes	40
Statistical inference for association studies using electronic health records: handling both selection bias and outcome misclassification	31
Improving precision and power in randomized trials for COVID‐19 treatments using covariate adjustment, for binary, ordinal, and time‐to‐event outcomes	30
Nonparametric variable importance assessment using machine learning techniques	30
Estimation of incubation period and generation time based on observed length‐biased epidemic cohort with censoring for COVID‐19 outbreak in China	28
Testing small study effects in multivariate meta‐analysis	23
Elastic priors to dynamically borrow information from historical data in clinical trials	21
Repeated measures random forests (RMRF): Identifying factors associated with nocturnal hypoglycemia	20
Variance estimation in inverse probability weighted Cox models	20
Inferring UK COVID‐19 fatal infection trajectories from daily mortality data: Were infections already in decline before the UK lockdowns?	20
Zero‐inflated Poisson factor model with application to microbiome read counts	19
Analysis of noisy survival data with graphical proportional hazards measurement error models	18
Horseshoe‐based Bayesian nonparametric estimation of effective population size trajectories	15
Joint model for survival and multivariate sparse functional data with application to a study of Alzheimer's Disease	15
Spatial+: A novel approach to spatial confounding	15
A multiple robust propensity score method for longitudinal analysis with intermittent missing data	14
Efficient nonparametric inference on the effects of stochastic interventions under two‐phase sampling, with applications to vaccine efficacy trials	14
Improving Trial Generalizability Using Observational Studies	14
A class of proportional win‐fractions regression models for composite outcomes	14
A Bayesian adaptive phase I/II clinical trial design with late‐onset competing risk outcomes	14
Parametric g‐formula implementations for causal survival analyses	14
Semiparametric analysis of clustered interval‐censored survival data using soft Bayesian additive regression trees (SBART)	13
Causal inference in high dimensions: A marriage between Bayesian modeling and good frequentist properties	12
Bayesian multiple index models for environmental mixtures	12

Combining primary cohort data with external aggregate information without assuming comparability	12
Sample size formula for general win ratio analysis	12
Synthesizing external aggregated information in the presence of population heterogeneity: A penalized empirical likelihood approach	12
A pairwise pseudo‐likelihood approach for left‐truncated and interval‐censored data under the Cox model	12
Causal mediation of semicompeting risks	11
Post‐selection inference for changepoint detection algorithms with application to copy number variation data	11
Two‐stage penalized regression screening to detect biomarker–treatment interactions in randomized clinical trials	11
Approval policies for modifications to machine learning‐based software as a medical device: A study of bio‐creep	11
Compositional knockoff filter for high‐dimensional regression analysis of microbiome data	11
A linear noise approximation for stochastic epidemic models fit to partially observed incidence counts	11
A marginal moment matching approach for fitting endemic‐epidemic models to underreported disease surveillance counts	11
On restricted mean time in favor of treatment	10
A generalized robust allele‐based genetic association test	10
Regularized matrix data clustering and its application to image analysis	10
A stacked approach for chained equations multiple imputation incorporating the substantive model	10
Spatial factor modeling: A Bayesian matrix‐normal approach for misaligned data	10
Nonparametric estimation of Spearman's rank correlation with bivariate survival data	9
Sample size considerations for stepped wedge designs with subclusters	9
A multiview model for relative and absolute microbial abundances	9
Multimodal neuroimaging data integration and pathway analysis	9
The impact of misclassification on covariate‐adaptive randomized clinical trials	9
A Novel Penalized Inverse-Variance Weighted Estimator for Mendelian Randomization with Applications to COVID-19 Outcomes	9
Generalized reliability based on distances	9
Modeling sparse longitudinal data on Riemannian manifolds	9
Supervised Two-Dimensional Functional Principal Component Analysis with Time-to-Event Outcomes and Mammogram Imaging Data	8
Nonparametric matrix response regression with application to brain imaging data analysis	8
Sensitivity analyses informed by tests for bias in observational studies	8
Nonlinear mediation analysis with high‐dimensional mediators whose causal structure is unknown	8
Receiver operating characteristic curves and confidence bands for support vector machines	8
Neural Networks for Clustered and Longitudinal Data Using Mixed Effects Models	8
Bayesian group selection in logistic regression with application to MRI data analysis	8
Bayesian inference of causal effects from observational data in Gaussian graphical models	8
Interactive web‐based data visualization with R, plotly, and shiny (Carson Sievert)	8
Restricted mean survival time as a function of restriction time	8
Quantifying direct and indirect effect for longitudinal mediator and survival outcome using joint modeling approach	8
Improving inference for nonlinear state‐space models of animal population dynamics given biased sequential life stage data	7
Bayesian group sequential enrichment designs based on adaptive regression of response and survival time on baseline biomarkers	7
Bayesian compositional regression with structured priors for microbiome feature selection	7
A transformation‐free linear regression for compositional outcomes and predictors	7
Bayesian dose regimen assessment in early phase oncology incorporating pharmacokinetics and pharmacodynamics	7
Cluster non‐Gaussian functional data	7
Weak‐instrument robust tests in two‐sample summary‐data Mendelian randomization	7
Causal interaction trees: Finding subgroups with heterogeneous treatment effects in observational data	7
Multivariate survival analysis in big data: A divide‐and‐combine approach	7
Discussion on “Causal mediation of semicompeting risks” by Yen‐Tsung Huang	6
General Independent Censoring in Event-Driven Trials with Staggered Entry	6
Two robust tools for inference about causal effects with invalid instruments	6
A spatial Bayesian latent factor model for image‐on‐image regression	6
Joint association and classification analysis of multi‐view data	6
Resampling‐based confidence intervals for model‐free robust inference on optimal treatment regimes	6

DROID: Dose-Ranging Approach to Optimizing Dose in Oncology Drug Development	6
Rejoinder to “Assessing the goodness of fit of logistic regression models in large samples: A modification of the Hosmer‐Lemeshow test”	6
Discussion on “Nonparametric variable importance assessment using machine learning techniques” by Brian D. Williamson, Peter B. Gilbert, Marco Carone, and Noah Simon	6
Jackknife model averaging for high‐dimensional quantile regression	6
Analysis of clustered interval‐censored data using a class of semiparametric partly linear frailty transformation models	6
Upper bound estimators of the population size based on ordinal models for capture‐recapture experiments	6
Simultaneous variable selection in regression analysis of multivariate interval‐censored data	6
Histopathological imaging‐based cancer heterogeneity analysis via penalized fusion with model averaging	6
Gaussian graphical model‐based heterogeneity analysis via penalized fusion	6
Cross‐component registration for multivariate functional data, with application to growth curves	6
A linear mixed model to estimate COVID‐19‐induced excess mortality	6
The Generalized Fisher's Combination and Accurate P-Value Calculation under Dependence	5
Extracting brain disease‐related connectome subgraphs by adaptive dense subgraph discovery	5
Bridging preference‐based instrumental variable studies and cluster‐randomized encouragement experiments: Study design, noncompliance, and average cluster effect ratio	5
Restricted function‐on‐function linear regression model	5
Design‐based properties of the nearest neighbor spatial interpolator and its bootstrap mean squared error estimator	5
Weighted regression analysis to correct for informative monitoring times and confounders in longitudinal studies	5
SMIM: A unified framework of survival sensitivity analysis using multiple imputation and martingale	5
Elastic Analysis of Irregularly or Sparsely Sampled Curves	5
Information‐incorporated Gaussian graphical model for gene expression data	5
Approximate Bayesian inference for case‐crossover models	5
Semiparametric estimation of cross‐covariance functions for multivariate random fields	5
Bayesian Treatment Screening and Selection Using Subgroup-Specific Utilities of Response and Toxicity	5
CASANOVA: Permutation inference in factorial survival designs	5
Clustering High-Dimensional Data via Feature Selection	5
Instrumental variable estimation of complier causal treatment effect with interval‐censored data	5
Testing for Heterogeneity in the Utility of a Surrogate Marker	5
Case contamination in electronic health records based case‐control studies	5
Estimation of separable direct and indirect effects in continuous time	5
Estimating the optimal individualized treatment rule from a cost‐effectiveness perspective	5
Penalized Estimation of Frailty-Based Illness–Death Models for Semi-Competing Risks	5
Simultaneous feature selection and outlier detection with optimality guarantees	5
Sparse linear discriminant analysis for multiview structured data	5
The Tukey trend test: Multiplicity adjustment using multiple marginal models	5
Adaptive enrichment designs with a continuous biomarker	5
Exploiting nonsystematic covariate monitoring to broaden the scope of evidence about the causal effects of adaptive treatment strategies	5
A latent capture history model for digital aerial surveys	5
A semiparametric model for between‐subject attributes: Applications to beta‐diversity of microbiome data	5
Nonparametric analysis of nonhomogeneous multistate processes with clustered observations	5
Power and sample size for observational studies of point exposure effects	5
Modelling publication bias and p‐hacking	5
Robust and efficient semi‐supervised estimation of average treatment effects with application to electronic health records data	4
Nonparametric estimation of the survival distribution under covariate‐induced dependent truncation	4
A Bayesian Model with Application for Adaptive Platform Trials Having Temporal Changes	4
Multidimensional molecular measurements–environment interaction analysis for disease outcomes	4
Simultaneous variable selection and estimation for joint models of longitudinal and failure time data with interval censoring	4
Evaluating multiple surrogate markers with censored data	4
Discussion of “Improving precision and power in randomized trials for COVID‐19 treatments using covariate adjustment, for binary, ordinal, and time‐to‐event outcomes”	4
Ultra high‐dimensional semiparametric longitudinal data analysis	4
Evaluating and improving a matched comparison of antidepressants and bone density	4
Flexible link functions in a joint hierarchical Gaussian process model	4
Joint calibrated estimation of inverse probability of treatment and censoring weights for marginal structural models	4
Joint penalized spline modeling of multivariate longitudinal data, with application to HIV‐1 RNA load levels and CD4 cell counts	4
Bayesian spatial homogeneity pursuit for survival data with an application to the SEER respiratory cancer data	4
Latent Ornstein‐Uhlenbeck models for Bayesian analysis of multivariate longitudinal categorical responses	4
Horvitz‐Thompson–like estimation with distance‐based detection probabilities for circular plot sampling of forests	4
Robust Bayesian Variable Selection for Gene–Environment Interactions	4
A Bayesian Multivariate Mixture Model for High Throughput Spatial Transcriptomics	4
Ultra-High Dimensional Variable Selection for Doubly Robust Causal Inference	4
Multiwave validation sampling for error‐prone electronic health records	4
Nonparametric Estimation of the Causal Effect of a Stochastic Threshold-Based Intervention	4
Stratified Cox models with time‐varying effects for national kidney transplant patients: A new blockwise steepest ascent method	4
Combining Observational and Experimental Datasets Using Shrinkage Estimators	4
WiSER: Robust and scalable estimation and inference of within‐subject variances from intensive longitudinal data	4
A Bayesian nonparametric approach for inferring drug combination effects on mental health in people with HIV	4
Estimating perinatal critical windows of susceptibility to environmental mixtures via structured Bayesian regression tree pairs	4
Global sensitivity analysis of randomized trials with nonmonotone missing binary outcomes: Application to studies of substance use disorders	4
Structural factor equation models for causal network construction via directed acyclic mixed graphs	4
Spatial correlation structures for detections of individuals in spatial capture–recapture models	4
Optimality of testing procedures for survival data in the nonproportional hazards setting	4
Evaluation of longitudinal surrogate markers	4
Joint modeling of zero‐inflated longitudinal proportions and time‐to‐event data with application to a gut microbiome study	4
Quantile regression for survival data with covariates subject to detection limits	4
Assessing Exposure-Time Treatment Effect Heterogeneity in Stepped-Wedge Cluster Randomized Trials	4
Discussion on “Assessing the goodness of fit of logistic regression models in large samples: A modification of the Hosmer‐Lemeshow test” by Giovanni Nattino, Michael L. Pennell, and Stanley Lemeshow	4
Generalized multi‐SNP mediation intersection–union test	4
Conditional Inference in Cis-Mendelian Randomization Using Weak Genetic Factors	4
Using the “Hidden” genome to improve classification of cancer types	4
Double Reduction Estimation and Equilibrium Tests in Natural Autopolyploid Populations	4
Automated Analysis of Low-Field Brain MRI in Cerebral Malaria	4

Discussion on “Approval policies for modifications to machine learning‐based software as a medical device: A study of bio‐creep” by Jean Feng, Scott Emerson, and Noah Simon	4
Penalized Fieller's confidence interval for the ratio of bivariate normal means	4
Cox regression model under dependent truncation	4
Utilizing stability criteria in choosing feature selection methods yields reproducible results in microbiome data	3
Nonparametric Inference of General While-Alive Estimands for Recurrent Events	3
Parameter estimation for discretely observed linear birth‐and‐death processes	3
Efficient and Robust Methods for Causally Interpretable Meta-Analysis: Transporting Inferences from Multiple Randomized Trials to a Target Population	3
Discussion on “Testing small study effects in multivariate meta‐analysis” by Chuan Hong, Georgia Salanti, Sally Morton, Richard Riley, Haitao Chu, Stephen E. Kimmel, and Yong Chen	3
Bayesian Sample Size Determination Using Commensurate Priors to Leverage Preexperimental Data	3
A Formal Causal Interpretation of the Case-Crossover Design	3
Discussion on “Causal mediation of semicompeting risks” by Yen‐Tsung Huang	3
New multivariate tests for assessing covariate balance in matched observational studies	3
Nonparametric trend estimation in functional time series with application to annual mortality rates	3
Prioritizing Candidate Peptides for Cancer Vaccines Through Predicting Peptide Presentation by HLA-I Proteins	3
Simultaneous confidence intervals for ranks with application to ranking institutions	3
Hierarchical cancer heterogeneity analysis based on histopathological imaging features	3
Two‐group Poisson‐Dirichlet mixtures for multiple testing	3
SAM: Self-Adapting Mixture Prior to Dynamically Borrow Information from Historical Data in Clinical Trials	3
A Joint Fairness Model with Applications to Risk Predictions for Underrepresented Populations	3
Model-Based Clustering of High-Dimensional Longitudinal Data via Regularization	3
Bivariate small‐area estimation for binary and gaussian variables based on a conditionally specified model	3
Identifying Alert Concentrations Using a Model-Based Bootstrap Approach	3
Power Analysis for Cluster Randomized Trials with Continuous Coprimary Endpoints	3
Retrospective versus prospective score tests for genetic association with case‐control data	3
Detecting the Spatial Clustering of Exposure–Response Relationships with Estimation Error: A Novel Spatial Scan Statistic	3
EMBRACE: An EM‐based bias reduction approach through Copas‐model estimation for quantifying the evidence of selective publishing in network meta‐analysis	3
Efficient odds ratio estimation under two‐phase sampling using error‐prone data from a multi‐national HIV research cohort	3
Simulation‐based estimators of analytically intractable causal effects	3
A matching procedure for sequential experiments that iteratively learns which covariates improve power	3
Robust Functional Principal Component Analysis via a Functional Pairwise Spatial Sign Operator	3
Structural Cumulative Survival Models for Estimation of Treatment Effects Accounting for Treatment Switching in Randomized Experiments	3
Continuous Time-Interaction Processes for Population Size Estimation, with an Application to Drug Dealing in Italy	3
Bayesian Inference for Stationary Points in Gaussian Process Regression Models for Event-Related Potentials Analysis	3
Design Considerations for Two-Stage Enrichment Clinical Trials	3
A kernel regression model for panel count data with nonparametric covariate functions	3
Integration of survival data from multiple studies	3
A closed max‐t test for multiple comparisons of areas under the ROC curve	3
Multikink Quantile Regression for Longitudinal Data with Application to Progesterone Data Analysis	3
Child mortality estimation incorporating summary birth history data	3
Improving efficiency of inference in clinical trials with external control data	3
Simultaneous estimation of cluster number and feature sparsity in high‐dimensional cluster analysis	3
Another look at regression analysis using ranked set samples with application to an osteoporosis study	3
Spatial regression and spillover effects in cluster randomized trials with count outcomes	3
Meta‐analysis: Methods for health and experimental studies: ShahjahanKhanSpringerNature Singapore Pte. Ltd. 2020. pp. 293	3
It's All Relative: Regression Analysis with Compositional Predictors	3
Brain connectivity alteration detection via matrix‐variate differential network model	3
Integrating sample similarities into latent class analysis: a tree‐structured shrinkage approach	3
Flexible use of copula‐type model for dose‐finding in drug combination clinical trials	3
A model for analyzing clustered occurrence data	3
A Novel Bayesian Functional Spatial Partitioning Method with Application to Prostate Cancer Lesion Detection Using MRI	3
Debiased lasso for generalized linear models with a diverging number of covariates	3
Random effects models of lymph node metastases in breast cancer: quantifying the roles of covariates and screening using a continuous growth model	3
Tractable Bayes of Skew-Elliptical Link Models for Correlated Binary Data	2
Robust Approach to Combining Multiple Markers to Improve Surrogacy	2
	2
A General Framework of Nonparametric Feature Selection in High-Dimensional Data	2
Posttreatment Confounding in Causal Mediation Studies: A Cutting-Edge Problem and a Novel Solution via Sensitivity Analysis	2
Functional additive models for optimizing individualized treatment rules	2
Discussion on “Predictively consistent prior effective sample sizes,” by Beat Neuenschwander, Sebastian Weber, Heinz Schmidli, and Anthony O'Hagan	2
Re‐calibrating pure risk integrating individual data from two‐phase studies with external summary statistics	2
Modeling dynamic correlation in zero‐inflated bivariate count data with applications to single‐cell RNA sequencing data	2
Discussion on “distributional independent component analysis for diverse neuroimaging modalities” by Ben Wu, Subhadip Pal, Jian Kang, and Ying Guo	2
Imputation-Based Q-Learning for Optimizing Dynamic Treatment Regimes with Right-Censored Survival Outcome	2
Exact-Corrected Confidence Interval for Risk Difference in Noninferiority Binomial Trials	2
Poisson PCA: Poisson measurement error corrected PCA, with application to microbiome data	2
A Bayesian multivariate mixture model for skewed longitudinal data with intermittent missing observations: An application to infant motor development	2
Transporting stochastic direct and indirect effects to new populations	2
A Bayesian approach to restricted latent class models for scientifically structured clustering of multivariate binary outcomes	2
Biased estimation with shared parameter models in the presence of competing dropout mechanisms	2
Interim monitoring in sequential multiple assignment randomized trials	2
Integrative analysis of multiple case‐control studies	2
Additive Subdistribution Hazards Regression for Competing Risks Data in Case-Cohort Studies	2
Determination and estimation of optimal quarantine duration for infectious diseases with application to data analysis of COVID‐19	2
Screening Methods for Linear Errors-in-Variables Models in High Dimensions	2
Addressing patient heterogeneity in disease predictive model development	2
Regression with interval‐censored covariates: Application to cross‐sectional incidence estimation	2
Iterated multisource exchangeability models for individualized inference with an application to mobile sensor data	2
Human disease clinical treatment network for the elderly: analysis of the medicare inpatient length of stay and readmission data	2
Estimating Tree-Based Dynamic Treatment Regimes Using Observational Data with Restricted Treatment Sequences	2
Simultaneous spatial smoothing and outlier detection using penalized regression, with application to childhood obesity surveillance from electronic health records	2
On using electronic health records to improve optimal treatment rules in randomized trials	2
Tensor envelope mixture model for simultaneous clustering and multiway dimension reduction	2
Maximum likelihood abundance estimation from capture‐recapture data when covariates are missing at random	2
Bayesian Spatiotemporal Modeling on Complex-Valued fMri Signals via Kernel Convolutions	2
	2
Information Criteria for Detecting Change-Points in the Cox Proportional Hazards Model	2
Dynamic logistic state space prediction model for clinical decision making	2
Inverse probability weighted estimators of vaccine effects accommodating partial interference and censoring	2
Solutions for Surrogacy Validation with Longitudinal Outcomes for a Gene Therapy	2
Increasing Efficiency and Reducing Bias When Assessing HPV Vaccination Efficacy by Using Nontargeted HPV Strains	2
Variable Selection in Regression-Based Estimation of Dynamic Treatment Regimes	2
A consistent version of distance covariance for right‐censored survival data and its application in hypothesis testing	2
Estimation of Time-Specific Intervention Effects on Continuously Distributed Time-to-Event Outcomes by Targeted Maximum Likelihood Estimation	2
Small‐sample inference for cluster‐based outcome‐dependent sampling schemes in resource‐limited settings: Investigating low birthweight in Rwanda	2
Testing tumors from different anatomic sites for clonal relatedness using somatic mutation data	2